Basic Information
Gene ID 594908
Gene Name irf6; TGas048b14.1-001
Full Name Novel protein similar to interferon regulatory factor transcription factor
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q28ET3 UniGene Str.27545
PDB NULL OMIM NULL
KEGG xtr:594908 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000040424

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSXETP00000040424 Gene3D G3DSA:1.10.10.10 IPR011991 3 113 1.90e-45 Winged helix-turn-helix DNA-binding domain
ENSXETP00000040424 Gene3D G3DSA:2.60.200.10 IPR017855 204 441 4.40e-89 SMAD domain-like
ENSXETP00000040424 Pfam PF00605 IPR001346 7 114 6.30e-48 Interferon regulatory factor DNA-binding domain
ENSXETP00000040424 Pfam PF10401 IPR019471 214 398 1.90e-65 Interferon regulatory factor-3
ENSXETP00000040424 PRINTS PR00267 IPR001346 35 48 6.90e-27 Interferon regulatory factor DNA-binding domain
ENSXETP00000040424 PRINTS PR00267 IPR001346 53 70 6.90e-27 Interferon regulatory factor DNA-binding domain
ENSXETP00000040424 PRINTS PR00267 IPR001346 76 98 6.90e-27 Interferon regulatory factor DNA-binding domain
ENSXETP00000040424 PRINTS PR00267 IPR001346 9 28 6.90e-27 Interferon regulatory factor DNA-binding domain
ENSXETP00000040424 ProSitePatterns PS00601 IPR019817 28 61 - Interferon regulatory factor, conserved site
ENSXETP00000040424 ProSiteProfiles PS51507 IPR001346 7 115 0.00e-00 Interferon regulatory factor DNA-binding domain
ENSXETP00000040424 SMART SM00348 IPR001346 3 116 2.50e-68 Interferon regulatory factor DNA-binding domain
ENSXETP00000040424 SUPERFAMILY SSF49879 IPR008984 206 434 0.00e-00 SMAD/FHA domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSXETP00000040424 PF00605 0 IRF Interferon regulatory factor transcription factor
ENSXETP00000040424 PF10401 0 IRF-3 Interferon-regulatory factor 3

Gene Ontology Annotation
Protein Entry Name Space Description
ENSXETP00000040424 GO:0006351 biological_process transcription, DNA-templated
ENSXETP00000040424 GO:0005634 cellular_component nucleus
ENSXETP00000040424 GO:0005737 cellular_component cytoplasm
ENSXETP00000040424 GO:0000975 molecular_function regulatory region DNA binding
ENSXETP00000040424 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7955 Danio rerio ENSDARG00000045661 9365 Erinaceus europaeus ENSEEUG00000003813
69293 Gasterosteus aculeatus ENSGACG00000000990 42254 Sorex araneus ENSSARG00000006061
9358 Choloepus hoffmanni ENSCHOG00000010399 37347 Tupaia belangeri ENSTBEG00000017451

Paralogs
ENSXETG00000018661