Basic Information
Gene ID ENSRNOG00000018624 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Cdx1
Full Name Homeobox protein CDX-1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt F1LR94 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000025141 Gene3D G3DSA:1.10.10.60 IPR009057 124 191 1.20e-27 Homeodomain-like
ENSRNOP00000025141 Pfam PF00046 IPR001356 133 188 4.40e-21 Homeobox domain
ENSRNOP00000025141 Pfam PF04731 IPR006820 14 123 4.60e-27 Caudal-like activation domain
ENSRNOP00000025141 PRINTS PR00024 IPR020479 153 164 1.30e-06 Homeodomain, metazoa
ENSRNOP00000025141 PRINTS PR00024 IPR020479 168 178 1.30e-06 Homeodomain, metazoa
ENSRNOP00000025141 PRINTS PR00024 IPR020479 178 187 1.30e-06 Homeodomain, metazoa
ENSRNOP00000025141 PRINTS PR00031 IPR000047 160 169 2.60e-08 Helix-turn-helix motif
ENSRNOP00000025141 PRINTS PR00031 IPR000047 169 185 2.60e-08 Helix-turn-helix motif
ENSRNOP00000025141 ProSitePatterns PS00027 IPR017970 164 187 - Homeobox, conserved site
ENSRNOP00000025141 ProSiteProfiles PS50071 IPR001356 129 189 0.00e-00 Homeobox domain
ENSRNOP00000025141 SMART SM00389 IPR001356 131 193 5.10e-28 Homeobox domain
ENSRNOP00000025141 SUPERFAMILY SSF46689 IPR009057 120 191 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000025141 PF04731 2.8e-27 Caudal_act Caudal like protein activation region
ENSRNOP00000025141 PF00046 2.9e-21 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000025141 GO:0007275 biological_process multicellular organismal development
ENSRNOP00000025141 GO:0005634 cellular_component nucleus
ENSRNOP00000025141 GO:0000976 molecular_function transcription regulatory region sequence-specific DNA binding
ENSRNOP00000025141 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7463 Apis florea 100866555 9669 Mustela putorius furo 101684069
9606 Homo sapiens 1044 9544 Macaca mulatta 711837
9595 Gorilla gorilla ENSGGOG00000000106 7757 Petromyzon marinus ENSPMAG00000000895
13616 Monodelphis domestica 100024158 10224 Saccoglossus kowalevskii 100303543
9601 Pongo abelii 100461469 7029 Acyrthosiphon pisum 100574453
9823 Sus scrofa 100626834 30195 Bombus terrestris 100651931
132113 Bombus impatiens 100745452 10029 Cricetulus griseus 100764671
9597 Pan paniscus 100974625 9555 Papio anubis 101010722
39432 Saimiri boliviensis 101044201 7668 Strongylocentrotus purpuratus 584191
9615 Canis familiaris 612256 7070 Tribolium castaneum 641536
28377 Anolis carolinensis ENSACAG00000015334 9646 Ailuropoda melanoleuca ENSAMEG00000004954
9913 Bos taurus ENSBTAG00000012014 10141 Cavia porcellus ENSCPOG00000020353
51511 Ciona savignyi ENSCSAVG00000007948 9796 Equus caballus ENSECAG00000024772
9685 Felis catus ENSFCAG00000022723 9315 Macropus eugenii ENSMEUG00000007938
59463 Myotis lucifugus ENSMLUG00000008453 61853 Nomascus leucogenys ENSNLEG00000010259
9258 Ornithorhynchus anatinus ENSOANG00000002295 9986 Oryctolagus cuniculus ENSOCUG00000012479
9978 Ochotona princeps ENSOPRG00000008290 9813 Procavia capensis ENSPCAG00000008426
9598 Pan troglodytes ENSPTRG00000017411 132908 Pteropus vampyrus ENSPVAG00000001315
43179 Ictidomys tridecemlineatus ENSSTOG00000020585 9739 Tursiops truncatus ENSTTRG00000014646
30538 Vicugna pacos ENSVPAG00000010102 37347 Tupaia belangeri ENSTBEG00000001197