Basic Information | |||
Gene ID | ENSRNOG00000003595 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Lhx4 | ||
Full Name | Protein Lhx4 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | F1LZ08 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | RGD:1308044 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000060479 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 119 | 160 | 1.70e-10 | Homeodomain-like |
ENSRNOP00000060479 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 35 | 84 | 6.40e-15 | Zinc finger, LIM-type |
ENSRNOP00000060479 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 4 | 34 | 9.20e-05 | Zinc finger, LIM-type |
ENSRNOP00000060479 | Pfam | PF00046 | IPR001356 | 118 | 153 | 2.10e-09 | Homeobox domain |
ENSRNOP00000060479 | Pfam | PF00412 | IPR001781 | 28 | 85 | 1.70e-16 | Zinc finger, LIM-type |
ENSRNOP00000060479 | ProSitePatterns | PS00027 | IPR017970 | 129 | 152 | - | Homeobox, conserved site |
ENSRNOP00000060479 | ProSitePatterns | PS00478 | IPR001781 | 28 | 63 | - | Zinc finger, LIM-type |
ENSRNOP00000060479 | ProSiteProfiles | PS50023 | IPR001781 | 26 | 89 | 0.00e-00 | Zinc finger, LIM-type |
ENSRNOP00000060479 | ProSiteProfiles | PS50071 | IPR001356 | 129 | 154 | 0.00e-00 | Homeobox domain |
ENSRNOP00000060479 | SMART | SM00132 | IPR001781 | 27 | 82 | 1.10e-19 | Zinc finger, LIM-type |
ENSRNOP00000060479 | SMART | SM00389 | IPR001356 | 108 | 158 | 6.40e-06 | Homeobox domain |
ENSRNOP00000060479 | SUPERFAMILY | SSF46689 | IPR009057 | 118 | 158 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000060479 | PF00412 | 3e-19 | LIM | LIM domain |
ENSRNOP00000060479 | PF00046 | 1.1e-09 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000060479 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000060479 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000060479 | GO:0008270 | molecular_function | zinc ion binding |
ENSRNOP00000060479 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100051084 | 10224 | Saccoglossus kowalevskii | 100303523 |
9483 | Callithrix jacchus | 100414118 | 9601 | Pongo abelii | 100442936 |
9785 | Loxodonta africana | 100674904 | 8128 | Oreochromis niloticus | 100706090 |
10029 | Cricetulus griseus | 100750849 | 9305 | Sarcophilus harrisii | 100929025 |
9555 | Papio anubis | 101023804 | 39432 | Saimiri boliviensis | 101043410 |
31033 | Takifugu rubripes | 101073088 | 9595 | Gorilla gorilla | 101146924 |
8090 | Oryzias latipes | 101165225 | 9669 | Mustela putorius furo | 101675371 |
59463 | Myotis lucifugus | 102430726 | 9913 | Bos taurus | 539213 |
7955 | Danio rerio | 571943 | 7070 | Tribolium castaneum | 662120 |
9606 | Homo sapiens | 89884 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000003556 |
9358 | Choloepus hoffmanni | ENSCHOG00000012355 | 10020 | Dipodomys ordii | ENSDORG00000014432 |
9365 | Erinaceus europaeus | ENSEEUG00000013869 | 9685 | Felis catus | ENSFCAG00000005479 |
69293 | Gasterosteus aculeatus | ENSGACG00000010846 | 8049 | Gadus morhua | ENSGMOG00000013733 |
9103 | Meleagris gallopavo | ENSMGAG00000002905 | 9544 | Macaca mulatta | ENSMMUG00000012050 |
13616 | Monodelphis domestica | ENSMODG00000006371 | 61853 | Nomascus leucogenys | ENSNLEG00000015953 |
9258 | Ornithorhynchus anatinus | ENSOANG00000000969 | 9978 | Ochotona princeps | ENSOPRG00000009780 |
9813 | Procavia capensis | ENSPCAG00000011090 | 13735 | Pelodiscus sinensis | ENSPSIG00000010498 |
9598 | Pan troglodytes | ENSPTRG00000001740 | 132908 | Pteropus vampyrus | ENSPVAG00000002969 |
30611 | Otolemur garnettii | 100944641 | 9597 | Pan paniscus | 100968751 |
8083 | Xiphophorus maculatus | 102219891 | 9031 | Gallus gallus | 776024 |
28377 | Anolis carolinensis | ENSACAG00000000857 | 9615 | Canis familiaris | ENSCAFG00000012750 |
9371 | Echinops telfairi | ENSETEG00000014990 | 7897 | Latimeria chalumnae | ENSLACG00000009155 |
9315 | Macropus eugenii | ENSMEUG00000002639 | 30608 | Microcebus murinus | ENSMICG00000017555 |
59729 | Taeniopygia guttata | ENSTGUG00000006385 | 9823 | Sus scrofa | ENSSSCG00000015536 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000015761 | 99883 | Tetraodon nigroviridis | ENSTNIG00000015501 |
9739 | Tursiops truncatus | ENSTTRG00000012291 | 30538 | Vicugna pacos | ENSVPAG00000010060 |
8364 | Xenopus tropicalis | ENSXETG00000034077 |