Basic Information
Gene ID 689988 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Sox12
Full Name Protein Sox12
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZZ13 UniGene Rn.224641
PDB NULL OMIM NULL
KEGG rno:689988 UCSC RGD:1586313

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000009852 Gene3D G3DSA:1.10.30.10 IPR009071 39 117 9.40e-35 High mobility group box domain
ENSRNOP00000009852 Pfam PF00505 IPR009071 40 108 1.50e-24 High mobility group box domain
ENSRNOP00000009852 PIRSF PIRSF038098 IPR017386 1 314 2.60e-154 Transcription factor SOX-12/11/4a
ENSRNOP00000009852 ProSiteProfiles PS50118 IPR009071 40 108 0.00e-00 High mobility group box domain
ENSRNOP00000009852 SMART SM00398 IPR009071 39 109 4.40e-32 High mobility group box domain
ENSRNOP00000009852 SUPERFAMILY SSF47095 IPR009071 29 112 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000009852 PF00505 1.5e-25 HMG_box HMG (high mobility group) box
ENSRNOP00000009852 PF09011 2e-08 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000009852 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000009852 GO:0005634 cellular_component nucleus
ENSRNOP00000009852 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100571300 30195 Bombus terrestris 100647727
7227 Drosophila melanogaster 37822 9615 Canis familiaris 485820
6087 Hydra magnipapillata 100212529 10224 Saccoglossus kowalevskii 100303598
9483 Callithrix jacchus 100388067 8128 Oreochromis niloticus 100692790
132113 Bombus impatiens 100743868 9597 Pan paniscus 100986358
9555 Papio anubis 100999725 39432 Saimiri boliviensis 101034683
8083 Xiphophorus maculatus 102221674 7897 Latimeria chalumnae 102352860
13735 Pelodiscus sinensis 102449995 10090 Mus musculus 20667
7955 Danio rerio 562381 7668 Strongylocentrotus purpuratus 593520
7070 Tribolium castaneum 661892 9606 Homo sapiens 6666
28377 Anolis carolinensis ENSACAG00000008177 9646 Ailuropoda melanoleuca ENSAMEG00000014001
10141 Cavia porcellus ENSCPOG00000010342 69293 Gasterosteus aculeatus ENSGACG00000009053
9595 Gorilla gorilla ENSGGOG00000012319 9785 Loxodonta africana ENSLAFG00000018401
13616 Monodelphis domestica ENSMODG00000019507 9669 Mustela putorius furo ENSMPUG00000004933
61853 Nomascus leucogenys ENSNLEG00000009528 30611 Otolemur garnettii ENSOGAG00000024255
9813 Procavia capensis ENSPCAG00000014259 7757 Petromyzon marinus ENSPMAG00000010355
9601 Pongo abelii ENSPPYG00000016272 9598 Pan troglodytes ENSPTRG00000030670
132908 Pteropus vampyrus ENSPVAG00000000181 31033 Takifugu rubripes ENSTRUG00000011266
8364 Xenopus tropicalis ENSXETG00000024011 9544 Macaca mulatta 706531
9913 Bos taurus ENSBTAG00000046556 9358 Choloepus hoffmanni ENSCHOG00000002300
10020 Dipodomys ordii ENSDORG00000006502 9796 Equus caballus ENSECAG00000013507
9365 Erinaceus europaeus ENSEEUG00000003666 9031 Gallus gallus ENSGALG00000016397
8049 Gadus morhua ENSGMOG00000001228 9315 Macropus eugenii ENSMEUG00000016448
9258 Ornithorhynchus anatinus ENSOANG00000011128 8090 Oryzias latipes ENSORLG00000005001
9305 Sarcophilus harrisii ENSSHAG00000004381 9823 Sus scrofa ENSSSCG00000021920
59729 Taeniopygia guttata ENSTGUG00000012987 99883 Tetraodon nigroviridis ENSTNIG00000009265
9739 Tursiops truncatus ENSTTRG00000008502