Basic Information
Gene ID 549258
Gene Name pou3f1; TTpA009b07.1
Full Name POU domain, class 3, transcription factor 1
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q4QQQ7 UniGene Str.25752
PDB NULL OMIM NULL
KEGG xtr:549258 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000025161

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001016504 Gene3D G3DSA:1.10.10.60 IPR009057 268 343 2.30e-22 Homeodomain-like
NP_001016504 Gene3D G3DSA:1.10.260.40 IPR010982 200 267 5.90e-41 Lambda repressor-like, DNA-binding domain
NP_001016504 Pfam PF00046 IPR001356 287 343 6.40e-18 Homeobox domain
NP_001016504 Pfam PF00157 IPR000327 195 268 3.50e-39 POU-specific
NP_001016504 PIRSF PIRSF002629 IPR016362 1 375 2.00e-204 Transcription factor, homeobox/POU
NP_001016504 PRINTS PR00028 IPR013847 213 230 2.20e-46 POU domain
NP_001016504 PRINTS PR00028 IPR013847 236 249 2.20e-46 POU domain
NP_001016504 PRINTS PR00028 IPR013847 252 267 2.20e-46 POU domain
NP_001016504 PRINTS PR00028 IPR013847 285 305 2.20e-46 POU domain
NP_001016504 PRINTS PR00028 IPR013847 320 335 2.20e-46 POU domain
NP_001016504 ProSitePatterns PS00027 IPR017970 319 342 - Homeobox, conserved site
NP_001016504 ProSitePatterns PS00035 IPR000327 212 224 - POU-specific
NP_001016504 ProSitePatterns PS00465 IPR000327 236 249 - POU-specific
NP_001016504 ProSiteProfiles PS50071 IPR001356 284 344 0.00e-00 Homeobox domain
NP_001016504 ProSiteProfiles PS51179 IPR000327 194 268 0.00e-00 POU-specific
NP_001016504 SMART SM00352 IPR000327 194 268 4.20e-55 POU-specific
NP_001016504 SMART SM00389 IPR001356 286 348 1.50e-21 Homeobox domain
NP_001016504 SUPERFAMILY SSF46689 IPR009057 283 346 0.00e-00 Homeodomain-like
NP_001016504 SUPERFAMILY SSF47413 IPR010982 200 268 0.00e-00 Lambda repressor-like, DNA-binding domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001016504 PF00157 1.6e-39 Pou Pou domain - N-terminal to homeobox domain
NP_001016504 PF00046 2.1e-18 Homeobox Homeobox domain
NP_001016504 PF13560 0.00036 HTH_31 Helix-turn-helix domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001016504 GO:0006351 biological_process transcription, DNA-templated
NP_001016504 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_001016504 GO:0007275 biological_process multicellular organismal development
NP_001016504 GO:0005634 cellular_component nucleus
NP_001016504 GO:0003677 molecular_function DNA binding
NP_001016504 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
NP_001016504 GO:0043565 molecular_function sequence-specific DNA binding