Basic Information
Gene ID 493228
Gene Name sox3
Full Name Transcription factor Sox-3
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q68FA4 UniGene Str.27268
PDB NULL OMIM NULL
KEGG xtr:493228 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000016558

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001007502 Gene3D G3DSA:1.10.30.10 IPR009071 38 118 3.50e-40 High mobility group box domain
NP_001007502 Pfam PF00505 IPR009071 40 108 9.50e-27 High mobility group box domain
NP_001007502 Pfam PF12336 IPR022097 109 189 9.70e-35 Transcription factor SOX
NP_001007502 ProSiteProfiles PS50118 IPR009071 40 108 0.00e-00 High mobility group box domain
NP_001007502 SMART SM00398 IPR009071 39 109 9.30e-32 High mobility group box domain
NP_001007502 SUPERFAMILY SSF47095 IPR009071 25 112 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001007502 PF12336 9.7e-35 SOXp SOX transcription factor
NP_001007502 PF00505 4.8e-27 HMG_box HMG (high mobility group) box
NP_001007502 PF09011 2.9e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001007502 GO:0006351 biological_process transcription, DNA-templated
NP_001007502 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_001007502 GO:0007275 biological_process multicellular organismal development
NP_001007502 GO:0005634 cellular_component nucleus
NP_001007502 GO:0003677 molecular_function DNA binding
NP_001007502 GO:0043565 molecular_function sequence-specific DNA binding