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Apis mellifera
cluster # 138 cluster # 138       Sequences # 7       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_138#0 length = 1169 sequences # 6  
 consensus_138#1 length = 402 sequences # 1  
consensusID : consensus_138#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1169
fasta sequence 
                              [AGCGATAATTATCCAAGTTATCGTGTATTTATTGTTAGTATATTATTTAAGAAAATTGTGAAACTAATGATTTTTGCATTTCATTGTTGTCAAAATAATATCTGACCGTGCTCTACGTGAAACGGTGTCACGTTTCATTGGTGAAAGAAATTGTTTATTTTTCGTTTGCTGCAAATATCGGTGACAACGAAGGAAAAAGATTAACATACGGTAAAATCAAAATCGAGGAATAAGGAAAAATGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTTGTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGTTGGACAAAGTACCATGGATAGGCGAACTAGTGGGGAACGATTTGTTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAAAACTAATGAACACGCTTGAGAGGGAAATGTCGAGTTCGATGAGACTTTACGATAGTCGTAAAGCGGTTAGAGAGGCCTGGGACATGACACAGTCGAAGCTCCATTGCTGCGGTGTAAATGGTTGGAGAGATTGGGGGCTCAGTATACCGCAGNGTTGCTGTCGCGAGATTCAACCCGGACAGCGATTCAACTGTAACTCTGGACCAGACACAGTGAACCCTTCGAATGCCTATCTCGTCGGTTGCATCAATGGAACGCAGATTTACTTGCAGAAGCATGCGACGATCATGGGTGGCGCTGGTATTGCAGTCGCGTGTTTGATGTTTTTCGGCATGATTTTCTCGTGCATTCTCTTCAAGTTGATAGAATGACGGGAGAGTAGCGTGCTTTAAAAGACAACTTCGTTCTTCGTGTCTAAACTAACGAAGAGGAAGAAGTGGATGTCAGCCGTCCTCGAGCGACTCATGAATTCATAATCAATGTCATCGTCATTGAGTGCATCTAAGCTGAAGTACGAGAATCAAAATGCATCTTCACGCGCATCTTTTCAATGTACAGTTCTCACCATTTTTTCTTCTTTTCTT]

[+] EMBL BI514468             [AGCGATAATTATCCAAGTTATCGTGTATTTATTGTTAGTATATTATTTAAGAAAATTGTGAAACTAATGATTTTTGCATTTCATTGTTGTCAAAATAATATCTGACCGTGCTCTACGTGAAACGGTGTCACGTTTCATTGGTGAAAGAAATTGTTTATTTTTCGTTTGCTGCAAATATCGGTGACAACGAAGGAAAAAGATTAACATACGGTAAAATCAAAATCGAGGAATAAGGAAAAATGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTTGTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGTTGGACAAAGTACCATGGATAGGCGAACTAGTGGGGAACGATTTGTTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI512010             [AGCGATAATTATCCAAGTTATCGTGTATTTATTGTTAGTATATTATTTAAGAAAATTGTGAAACTAATGATTTTTGCATTTCATTGTTGTCAAAATAATATCTGACCGTGCTCTACGTGAAACGGTGTCACGTTTCATTGGTGAAAGAAATTGTTTATTTTTCGTTTGCTGCAAATATCGGTGACAACGAAGGAAAAAGATTAACATACGGTAAAATCAAAATCGAGGAATAAGGAAAAATGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTTGTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGTTGGACAAAGTACCATGGATAGGCGAACTAGTGGGGAACGATTTGTTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI513473             [                                                                                                                                                                                                                                                                                         AAGTATTCCTTGTTCTTTGTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGTTGGACAAAGTACCATGGATAGGCGAACTAGTGGGGAACGATTTGTTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAAAACTAATGAACACGCTTGAGAGGGAAATGTCGAGTTCGATGAGACTTTACGATAGTCGTAAAGCGGTTAGAGAGGCCTGGGACATGACACAGTCGAAGCTCCATTGCTGCGGTGTAAATGGTTGGAGAGATTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI514029             [                                                                                                                                                                                                                                                                                                                                                                                                                    TTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAAAACTAATGAACACGCTTGAGAGGGAAATGTCGAGTTCGATGAGACTTTACGATAGTCGTAAAGCGGTTAGAGAGGCCTGGGACATGACACAGTCGAAGCTCCATTGCTGCGGTGTAAATGGTTGGAGAGATTGGGGGCTCAGTATACCGCAGNGTTGCTGTCGCGAGATTCAACCCGGACAGCGATTCAACTGTAACTCTGGACCAGACACAGTGAACCCTTCGAATGCCTATCTCGTCGGTTGCATCAATGGAACGCAGATTTACTTGCAGAAGCATGCGACGATCATGGGTGGCGCTGGTATTGCAGTCGCGTGTTTGATGTTTTTCGGCATGATTTTCTCGTGCATTCTCTTC                                                                                                                                                                                                                                    ]
[+] EMBL BI514125             [                                                                                                                                                                                                                                                                                                                                                                                                                    TTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAAAACTAATGAACACGCTTGAGAGGGAAATGTCGAGTTCGATGAGACTTTACGATAGTCGTAAAGCGGTTAGAGAGGCCTGGGACATGACACAGTCGAAGCTCCATTGCTGCGGTGTAAATGGTTGGAGAGATTGGGGGCTCAGTATACCGCAGNGTTGCTGTCGCGAGATTCAACCCGGACAGCGATTCAACTGTAACTCTGGACCAGACACAGTGAACCCTTCGAATGCCTATCTCGTCGGTTGCATCAATGGAACGCAGNTTTACTTGCAGAAGCATGCGACGATCATGGGTGGCGCTG                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI507937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAAAACTAATGAACACGCTTGAGAGGGAAATGTCGAGTTCGATGAGACTTTACGATAGTCGTAAAGCGGTTAGAGAGGCCTGGGACATGACACAGTCGAAGCTCCATTGCTGCGGTGTAAATGGTTGGAGAGATTGGGGGCTCAGTATACCGCAGAGTTGCTGTCGCGAGATTCAACCCGGACAGCGATTCAACTGTAACTCTGGACCAGACACAGTGAACCCCTCGAATGCCTATCTCGTCGGTTGCATCAATGGAACGCAGATTTACTTGCAGAAGCATGCGACGATCATGGGTGGCGCTGGTATTGCAGTCGCGTGTTTGATGTTTTTCGGCATGATTTTCTCGTGCATTCTCTTCAAGTTGATAGAATGACGGGAGAGTAGCGTGCTTTAAAAGACAACTTCGTTCTTCGTGTCTAAACTAACGAAGAGGAAGAAGTGGATGTCAGCCGTCCTCGAGCGACTCATGAATTCATAATCAATGTCATCGTCATTGAGTGCATCTAAGCTGAAGTACGAGAATCAAAATGCATCTTCACGCGCATCTTTTCAATGTACAGTTCTCACCATTTTTTCTTCTTTTCTT]




