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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_141#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 978 fasta sequence
[TCGACGATTTCAAGGATCTTTGATTGATGTTTTTACTTCGTTTTTTTTTTTAAATAATCGTTGGTGCCTTTCCTCTATTTCTTTCCCTTTTTTTTTTCTCTTAATTTTTACGAACGAGCTTTTCACATGTGTGGGTATATATATATATATATATGTATATTTTATATATATATATAAAATAATATTTCTCATAGAAATACGTTATTTATATTGTAGATAGATTTACTTTTTACTGAACGTATTTTTTGTAGTACATAATGAAAGAGAAAGAGGAGGATTAATGTACGCTGTGAGTACGCGAGCGCGCAGAGTCTCGTTCGAAGCGACAAGCTCTCCGCATTTTAATTGTAATCTAACTATTTTCGGGGGTTCTGACAGACGTCGAATCTATCGCTCCCCGCAATCACTGAGCATCCTTGGTCCGGAAGAATAGAATTACGAATAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCTTATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGTTTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAGAAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGCTTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCGATCCCTTCCCT--TCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAGGGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACATTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGATATGTACTCGATATTCGGTCAATGCTAAATAATTATTATCCNNNTAATTAAGAAATAAAGTGTGCTCTATGTCATGCTA]
[+] EMBL BI514039 [TCGACGATTTCAAGGATCTTTGATTGATGTTTTTACTTCGTTTTTTTTTTTAAATAATCGTTGGTGCCTTTCCTCTATTTCTTTCCCTTTTTTTTTTCTCTTAATTTTTACGAACGAGCTTTTCACATGTGTGGGTATATATATATATATATATGTATATTTTATATATATATATAAAATAATATTTCTCATAGAAATACGTTATTTATATTGTAGATAGATTTACTTTTTACTGAACGTATTTTTTGTAGTACATAATGAAAGAGAAAGAGGAGGATTAATGTACGCTGTGAGTACGCGAGCGCGCAGAGTCTCGTTCGAAGCGACAAGCTCTCCGCATTTTAATTGTAATCTAACTATTTTCGGGGGTTCTGACAGACGTCGAATCTATCGCTCCCCGCAATCACTGAGCATCCTTGGTCCGGAAGAATAGAATTA ]
[+] EMBL BI514133 [TCGACGATTTCAAGGATCTTTGATTGATGTTTTTACTTCGTTTTTTTTTTTAAATAATCGTTGGTGCCTTTCCTCTATTTCTTTCCCTTTTTTTTTTCTCTTAATTTTTACGAACGAGCTTTTCACATGTGTGGGTATATATATATATATATATGTATATTTTATATATATATATAAAATAATATTTCTCATAGAAATACGTTATTTATATTGTAGATAGATTTACTTTTTACTGAACGTATTTTTTGTAGTACATAATGAAAGAGAAAGAGGAGGATTAATGTACGCTGTG ]
[-] EMBL BI517148 [ CGCATTTTAATTGTAATCTAACTATTTTCGGGGGTTCTGACAGACGTCGAATCTATCGCTCCCCGCAATCACTGAGCATCCTTGGTCCGGAAGAATAGAATTACGAATAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCTTATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGTTTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAGAAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGCTTGCACTACTCGTTTCTTTTTTTTTCAA TTTTTTTTATATTTTTTTCTCTATCTTCCCGATCCCTTCCCT TCTTGATTCCCCATTATTCTTCCCGTTGTTCTTGAAACGAAACGCGAAGGGACGACCAGTGGATGCAACGCAGTGATAC ]
[-] EMBL BI515513 [ TATCGCTCCCCGCAATCACTGAGCATCCNTGGTCCGGAAGAATAGAATTACGAATAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCTTATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGTTTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAGAAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGCTTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCGATCCCTTCCCT TCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAGGGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACATTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGA ]
[-] EMBL BI516388 [ CGAATAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCTTATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGTTTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAGAAGCCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGCTTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCGATCCCTTCCCT TCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAGGGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACATTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGA ]
[-] EMBL BI511839 [ CCTTCCTTTCGTGTTTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAGAAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGCTTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCGATCCCTTCCCTCCTCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAGGGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACATTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGATATGTACTCGATATTCGGTCAATGCTAAATAATTATTATCCNNNTAATTAAGAAATAAAGTGTGCTCTATGTCATGCTA]
