Basic Information | |||
Gene ID | 403170 | ||
Gene Name | HMGB1 | ||
Full Name | High mobility group protein B1 | ||
Organism | Canis familiaris [9615] |
Cross Reference | |||
UniProt | Q6YKA4 | UniGene | Cfa.416 |
PDB | NULL | OMIM | NULL |
KEGG | cfa:403170 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 9615.ENSCAFP00000009862 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001002937 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 78 | 9.50e-30 | High mobility group box domain |
NP_001002937 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 93 | 168 | 6.60e-32 | High mobility group box domain |
NP_001002937 | Pfam | PF00505 | IPR009071 | 95 | 163 | 3.80e-27 | High mobility group box domain |
NP_001002937 | Pfam | PF09011 | IPR009071 | 6 | 78 | 3.90e-27 | High mobility group box domain |
NP_001002937 | ProSitePatterns | PS00353 | IPR017967 | 41 | 52 | - | HMG box A DNA-binding domain, conserved site |
NP_001002937 | ProSiteProfiles | PS50118 | IPR009071 | 95 | 163 | 0.00e-00 | High mobility group box domain |
NP_001002937 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 79 | 0.00e-00 | High mobility group box domain |
NP_001002937 | SMART | SM00398 | IPR009071 | 8 | 80 | 2.80e-28 | High mobility group box domain |
NP_001002937 | SMART | SM00398 | IPR009071 | 94 | 164 | 1.30e-32 | High mobility group box domain |
NP_001002937 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 81 | 0.00e-00 | High mobility group box domain |
NP_001002937 | SUPERFAMILY | SSF47095 | IPR009071 | 78 | 164 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001002937 | PF09011 | 2.59941e-42 | HMG_box_2 | HMG-box domain |
NP_001002937 | PF00505 | 6.19934e-42 | HMG_box | HMG (high mobility group) box |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001002937 | GO:0005634 | cellular_component | nucleus |
NP_001002937 | GO:0005694 | cellular_component | chromosome |
NP_001002937 | GO:0003677 | molecular_function | DNA binding |