>consensus_138#0
AGCGATAATTATCCAAGTTATCGTGTATTTATTGTTAGTATATTATTTAAGAAAATTGTG
AAACTAATGATTTTTGCATTTCATTGTTGTCAAAATAATATCTGACCGTGCTCTACGTGA
AACGGTGTCACGTTTCATTGGTGAAAGAAATTGTTTATTTTTCGTTTGCTGCAAATATCG
GTGACAACGAAGGAAAAAGATTAACATACGGTAAAATCAAAATCGAGGAATAAGGAAAAA
TGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTTG
TCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGT
TGGACAAAGTACCATGGATAGGCGAACTAGTGGGGAACGATTTGTTAACAGGTGCTATTT
ACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTG
CATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCG
TAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAAAACTAATGAACACGC
TTGAGAGGGAAATGTCGAGTTCGATGAGACTTTACGATAGTCGTAAAGCGGTTAGAGAGG
CCTGGGACATGACACAGTCGAAGCTCCATTGCTGCGGTGTAAATGGTTGGAGAGATTGGG
GGCTCAGTATACCGCAGNGTTGCTGTCGCGAGATTCAACCCGGACAGCGATTCAACTGTA
ACTCTGGACCAGACACAGTGAACCCTTCGAATGCCTATCTCGTCGGTTGCATCAATGGAA
CGCAGATTTACTTGCAGAAGCATGCGACGATCATGGGTGGCGCTGGTATTGCAGTCGCGT
GTTTGATGTTTTTCGGCATGATTTTCTCGTGCATTCTCTTCAAGTTGATAGAATGACGGG
AGAGTAGCGTGCTTTAAAAGACAACTTCGTTCTTCGTGTCTAAACTAACGAAGAGGAAGA
AGTGGATGTCAGCCGTCCTCGAGCGACTCATGAATTCATAATCAATGTCATCGTCATTGA
GTGCATCTAAGCTGAAGTACGAGAATCAAAATGCATCTTCACGCGCATCTTTTCAATGTA
CAGTTCTCACCATTTTTTCTTCTTTTCTT

consensusID : consensus_138#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence 
                              [GTAATGAGCGATGTTTTCTCGCAATGGCGCATGCGCAAATCGAGGAATAAGGAAAAATGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTTGTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGTTGGACAAAGTACCATGGATAGGCGAACTGGTGGGGAACGATTTGTTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAA]

[+] EMBL BI516599             [GTAATGAGCGATGTTTTCTCGCAATGGCGCATGCGCAAATCGAGGAATAAGGAAAAATGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTTGTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGTTGGACAAAGTACCATGGATAGGCGAACTGGTGGGGAACGATTTGTTAACAGGTGCTATTTACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAA]




>consensus_138#1
GTAATGAGCGATGTTTTCTCGCAATGGCGCATGCGCAAATCGAGGAATAAGGAAAAATGG
GATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTTGTCA
ACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTGTTGG
ACAAAGTACCATGGATAGGCGAACTGGTGGGGAACGATTTGTTAACAGGTGCTATTTACG
TTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGTGCAT
CTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTCGTAA
CCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_138#0      AGCGATAATTATCCAAGTTATCGTGTATTTATTGTTAGTATATTATTTAAGAAAATTGTG 60
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      AAACTAATGATTTTTGCATTTCATTGTTGTCAAAATAATATCTGACCGTGCTCTACGTGA 120
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      AACGGTGTCACGTTTCATTGGTGAAAGAAATTGTTTATTTTTCGTTTGCTGCAAATATCG 180
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      GTGACAACGAAGGAAAAAGATTAACATACGGTAAAATCA-AAATCGAGGAATAAGGAAAA 239
consensus_138#1      ---GTAATGAGCGATGTTTTCTCGCA-ATGGCGCATGCGCAAATCGAGGAATAAGGAAAA 56
                          ** **  **       *  ** * **   *  *  ********************

consensus_138#0      ATGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTT 299
consensus_138#1      ATGGGATACGGCACAGAAATGGATGGCTGCGGTCGTTGCATGAAGTATTCCTTGTTCTTT 116
                     ************************************************************

consensus_138#0      GTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTG 359
consensus_138#1      GTCAACTTAGTAATTTTCATCGGTGGAGTGGCGATAATTGGATTAGCAACGTGGGCTCTG 176
                     ************************************************************

consensus_138#0      TTGGACAAAGTACCATGGATAGGCGAACTAGTGGGGAACGATTTGTTAACAGGTGCTATT 419
consensus_138#1      TTGGACAAAGTACCATGGATAGGCGAACTGGTGGGGAACGATTTGTTAACAGGTGCTATT 236
                     ***************************** ******************************

consensus_138#0      TACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGT 479
consensus_138#1      TACGTTCTATTGGTCGCTGGGATCATCGTTGCTCTAACATCGTTCTTCGGCTGCTTGGGT 296
                     ************************************************************

consensus_138#0      GCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTC 539
consensus_138#1      GCATCTCGAGAAGTTAAATGCATGCTTCTCACGTACTTCATCATCGTGTTCCTTCTGTTC 356
                     ************************************************************

consensus_138#0      GTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAAAACTAATGAACACG 599
consensus_138#1      GTAACCATATTAATTGGCGGAGTGCTCGCGTACGTGTTCCGTGAAA-------------- 402
                     **********************************************              

consensus_138#0      CTTGAGAGGGAAATGTCGAGTTCGATGAGACTTTACGATAGTCGTAAAGCGGTTAGAGAG 659
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      GCCTGGGACATGACACAGTCGAAGCTCCATTGCTGCGGTGTAAATGGTTGGAGAGATTGG 719
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      GGGCTCAGTATACCGCAGNGTTGCTGTCGCGAGATTCAACCCGGACAGCGATTCAACTGT 779
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      AACTCTGGACCAGACACAGTGAACCCTTCGAATGCCTATCTCGTCGGTTGCATCAATGGA 839
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      ACGCAGATTTACTTGCAGAAGCATGCGACGATCATGGGTGGCGCTGGTATTGCAGTCGCG 899
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      TGTTTGATGTTTTTCGGCATGATTTTCTCGTGCATTCTCTTCAAGTTGATAGAATGACGG 959
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      GAGAGTAGCGTGCTTTAAAAGACAACTTCGTTCTTCGTGTCTAAACTAACGAAGAGGAAG 1019
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      AAGTGGATGTCAGCCGTCCTCGAGCGACTCATGAATTCATAATCAATGTCATCGTCATTG 1079
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      AGTGCATCTAAGCTGAAGTACGAGAATCAAAATGCATCTTCACGCGCATCTTTTCAATGT 1139
consensus_138#1      ------------------------------------------------------------
                                                                                 

consensus_138#0      ACAGTTCTCACCATTTTTTCTTCTTTTCTT 1169
consensus_138#1      ------------------------------


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)