consensusID : consensus_141#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[TATTCTTCCGGACCAAGGATGCTCAGTGATTGCGATTAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCTTATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGTTTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAGAAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGCTTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCGATCCCTTCCCTTCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAGGGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACATTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGATATGTACTCGATATTCGGTCAATGCTAAATAATTATTATCACT]
[+] EMBL BI515791 [TATTCTTCCGGACCAAGGATGCTCAGTGATTGCGATTAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCTTATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGTTTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAGAAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGCTTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCGATCCCTTCCCTTCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAGGGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACATTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGATATGTACTCGATATTCGGTCAATGCTAAATAATTATTATCACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_141#0 TCGACGATTTCAAGGATCTTTGATTGATGTTTTTACTTCGTTTTTTTTTTTAAATAATCG 60
consensus_141#1 ------------------------------------------------------------
consensus_141#0 TTGGTGCCTTTCCTCTATTTCTTTCCCTTTTTTTTTTCTCTTAATTTTTACGAACGAGCT 120
consensus_141#1 ------------------------------------------------------------
consensus_141#0 TTTCACATGTGTGGGTATATATATATATATATATGTATATTTTATATATATATATAAAAT 180
consensus_141#1 ------------------------------------------------------------
consensus_141#0 AATATTTCTCATAGAAATACGTTATTTATATTGTAGATAGATTTACTTTTTACTGAACGT 240
consensus_141#1 ------------------------------------------------------------
consensus_141#0 ATTTTTTGTAGTACATAATGAAAGAGAAAGAGGAGGATTAATGTACGCTGTGAGTACGCG 300
consensus_141#1 ------------------------------------------------------------
consensus_141#0 AGCGCGCAGAGTCTCGTTCGAAGCGACAAGCTCTCCGCATTTTAATTGTAATCTAACTAT 360
consensus_141#1 ------------------------------------------------------------
consensus_141#0 TTTCGGGGGTTCTGACAGACGTCGAATCTATCGCTCCCCGCAATCACTGAGCATCCTTGG 420
consensus_141#1 -----------------------------------------------TATTCTTCCGGAC 13
* * ***
consensus_141#0 TCCGGAAGAATAG-AATTACGAATAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCT 479
consensus_141#1 CAAGGATGCTCAGTGATTGCGATTAGCTATTCTTGTTCCACCCTCCCCCGACGTATCGCT 73
*** * ** *** *** *************************************
consensus_141#0 TATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGT 539
consensus_141#1 TATTATCTCTATTATTCTTCCAACTACACGAAGCACGCTATTTTTCCCTTCCTTTCGTGT 133
************************************************************
consensus_141#0 TTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAG 599
consensus_141#1 TTCTCGTAATTCCTGCCCACTTATATTTTGTAAGCGTTAGAATGTCCGGAATCGATCGAG 193
************************************************************
consensus_141#0 AAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGC 659
consensus_141#1 AAACCCAAGAGGAAGCGAGGATTATATTACTTTTTTCTCTCCCTAATCATTGCACTACGC 253
************************************************************
consensus_141#0 TTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCG 719
consensus_141#1 TTGCACTACTCGTTTCTTTTTTTTTCAATTTTTTTTTATATTTTTTTCTCTATCTTCCCG 313
************************************************************
consensus_141#0 ATCCCTTCCCTTCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAG 779
consensus_141#1 ATCCCTTCCCTTCTTGATTCCCCTTTGTTCTTCCCGTTGTTCTTGAAACGAAACGCGAAG 373
************************************************************
consensus_141#0 GGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACA 839
consensus_141#1 GGACGACCAGTGGATGCAACGCAGTGATACTTTCAGACAATACAATTACAATTAATTACA 433
************************************************************
consensus_141#0 TTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGA 899
consensus_141#1 TTACTTATATTATGATAAATTAATCTATTATTGAAACTCCGATCGAAGAAGAATATACGA 493
************************************************************
consensus_141#0 TATGTACTCGATATTCGGTCAATGCTAAATAATTATTATCCNNNTAATTAAGAAATAAAG 959
consensus_141#1 TATGTACTCGATATTCGGTCAATGCTAAATAATTATTATCACT----------------- 536
****************************************
consensus_141#0 TGTGCTCTATGTCATGCTA 978
consensus_141#1 -------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |