Basic Information | |||
Gene ID | ENSGACG00000010931 | ||
Gene Name | SOX13 | ||
Full Name | Uncharacterized protein | ||
Organism | Gasterosteus aculeatus [69293] |
Cross Reference | |||
UniProt | G3PA36 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSGACP00000014460 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 419 | 499 | 3.10e-33 | High mobility group box domain |
ENSGACP00000014460 | Pfam | PF00505 | IPR009071 | 420 | 488 | 3.90e-22 | High mobility group box domain |
ENSGACP00000014460 | ProSiteProfiles | PS50118 | IPR009071 | 420 | 488 | 0.00e-00 | High mobility group box domain |
ENSGACP00000014460 | SMART | SM00398 | IPR009071 | 419 | 489 | 6.00e-30 | High mobility group box domain |
ENSGACP00000014460 | SUPERFAMILY | SSF47095 | IPR009071 | 409 | 492 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSGACP00000014460 | PF00505 | 1.4e-22 | HMG_box | HMG (high mobility group) box |
ENSGACP00000014460 | PF09011 | 1.2e-08 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSGACP00000014460 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSGACP00000014460 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSGACP00000014460 | GO:0005634 | cellular_component | nucleus |
ENSGACP00000014460 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10029 | Cricetulus griseus | 100763409 | 9305 | Sarcophilus harrisii | 100929833 |
39432 | Saimiri boliviensis | 101036035 | 10090 | Mus musculus | 20668 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000000885 | 9615 | Canis familiaris | ENSCAFG00000009614 |
7955 | Danio rerio | ENSDARG00000030297 | 10020 | Dipodomys ordii | ENSDORG00000003409 |
9796 | Equus caballus | ENSECAG00000012249 | 9365 | Erinaceus europaeus | ENSEEUG00000000993 |
59463 | Myotis lucifugus | ENSMLUG00000016734 | 8128 | Oreochromis niloticus | ENSONIG00000020233 |
9739 | Tursiops truncatus | ENSTTRG00000008767 | 8083 | Xiphophorus maculatus | ENSXMAG00000008855 |
8049 | Gadus morhua | ENSGMOG00000004316 | 7897 | Latimeria chalumnae | ENSLACG00000008711 |
9315 | Macropus eugenii | ENSMEUG00000005847 | 13616 | Monodelphis domestica | ENSMODG00000001192 |
8090 | Oryzias latipes | ENSORLG00000012066 | 132908 | Pteropus vampyrus | ENSPVAG00000013711 |
99883 | Tetraodon nigroviridis | ENSTNIG00000007374 | 31033 | Takifugu rubripes | ENSTRUG00000000156 |
Paralogs | |||
ENSGACG00000019075 |