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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1285#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 616 fasta sequence
[TTTTTTTTTTTTTTGTTCGTTTAATAATAGAATAATAAAATAATAATAATAATAATTAATATTATAATTGATCATTGGTTTGATTAAATAAAAAATGATTCAGTTTTTGTTTACAAAAAATAAATTGAATAAGTTGCTGAAATATTTTTCATTTATTATTGCATTGTTGCATTTATTAATGCACATTCTGTGCATAGAATGCATATTTCTGTTCAAGTGTACCATCTTCTTCAGATTTCATATACTCCTTGAACATGTAAATAGTTTTCCCAATTGGACAGGACCAAGGGCAGTCTGGCGGGCGATATTATCATCACTAATCAATGCACGTGTCATGGACTCGGTAGGATTCAAGCCTGCGTGCTCTTGCTCATCGANNNAAACTTGTGTTTTTCGAAGTATATGCTTCAATTCAGTCAACTCCANNNAGTTACGTTTAAGTGTTTCTGCATTTTGATTAACTTCTCGTAATTCATTTTCTAATTTTTCAAATGTTGCTTCANGATCTATCATTTCTCTGGGTTNNNGAGCTTCTGGATTTTCTCCAGTATCGAGCATAGGAATACCATCTTTTTTAATTTCTTTTTCCAAATATCGTAATTTACGTTCCATTTCA]
[+] EMBL BI507569 [TTTTTTTTTTTTTTGTTCGTTTAATAATAGAATAATAAAATAATAATAATAATAATTAATATTATAATTGATCATTGGTTTGATTAAATAAAAAATGATTCAGTTTTTGTTTACAAAAAATAAATTGAATAAGTTGCTGAAATATTTTTCATTTATTATTGCATTGTTGCATTTATTAATGCACATTCTGTGCATAGAATGCATATTTCTGTTCAAGTGTACCATCTTCTTCAGATTTCATATACTCCTTGAACATGTAAATAGTTTTCCCAATTGGACAGGACCAAGGGCAGTCTGGCGGGCGATATTATCATCACTAATCAATGCACGTGTCATGGACTCGGTAGGATTCAAGCCTGCGTGCTCTTGCTCATCGANNNAAACTTGTGTTTTTCGAAGTATATGCTTCAATTCAGTCAACTCCANNNAGTTACGTTTAAGTGTTTCTGCATTTTGATTAACTTCTCGTAATTCATTTTCTAATTTTTCAAATGTTGCTTCANGATCTATCATTTCTCTGGGTTNNNGAGCTTCTGGATTTTCTCCAGTATCGAGCATAGGAATACCATCTTTTTTAATTTCTTTTTCCAAATATCGTAATTTACGTTCCATTTCA]
consensusID : consensus_1285#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence
[TTTGCAGCAGCTACTAAAACACGATGTCGATGATCTTGAGTTTGTCCAAGAACTGTGTTTAGATCTTCAATTCGAGTCATAACACCCATAGCCATTTCACGGCGATCAGCAGGTGCTTCAGGGCAAGGATATAAAGTTGCTCTAAATCCTTCACAAATTTTTTTAACTCGAGTTTTCAATTGATCTCCTTGGAAAAATATGATAAACACAGATTTAAAGACTTGATCTCCCGTTGAAGGATCTTCCAGAGGAGTTTCAATTTCTGCTTGACGTAGAAATACATTACCACGACATGCACGCCAAAGCATACGTTCAAATGCTGGAATACGTTCTCGTAGAATTACTCCTGCGACGAAACCGAGCTTGAGAGCCTGGCCGCCAGCGCGGAGGCCCTCTTCACCCAAGAGAGTGACTTGTTCTTCCTCACGNNTGGGGTCTGCCATCTCATCGAAGAAAACTTGTGTTTTTCGAAGTATATGCTTCAATTCAGTCAACTCCAAGAAGTTACGTTTAAGTGTTTCTGCATTTTGATTAACTTCTCGTAATTCATTTTCTAATTTTTCAAATGTTGCTTC]
[+] EMBL BI510225 [TTTGCAGCAGCTACTAAAACACGATGTCGATGATCTTGAGTTTGTCCAAGAACTGTGTTTAGATCTTCAATTCGAGTCATAACACCCATAGCCATTTCACGGCGATCAGCAGGTGCTTCAGGGCAAGGATATAAAGTTGCTCTAAATCCTTCACAAATTTTTTTAACTCGAGTTTTCAATTGATCTCCTTGGAAAAATATGATAAACACAGATTTAAAGACTTGATCTCCCGTTGAAGGATCTTCCAGAGGAGTTTCAATTTCTGCTTGACGTAGAAATACATTACCACGACATGCACGCCAAAGCATACGTTCAAATGCTGGAATACGTTCTCGTAGAATTACTCCTGCGACGAAACCGAGCTTGAGAGCCTGGCCGCCAGCGCGGAGGCCCTCTTCACCCAAGAGAGTGACTTGTTCTTCCTCACGNNTGGGGTCTGCCATCTCATCGAAGAAAACTTGTGTTTTTCGAAGTATATGCTTCAATTCAGTCAACTCCAAGAAGTTACGTTTAAGTGTTTCTGCATTTTGATTAACTTCTCGTAATTCATTTTCTAATTTTTCAAATGTTGCTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1285#0 -------------------------------------------------------TTTTT 5
consensus_1285#1 TTTGCAGCAGCTACTAAAACACGATGTCGATGATCTTGAGTTTGTCCAAGAACTGTGTTT 60
* ***
consensus_1285#0 TTTTTTTTTGTTCGTTTAATAATAGA-ATAATAAAATAATAATAATAATAA------TTA 58
consensus_1285#1 AGATCTTCAATTCGAGTCATAACACCCATAGCCATTTCACGGCGATCAGCAGGTGCTTCA 120
* ** **** * **** * *** * * * ** * * * *
consensus_1285#0 ATATTATAATTGATCATTGGTTTGATTAAATAAAAAATGATTC-AGTTTTTGTTTACAAA 117
consensus_1285#1 GGGCAAGGATATAAAGTTGCTCTAAATCCTTCACAAATTTTTTTAACTCGAGTTTTCAAT 180
* ** * *** * * * * * * **** ** * * **** ***
consensus_1285#0 AAATAAATT--GAATAAGTTGCTGAA-ATATTTTTCA---TTTATTATTGCATTGTTGCA 171
consensus_1285#1 TGATCTCCTTGGAAAAATATGATAAACACAGATTTAAAGACTTGATCTCCCGTTGAAGGA 240
** * *** ** ** * ** * * *** * ** * * * *** * *
consensus_1285#0 TTTATTAATGCACATTCTGTGCATAGAATGCATATTTCTGTTCAAGTGTACCATCTTCTT 231
consensus_1285#1 TCTTCCAGAGGAGTTTCAATTTCTGCTTGACGTAGAAATACATTACCACGACATGCACGC 300
* * * * * *** * * * ** * * *** *
consensus_1285#0 CAGATTTCATATAC---TCCTTGAACATGTAA--ATAGTTTTCCCAATTGGACAGGACCA 286
consensus_1285#1 CAAAGCATACGTTCAAATGCTGGAATACGTTCTCGTAGAATTACTCCTGCGACGAAACCG 360
** * * * * * ** *** * ** *** ** * * *** ***
consensus_1285#0 AG---GGCAGTCTGGCGGGCGATATTATCATCACTAATCAATGCACGTGTCATGGACTCG 343
consensus_1285#1 AGCTTGAGAGCCTGGCCGCCAGCGCGGAGGCC-CTCTTCA---CCCAAGAGAGTGACTTG 416
** * ** ***** * * * ** *** * * * * **** *
consensus_1285#0 GTAGGATTCAAGCCTGCGTGCTCTTG-CTCATCGANNNAAACTTGTGTTTTTCGAAGTAT 402
consensus_1285#1 TTCTTCCTCACGNNTGGGGTCTGCCATCTCATCGAAGAAAACTTGTGTTTTTCGAAGTAT 476
* *** * ** * ** ******** **********************
consensus_1285#0 ATGCTTCAATTCAGTCAACTCCANNNAGTTACGTTTAAGTGTTTCTGCATTTTGATTAAC 462
consensus_1285#1 ATGCTTCAATTCAGTCAACTCCAAGAAGTTACGTTTAAGTGTTTCTGCATTTTGATTAAC 536
*********************** **********************************
consensus_1285#0 TTCTCGTAATTCATTTTCTAATTTTTCAAATGTTGCTTCANGATCTATCATTTCTCTGGG 522
consensus_1285#1 TTCTCGTAATTCATTTTCTAATTTTTCAAATGTTGCTTC--------------------- 575
***************************************
consensus_1285#0 TTNNNGAGCTTCTGGATTTTCTCCAGTATCGAGCATAGGAATACCATCTTTTTTAATTTC 582
consensus_1285#1 ------------------------------------------------------------
consensus_1285#0 TTTTTCCAAATATCGTAATTTACGTTCCATTTCA 616
consensus_1285#1 ----------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |