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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1491#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence
[CGTGCGAAATTTGCTTAACAATTATGGGAGTATCGATCCAGCTATCAAAGTATCCGCAAGCGATCCAAATTTATCGACTTACTACAATTAAGAGATTCTGACTATCAAACGCACGATATTGACACGAAATTTGGAACGCTTGACGCGAGATATATATATATATATATATATTTATATATATATATATATATTTTTTTTTTAATAGATTATTGTATCTGCAGAGAATATATATATATATGTATAATGTAACAATCATGAGACACTTTGTTTGGTAACTTAAGTTAGGACTTTTTTTTTTTTTTTAACTTTATTTACAGCTTACAACGAGCAACATCAATCACCCTTCAACTACCTAATGTTTTCGCGATTCGGGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTAT]
[+] EMBL BI516292 [CGTGCGAAATTTGCTTAACAATTATGGGAGTATCGATCCAGCTATCAAAGTATCCGCAAGCGATCCAAATTTATCGACTTACTACAATTAAGAGATTCTGACTATCAAACGCACGATATTGACACGAAATTTGGAACGCTTGACGCGAGATATATATATATATATATATATTTATATATATATATATATATTTTTTTTTTAATAGATTATTGTATCTGCAGAGAATATATATATATATGTATAATGTAACAATCATGAGACACTTTGTTTGGTAACTTAAGTTAGGACTTTTTTTTTTTTTTTAACTTTATTTACAGCTTACAACGAGCAACATCAATCACCCTTCAACTACCTAATGTTTTCGCGATTCGGGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTAT]
consensusID : consensus_1491#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence
[GGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTATTAAAGAGACGAAGATACACTCTACAACTTTTATATTACGTTAGGCACTAGAAGAATCACAGTCATGAAACTATGACGATACCGCGCGAGCGGTAAGGTCATTAGGTGTATAAAAAAAAAAAAAAAAAGAAGAAGAAATGCTTCAACACACTTCGAGAAATGAGAAGGAATCGAATCAAGATTATCACTGATCGCGGTAATCATTTTATATCGGGGATATCCTCGTCATTCCTNNCTCGAGATCTCTTGACTACTCGATCGCTAAAAAATTACGTAAAGAAAAATTGCG]
[+] EMBL BI515179 [GGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTATTAAAGAGACGAAGATACACTCTACAACTTTTATATTACGTTAGGCACTAGAAGAATCACAGTCATGAAACTATGACGATACCGCGCGAGCGGTAAGGTCATTAGGTGTATAAAAAAAAAAAAAAAAAGAAGAAGAAATGCTTCAACACACTTCGAGAAATGAGAAGGAATCGAATCAAGATTATCACTGATCGCGGTAATCATTTTATATCGGGGATATCCTCGTCATTCCTNNCTCGAGATCTCTTGACTACTCGATCGCTAAAAAATTACGTAAAGAAAAATTGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1491#0 CGTGCGAAATTTGCTTAACAATTATGGGAGTATCGATCCAGCTATCAAAGTATCCGCAAG 60
consensus_1491#1 -------------------------GGCAAT-TCAATGCGCCTTTGTACACGTTC-CACG 33
** * * ** ** * ** * * * * ** *
consensus_1491#0 CGATCCAAATTTATCGACTTACTACAATTAAGAGATTCTGACTATCAAACGCACGATATT 120
consensus_1491#1 TACTCCCCTTTTCTTTGGCAATATTATTAAAGAGAC---GAAGATACACTCTACAACTTT 90
*** *** * * * * ****** ** ** * ** * **
consensus_1491#0 GACACGAAATTTGGAACGCTTGACGCGAGATATATATATATATATATATATTTATATATA 180
consensus_1491#1 TATATTACGTTAGGCACTAGAAGAATCACAGTCATGAAACTATGACGATACCGCGCGAGC 150
* * * ** ** ** * * ** * *** *** *
consensus_1491#0 TATATATATATTTTTTTTTTAATAGATTATTGTATCTGCAGAGAATATATATATATATGT 240
consensus_1491#1 GGTAAGGTCATTAGGTGTATAAAAAAAAAAAAAAAAAGAAGAAGAAATGCTTCAACACAC 210
** *** * * *** * * * * * *** * ** * * *
consensus_1491#0 ATAATGTAACAATCATGAGACACTTTGTTTGGTAACTTAAGTTAGGACTTTTTTTTTTTT 300
consensus_1491#1 TTCGAGAAATGAGAAGGAATCGAATCA--AGATTATCACTGATCGCGGTAATCATTTTAT 268
* * ** * * ** * * * * * * * * * * **** *
consensus_1491#0 TTTAACTTTATTTACAGCTTACAACGAGCAACATCAATC-ACCCTTCAACTACCTAATGT 359
consensus_1491#1 ATCGGGGATATCCTCGTCATTCCTNNCTCGAGATCTCTTGACTACTCGATCGCTAAAAAA 328
* *** * * * * * * *** * ** ** * * **
consensus_1491#0 TTTCGCGATTCGGGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTT 419
consensus_1491#1 TTACGTAAA--GAAAAATTGCG-------------------------------------- 348
** ** * * ****
consensus_1491#0 TGGCAATATTAT 431
consensus_1491#1 ------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |