Basic Information
Gene ID 778568
Gene Name Ci-COUP; coup
Full Name Nuclear receptor
Organism Ciona intestinalis [7719]

Cross Reference
UniProt Q4H3S1 UniGene Cin.22502
PDB NULL OMIM NULL
KEGG cin:778568 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7719.ENSCINP00000004102

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSCINP00000004102 Gene3D G3DSA:1.10.565.10 IPR008946 178 404 1.10e-97 Nuclear hormone receptor, ligand-binding
ENSCINP00000004102 Gene3D G3DSA:3.30.50.10 IPR013088 76 154 1.70e-32 Zinc finger, NHR/GATA-type
ENSCINP00000004102 Pfam PF00104 IPR000536 207 387 9.30e-38 Nuclear hormone receptor, ligand-binding, core
ENSCINP00000004102 Pfam PF00105 IPR001628 78 146 3.30e-30 Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 PRINTS PR00047 IPR001628 128 136 3.50e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 PRINTS PR00047 IPR001628 136 144 3.50e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 PRINTS PR00047 IPR001628 79 95 3.50e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 PRINTS PR00047 IPR001628 95 110 3.50e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 PRINTS PR00398 IPR001723 140 150 1.30e-31 Steroid hormone receptor
ENSCINP00000004102 PRINTS PR00398 IPR001723 217 238 1.30e-31 Steroid hormone receptor
ENSCINP00000004102 PRINTS PR00398 IPR001723 238 254 1.30e-31 Steroid hormone receptor
ENSCINP00000004102 PRINTS PR00398 IPR001723 306 321 1.30e-31 Steroid hormone receptor
ENSCINP00000004102 PRINTS PR00398 IPR001723 363 380 1.30e-31 Steroid hormone receptor
ENSCINP00000004102 PRINTS PR01282 IPR003068 147 159 4.00e-63 Transcription factor COUP
ENSCINP00000004102 PRINTS PR01282 IPR003068 180 195 4.00e-63 Transcription factor COUP
ENSCINP00000004102 PRINTS PR01282 IPR003068 210 226 4.00e-63 Transcription factor COUP
ENSCINP00000004102 PRINTS PR01282 IPR003068 264 282 4.00e-63 Transcription factor COUP
ENSCINP00000004102 PRINTS PR01282 IPR003068 322 334 4.00e-63 Transcription factor COUP
ENSCINP00000004102 PRINTS PR01282 IPR003068 369 382 4.00e-63 Transcription factor COUP
ENSCINP00000004102 PRINTS PR01282 IPR003068 389 400 4.00e-63 Transcription factor COUP
ENSCINP00000004102 PRINTS PR01282 IPR003068 400 413 4.00e-63 Transcription factor COUP
ENSCINP00000004102 ProSitePatterns PS00031 IPR001628 79 105 - Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 ProSiteProfiles PS51030 IPR001628 76 151 0.00e-00 Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 SMART SM00399 IPR001628 76 147 1.20e-39 Zinc finger, nuclear hormone receptor-type
ENSCINP00000004102 SMART SM00430 IPR000536 216 375 3.10e-46 Nuclear hormone receptor, ligand-binding, core
ENSCINP00000004102 SUPERFAMILY SSF48508 IPR008946 141 401 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSCINP00000004102 PF00104 6.1e-38 Hormone_recep Ligand-binding domain of nuclear hormone receptor
ENSCINP00000004102 PF00105 3.3e-30 zf-C4 Zinc finger, C4 type (two domains)

Gene Ontology Annotation
Protein Entry Name Space Description
ENSCINP00000004102 GO:0005634 cellular_component nucleus
ENSCINP00000004102 GO:0003707 molecular_function steroid hormone receptor activity
ENSCINP00000004102 GO:0004879 molecular_function ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
ENSCINP00000004102 GO:0008270 molecular_function zinc ion binding
ENSCINP00000004102 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
132113 Bombus impatiens 100749842 143995 Megachile rotundata 100877619
34638 Metaseiulus occidentalis 100899839 30611 Otolemur garnettii 100945038
9555 Papio anubis 100999571 39432 Saimiri boliviensis 101053260
31033 Takifugu rubripes 101077067 8090 Oryzias latipes 101172490
43179 Ictidomys tridecemlineatus 101961315 7897 Latimeria chalumnae 102366416
7955 Danio rerio 393564 7227 Drosophila melanogaster 41491
9598 Pan troglodytes 461753 7070 Tribolium castaneum 655884
7425 Nasonia vitripennis 100114206 9823 Sus scrofa 100153983
7029 Acyrthosiphon pisum 100164500 6087 Hydra magnipapillata 100212284
10224 Saccoglossus kowalevskii 100303463 9986 Oryctolagus cuniculus 100346572
9483 Callithrix jacchus 100410206 30195 Bombus terrestris 100650869
9785 Loxodonta africana 100654139 10029 Cricetulus griseus 100752298
9597 Pan paniscus 100983335 9595 Gorilla gorilla 101147687
8083 Xiphophorus maculatus 102233144 13735 Pelodiscus sinensis 102451596
10090 Mus musculus 13865 9031 Gallus gallus 386585
7668 Strongylocentrotus purpuratus 576939 9606 Homo sapiens 6256
28377 Anolis carolinensis ENSACAG00000013324 9646 Ailuropoda melanoleuca ENSAMEG00000003437
9913 Bos taurus ENSBTAG00000017599 9615 Canis familiaris ENSCAFG00000010911
9358 Choloepus hoffmanni ENSCHOG00000005980 10141 Cavia porcellus ENSCPOG00000005883
51511 Ciona savignyi ENSCSAVG00000007831 10020 Dipodomys ordii ENSDORG00000013299
9796 Equus caballus ENSECAG00000008381 9371 Echinops telfairi ENSETEG00000011163
9685 Felis catus ENSFCAG00000029941 69293 Gasterosteus aculeatus ENSGACG00000010385
8049 Gadus morhua ENSGMOG00000000791 9315 Macropus eugenii ENSMEUG00000000528
59463 Myotis lucifugus ENSMLUG00000015036 9544 Macaca mulatta ENSMMUG00000006209
9669 Mustela putorius furo ENSMPUG00000004135 61853 Nomascus leucogenys ENSNLEG00000013901
9258 Ornithorhynchus anatinus ENSOANG00000009426 9813 Procavia capensis ENSPCAG00000009765
7757 Petromyzon marinus ENSPMAG00000000046 132908 Pteropus vampyrus ENSPVAG00000014744
42254 Sorex araneus ENSSARG00000003856 37347 Tupaia belangeri ENSTBEG00000003339
99883 Tetraodon nigroviridis ENSTNIG00000001348 9478 Tarsius syrichta ENSTSYG00000005234
8364 Xenopus tropicalis ENSXETG00000011594 9365 Erinaceus europaeus ENSEEUG00000002871
9103 Meleagris gallopavo ENSMGAG00000006819 30608 Microcebus murinus ENSMICG00000005642
13616 Monodelphis domestica ENSMODG00000012819 8128 Oreochromis niloticus ENSONIG00000015133
9978 Ochotona princeps ENSOPRG00000007766 9601 Pongo abelii ENSPPYG00000015629
10116 Rattus norvegicus ENSRNOG00000014795 9305 Sarcophilus harrisii ENSSHAG00000015410
59729 Taeniopygia guttata ENSTGUG00000000713 9739 Tursiops truncatus ENSTTRG00000001519