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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 667 fasta sequence
[ATAAGAAAAAAAATGCTCGATGTGCAAGAATTGCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTCGTATTTGTTCGTCAGTATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCTGGAGGAGGTTCTGCAGCTGAAGGAGAACTGATCGAAATAGTGGAATTAAGCATTCCAGAAGTAAAAGAATACATCAATTCTGAAGAAGTACAAAGTCCACCATGTTTACTATATGGTATAACTTGGTTTTTAGCTNATAAACCTGAATATTGTTCTTAATATCTTTTAAACTTGTTCAAATTAAATA]
[+] EMBL BI504716 [ATAAGAAAAAAAATGCTCGATGTGCAAGAATTGCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTCGTATTTGTTCGTCAGTATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCTGGAGGAGGTTCTGCAGCTGAAGGAGAACTGATCGAAATAGTGGAATTAAGCATTCCAGAAGTAAAAGAATACATCAATTCTGAAGAAGTACAAAGTCCACCATGTTTACTATATGGTATAACTTGGTTTTTAGCTNATAAACCTGAATATTGTTCTTAATATCTTTTAAACTTGTTCAAATTAAATA]
[+] EMBL BI509527 [ATAAGAAAAAAAATGCTCGATGTGCAAGAATTGCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTCGTATTTGTTCGTCAGTATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAA ]
[+] EMBL BI503131 [ TAAGAAAAAAAATGCTCGATGTGCAAGAATTGCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTCGTATTTGTTCNNNAATATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCTGGAGGAGGTTCTGCAGCTGAAGGAGAACTGATCGAAATAGTGGAATTAAGCATTCCAGAAGTAAAAGAATACATCAATTCTGAAGAAGTACAAAGTCCACCATGTTTACT ]
[+] EMBL BI505153 [ TGTGCAAGAATTGCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTCGTATTTGTTCGTCAGTATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCTGGAGGAGGTTCTGCAGCTGAAGGAGAACTGATCGAAATAGTGGAATTAAGCATTCCAGAAGTAAAAGAATACATCAATTCTGAAGAAGTACAAAGTCCAC ]
[+] EMBL BI507203 [ CCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGTCGAAAAAAACTCGTATTTGTTCGTCAATATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCTGGAGGAGGTTCTGCAGCTGAAGGAGAACTGATCGAAATAGTGGAATTAAGCATTCCAGAAGTAAAAGAATACATCAATTCTGAAGAAGTACAAAGTCCACCATGTTTACTATATGGT ]
consensusID : consensus_142#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 574 fasta sequence
[GCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTCGTATTTGTTCGTCAATATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCTGGTAAGCTAATATAAATATATATATAAATATAATTTTTAAGATTGCTTTACGATTAAAATAATATATTTCATAAAAGATGATATAGCTCTAAATAAATTCATAATATTCAATAAAAAAAAAAAAAA]
[+] EMBL BI503888 [GCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGTCGAAAAAAACTCGTATTTGTTCGTCAATATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACTTTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCTGGTAAGCTAATATAAATATATATATAAATATAATTTTTAAGATTGCTTTACGATTAAAATAATATATTTCATAAAAGATGATATAGCTCTAAATAAATTCATAATATTCAATAAAAAAAAAAAAAA]
[+] EMBL BI512723 [GCGTATTGCAAAATGTCCGTCAAATTCACCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGATGTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTCGTATTTGTTCGTCAATATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGCTCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGTATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGCGGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_142#0 ATAAGAAAAAAAATGCTCGATGTGCAAGAATTGCGTATTGCAAAATGTCCGTCAAATTCA 60
consensus_142#1 --------------------------------GCGTATTGCAAAATGTCCGTCAAATTCA 28
****************************
consensus_142#0 CCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGAT 120
consensus_142#1 CCATGGATCAGACCGGTTAGGATATATTTTAAACAAAATGGCGAACATAAAGATTGGGAT 88
************************************************************
consensus_142#0 GTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTC 180
consensus_142#1 GTGGTAAAAGCACATGATGGTGTCAATATAATTATTTTCAACGTCAGCCGAAAAAAACTC 148
************************************************************
consensus_142#0 GTATTTGTTCGTCAGTATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGC 240
consensus_142#1 GTATTTGTTCGTCAATATCGTCCAGCATATTTTTATACATTTATACCGGAGAAATATGGC 208
************** *********************************************
consensus_142#0 TCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGT 300
consensus_142#1 TCGGTAGATCTTAAACAATATCCACCATCATTGGGTTTAACCTTGGAACTTTGCGCCGGT 268
************************************************************
consensus_142#0 ATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGC 360
consensus_142#1 ATCGTGGATAAGAATAAACCACTTGTCGAGATTGCAAAAGATGAACTACGAGAAGAATGC 328
************************************************************
consensus_142#0 GGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACT 420
consensus_142#1 GGATATGAAGCACCATTGGAAGCCTTTAAATATATCATTACTTGCAGGTATGTTTCCACT 388
************************************************************
consensus_142#0 TTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCT 480
consensus_142#1 TTGGTCTGCAAGCAGACACTTTTCTATGTAGAAGTTACAGATGAAATGCATACTCATCCT 448
************************************************************
consensus_142#0 GGAGGAGGTTCTGCAGCTGAAGGAGAACTGATCGAAATAGTGGAATTAAGCATTCCAGAA 540
consensus_142#1 GGTA-AGCTAATATAAAT--ATATATATAAATATAATTTTTAAGATTG----CTTTACGA 501
** ** * * * * * * ** ** * * *** * * *
consensus_142#0 GTAAAAGAATACATCAATTCTGAAGAAGTACAAAGTCCACCATGTTTACTATATGGTATA 600
consensus_142#1 TTAAAATAATATATTTCATAAAAGATGATATAGCTCTAAATAAATTCATAATATTCAATA 561
***** **** ** * * ** * * * ** * **** ***
consensus_142#0 ACTTGGTTTTTAGCTNATAAACCTGAATATTGTTCTTAATATCTTTTAAACTTGTTCAAA 660
consensus_142#1 AAAAAAAAAAAAA----------------------------------------------- 574
* *
consensus_142#0 TTAAATA 667
consensus_142#1 -------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |