Basic Information | |||
Gene ID | ENSRNOG00000017030 ; ![]() ![]() | ||
Gene Name | Arid1b | ||
Full Name | Protein Arid1b | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | F1LNP1 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000022939 | Gene3D | G3DSA:1.10.150.60 | IPR001606 | 547 | 666 | 3.80e-41 | ARID/BRIGHT DNA-binding domain |
ENSRNOP00000022939 | Pfam | PF01388 | IPR001606 | 563 | 651 | 9.70e-28 | ARID/BRIGHT DNA-binding domain |
ENSRNOP00000022939 | Pfam | PF12031 | IPR021906 | 1441 | 1697 | 6.10e-149 | Protein of unknown function DUF3518 |
ENSRNOP00000022939 | ProSiteProfiles | PS51011 | IPR001606 | 564 | 655 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
ENSRNOP00000022939 | SMART | SM00501 | IPR001606 | 565 | 656 | 5.20e-44 | ARID/BRIGHT DNA-binding domain |
ENSRNOP00000022939 | SUPERFAMILY | SSF46774 | IPR001606 | 551 | 662 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000022939 | PF12031 | 0 | DUF3518 | Domain of unknown function (DUF3518) |
ENSRNOP00000022939 | PF01388 | 4.5e-28 | ARID | ARID/BRIGHT DNA binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000022939 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000022939 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000022939 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100115246 | 400682 | Amphimedon queenslandica | 100641060 |
30195 | Bombus terrestris | 100651892 | 132113 | Bombus impatiens | 100748451 |
9597 | Pan paniscus | 100973216 | 9555 | Papio anubis | 100998708 |
39432 | Saimiri boliviensis | 101044635 | 9669 | Mustela putorius furo | 101687963 |
7227 | Drosophila melanogaster | 42130 | 7668 | Strongylocentrotus purpuratus | 580818 |
28377 | Anolis carolinensis | ENSACAG00000005132 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000009707 |
9913 | Bos taurus | ENSBTAG00000002728 | 9615 | Canis familiaris | ENSCAFG00000000608 |
9358 | Choloepus hoffmanni | ENSCHOG00000002595 | 9483 | Callithrix jacchus | ENSCJAG00000012474 |
51511 | Ciona savignyi | ENSCSAVG00000009746 | 7955 | Danio rerio | ENSDARG00000092503 |
9361 | Dasypus novemcinctus | ENSDNOG00000024984 | 10020 | Dipodomys ordii | ENSDORG00000014985 |
9796 | Equus caballus | ENSECAG00000000518 | 9365 | Erinaceus europaeus | ENSEEUG00000012445 |
9371 | Echinops telfairi | ENSETEG00000009016 | 9685 | Felis catus | ENSFCAG00000006278 |
69293 | Gasterosteus aculeatus | ENSGACG00000007627 | 9031 | Gallus gallus | ENSGALG00000013683 |
8049 | Gadus morhua | ENSGMOG00000020580 | 7897 | Latimeria chalumnae | ENSLACG00000013893 |
9785 | Loxodonta africana | ENSLAFG00000012011 | 9103 | Meleagris gallopavo | ENSMGAG00000012797 |
30608 | Microcebus murinus | ENSMICG00000008595 | 59463 | Myotis lucifugus | ENSMLUG00000011428 |
9544 | Macaca mulatta | ENSMMUG00000002270 | 13616 | Monodelphis domestica | ENSMODG00000008068 |
61853 | Nomascus leucogenys | ENSNLEG00000015656 | 9258 | Ornithorhynchus anatinus | ENSOANG00000014884 |
9978 | Ochotona princeps | ENSOPRG00000013312 | 8090 | Oryzias latipes | ENSORLG00000017229 |
13735 | Pelodiscus sinensis | ENSPSIG00000009413 | 9598 | Pan troglodytes | ENSPTRG00000018733 |
6087 | Hydra magnipapillata | 100209641 | 7460 | Apis mellifera | 412046 |
9606 | Homo sapiens | 57492 | 9595 | Gorilla gorilla | ENSGGOG00000011723 |
9986 | Oryctolagus cuniculus | ENSOCUG00000008879 | 8128 | Oreochromis niloticus | ENSONIG00000008068 |
9813 | Procavia capensis | ENSPCAG00000012896 | 9601 | Pongo abelii | ENSPPYG00000017126 |
31033 | Takifugu rubripes | ENSTRUG00000011231 | 9305 | Sarcophilus harrisii | ENSSHAG00000017851 |
9823 | Sus scrofa | ENSSSCG00000004064 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000015979 |
37347 | Tupaia belangeri | ENSTBEG00000005174 | 59729 | Taeniopygia guttata | ENSTGUG00000011113 |
99883 | Tetraodon nigroviridis | ENSTNIG00000017481 | 9739 | Tursiops truncatus | ENSTTRG00000004606 |
30538 | Vicugna pacos | ENSVPAG00000010560 | 8364 | Xenopus tropicalis | ENSXETG00000011226 |
8083 | Xiphophorus maculatus | ENSXMAG00000006338 |