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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1506#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1530 fasta sequence
[ATTCATGTCTCGGCCTCTCGTGATCACGGAAGGGATGATGATTGGAGTGTTGCTAATGCTAGCCCCGATAAACGCGTTATTACTCGGCTTCGTACAGAGCACCCCCGACAACAACAAAACCGTACGGGAGTTCAACGTTTACTGGAACGTGCCCACCTTTATGTGCCATAAATACGGGCTACGGTTCGAAGAAGTATCGGAGAAATATGGTATTCTACAGAACTGGATGGATAAGTTTCGGGGCGAGGAGATCGCGATCCTTTACGACCCTGGAATGTTCCCGGCGTTGCTGAAAGACCCGAATGGGAACGTGGTGGCGAGGAACGGCGGTGTCCCGCAACTGGGCAATCTCACCAAGCATCTGCAAGTATTTCGGGACCACTTGATCAATCAGATCCCGGACAAGTCGTTTCCCGGCGTGGGGGTGATCGATTTCGAAAGTTGGAGGCCGATATTCAGACAGAACTGGGCCTCCCTCCAGCCTTACAAGAAACTGTCCGTAGAGGTGGTTCGCCGTGAGCATCCGTTCTGGGACGATCAGAGGGTGGAGCAGGAGGCGAAACGAAGGTTCGAGAAATACGGGCAGCTTTTCATGGAGGAGACGTTGAAAGCGGCGAAACGGATGAGGCCGGCCGCCAATTGGGGATACTACGCCTACCCTTATTGCTACAATCTGACGCCGAATCAGCCGAGCGCCCAATGCGAAGCGACCACCATGCAGGAGAACGATAAAATGTCGTGGCTGTTCGAGTCGGAAGACGTCCTCCTTCCGTCCGTTTACTTGAGATGGAATCTGACGAGCGGCGAAAGAGTGGGCCTGGTCGGTGGCCGCGTGAAGGAGGCGTTGAGAATAGCGAGGCAAATGACGACCAGCAGGAAGAAGGTTCTACCATATTACTGGTACAAATATCAGGATCGAAGGGACACGGATTTGAGCAGGGCTGACCTCGAGGCAACTTTACGAAAAATCACGGACCTCGGCGCCGACGGGTTCATCATTTGGGGAAGTTCCGACGATATAAACACGAAGGCGAAGTGCCTACAATTCAGGGAATACCTGAACAACGAGTTGGGCCCTGCCGTTAAACGAATCGCGTTGAACAACAACGCGAACGATCGACTGACGGTGGACGTGAGCGTGGACCAAGTGTGACCGTAGCCACCGAGCTCGGGGAAGCTGGAGCCGGAGCTGGTTCTCTTAATCGCCAGAGCGGATCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATTGTGCGAACGTTCTTCGGTTTCTGAACGCTTATTACGCGACGTAGCATACGCGTGATTACCATACTCGCGATACGTGCGAGGAGGAACGGCGCCCGACCTTCGAAATGGAAAGATGTCGAACACGGGAAACGACGACGCGTGTCGTTTGAAAGCAAAGCCGATTGGTCTAGTCGATACAGTTGGGAGGCGATAGTTGCGCGATTCCAACGTAGCAGTTGGACGTGTCGTGCAACGATCGTGAGGGAGGGGAAAGAGAAATATTTATATCGTAAATAAA]
[+] EMBL AMHYALURA [ATTCATGTCTCGGCCTCTCGTGATCACGGAAGGGATGATGATTGGAGTGTTGCTAATGCTAGCCCCGATAAACGCGTTATTACTCGGCTTCGTACAGAGCACCCCCGACAACAACAAAACCGTACGGGAGTTCAACGTTTACTGGAACGTGCCCACCTTTATGTGCCATAAATACGGGCTACGGTTCGAAGAAGTATCGGAGAAATATGGTATTCTACAGAACTGGATGGATAAGTTTCGGGGCGAGGAGATCGCGATCCTTTACGACCCTGGAATGTTCCCGGCGTTGCTGAAAGACCCGAATGGGAACGTGGTGGCGAGGAACGGCGGTGTCCCGCAACTGGGCAATCTCACCAAGCATCTGCAAGTATTTCGGGACCACTTGATCAATCAGATCCCGGACAAGTCGTTTCCCGGCGTGGGGGTGATCGATTTCGAAAGTTGGAGGCCGATATTCAGACAGAACTGGGCCTCCCTCCAGCCTTACAAGAAACTGTCCGTAGAGGTGGTTCGCCGTGAGCATCCGTTCTGGGACGATCAGAGGGTGGAGCAGGAGGCGAAACGAAGGTTCGAGAAATACGGGCAGCTTTTCATGGAGGAGACGTTGAAAGCGGCGAAACGGATGAGGCCGGCCGCCAATTGGGGATACTACGCCTACCCTTATTGCTACAATCTGACGCCGAATCAGCCGAGCGCCCAATGCGAAGCGACCACCATGCAGGAGAACGATAAAATGTCGTGGCTGTTCGAGTCGGAAGACGTCCTCCTTCCGTCCGTTTACTTGAGATGGAATCTGACGAGCGGCGAAAGAGTGGGCCTGGTCGGTGGCCGCGTGAAGGAGGCGTTGAGAATAGCGAGGCAAATGACGACCAGCAGGAAGAAGGTTCTACCATATTACTGGTACAAATATCAGGATCGAAGGGACACGGATTTGAGCAGGGCTGACCTCGAGGCAACTTTACGAAAAATCACGGACCTCGGCGCCGACGGGTTCATCATTTGGGGAAGTTCCGACGATATAAACACGAAGGCGAAGTGCCTACAATTCAGGGAATACCTGAACAACGAGTTGGGCCCTGCCGTTAAACGAATCGCGTTGAACAACAACGCGAACGATCGACTGACGGTGGACGTGAGCGTGGACCAAGTGTGACCGTAGCCACCGAGCTCGGGGAAGCTGGAGCCGGAGCTGGTTCTCTTAATCGCCAGAGCGGATCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATTGTGCGAACGTTCTTCGGTTTCTGAACGCTTATTACGCGACGTAGCATACGCGTGATTACCATACTCGCGATACGTGCGAGGAGGAACGGCGCCCGACCTTCGAAATGGAAAGATGTCGAACACGGGAAACGACGACGCGTGTCGTTTGAAAGCAAAGCCGATTGGTCTAGTCGATACAGTTGGGAGGCGATAGTTGCGCGATTCCAACGTAGCAGTTGGACGTGTCGTGCAACGATCGTGAGGGAGGGGAAAGAGAAATATTTATATCGTAAATAAA]
consensusID : consensus_1506#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1427 fasta sequence
[AAGAAAAAAAGAGTAGAAAATAAAAAGAAAAAAAAAGAGAATGTTGGCAAGCGCATCCCTGCAACTCCTGAAATACCCATAAAGCGTTCAAGTTCAGGTCTGAAAATATCTTATCTAATTCGTGTCATTGGCCTCGAGTCTCTCGAGCCACGACTTCGCTAACACCTCGTTTCTCTTCTATCAGCTTCGTACAGAGCACCCCCGACAACAACAAAACCGTACGGGAGTTCAACGTTTACTGGAACGTGCCCACCTTTATGTGCCATAAATACGGGCTACGGTTCGAAGAAGTATCGGAGAAATATGGTATTCTACAGAACTGGATGGATAAGTTTCGGGGCGAGGAGATCGCGATCCTTTACGACCCTGGAATGTTCCCGGCGTTGCTGAAAGACCCGAATGGTAAACAATACACGCACATTTCACGCATACACACGCACACTTTCCACGATCGTATCACGGAAAAATCACGAGGGGGGCGAAAGGGGGAGGAAAGAGGAAAGAAACGAAAGTTTGAAACGTTGTCCAGGGAACGTGGTGGCGAGGAACGGCGGTGTCCCGCAACTGGGCAATCTCACCAAGCATCTGCAAGTATTTCGGGACCACTTGATCAATCAGATCCCGGACAAGTCGTTTCCCGGCGTGGGGGTGATCGATTTCGAAAGTTGGAGGCCGATATTCAGACAGAACTGGGCCTCCCTCCAGCCTTACAAGAAACTGTCCGTAGAGGTGGTTCGCCGTGAGCATCCGTTCTGGGACGATCAGAGAGTGGAGCAGGAGGCGAAACGAAGGTTCGAGAAATACGGGCAGCTTTTCATGGAGGAGACGTTGAAAGCGGCGAAACGGATGAGGCCGGCCGCCAATTGGGGATACTACGCCTACCCTTATTGCTACAATCTGACGCCGAATCAGCCGAGCGCCCAATGCGAAGCGACCACCATGCAGGAGAACGATAAAATGTCGTGGCTGTTCGAGTCGGAAGACGTCCTCCTTCCGTCCGTTTACTTGAGATGGAATCTGACGAGCGGCGAAAGAGTGGGCCTGGTCGGTGGCCGCGTGAAGGAGGCGTTGAGAATAGCGAGGCAAATGACGACCAGCAGGAAGAAGGTTCTACCCTATTACTGGTACAAATATCAGGATCGAAGGGACACGGATTTGAGCAGGGCTGACCTCGAGGCAACTTTACGAAAAATCACGGACCTCGGCGCCGACGGGTTCATCATTTGGGGAAGTTCCGACGATATAAACACGAAGGCGAAGTGTCTACAATTCAGGGAATACCTGAACAACGAGTTGGGCCCTGCCGTTAAACGAATCGCGTTGAACAACAACGCGAACAGTCGACTGACGGTGGACGTGAGCGTGGACCAAGTGTGACCGTAGCCACCGAGCTCGGGGAAGCTGGAGCCGGAGCTGGTTCTCTTAAT]
[+] EMBL AMHYALURB [AAGAAAAAAAGAGTAGAAAATAAAAAGAAAAAAAAAGAGAATGTTGGCAAGCGCATCCCTGCAACTCCTGAAATACCCATAAAGCGTTCAAGTTCAGGTCTGAAAATATCTTATCTAATTCGTGTCATTGGCCTCGAGTCTCTCGAGCCACGACTTCGCTAACACCTCGTTTCTCTTCTATCAGCTTCGTACAGAGCACCCCCGACAACAACAAAACCGTACGGGAGTTCAACGTTTACTGGAACGTGCCCACCTTTATGTGCCATAAATACGGGCTACGGTTCGAAGAAGTATCGGAGAAATATGGTATTCTACAGAACTGGATGGATAAGTTTCGGGGCGAGGAGATCGCGATCCTTTACGACCCTGGAATGTTCCCGGCGTTGCTGAAAGACCCGAATGGTAAACAATACACGCACATTTCACGCATACACACGCACACTTTCCACGATCGTATCACGGAAAAATCACGAGGGGGGCGAAAGGGGGAGGAAAGAGGAAAGAAACGAAAGTTTGAAACGTTGTCCAGGGAACGTGGTGGCGAGGAACGGCGGTGTCCCGCAACTGGGCAATCTCACCAAGCATCTGCAAGTATTTCGGGACCACTTGATCAATCAGATCCCGGACAAGTCGTTTCCCGGCGTGGGGGTGATCGATTTCGAAAGTTGGAGGCCGATATTCAGACAGAACTGGGCCTCCCTCCAGCCTTACAAGAAACTGTCCGTAGAGGTGGTTCGCCGTGAGCATCCGTTCTGGGACGATCAGAGAGTGGAGCAGGAGGCGAAACGAAGGTTCGAGAAATACGGGCAGCTTTTCATGGAGGAGACGTTGAAAGCGGCGAAACGGATGAGGCCGGCCGCCAATTGGGGATACTACGCCTACCCTTATTGCTACAATCTGACGCCGAATCAGCCGAGCGCCCAATGCGAAGCGACCACCATGCAGGAGAACGATAAAATGTCGTGGCTGTTCGAGTCGGAAGACGTCCTCCTTCCGTCCGTTTACTTGAGATGGAATCTGACGAGCGGCGAAAGAGTGGGCCTGGTCGGTGGCCGCGTGAAGGAGGCGTTGAGAATAGCGAGGCAAATGACGACCAGCAGGAAGAAGGTTCTACCCTATTACTGGTACAAATATCAGGATCGAAGGGACACGGATTTGAGCAGGGCTGACCTCGAGGCAACTTTACGAAAAATCACGGACCTCGGCGCCGACGGGTTCATCATTTGGGGAAGTTCCGACGATATAAACACGAAGGCGAAGTGTCTACAATTCAGGGAATACCTGAACAACGAGTTGGGCCCTGCCGTTAAACGAATCGCGTTGAACAACAACGCGAACAGTCGACTGACGGTGGACGTGAGCGTGGACCAAGTGTGACCGTAGCCACCGAGCTCGGGGAAGCTGGAGCCGGAGCTGGTTCTCTTAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1506#0 ------------------------------------------------------------
consensus_1506#1 AAGAAAAAAAGAGTAGAAAATAAAAAGAAAAAAAAAGAGAATGTTGGCAAGCGCATCCCT 60
consensus_1506#0 -------------------------------ATTCATGTCTCGGCCTCTCGTGATCACGG 29
consensus_1506#1 GCAACTCCTGAAATACCCATAAAGCGTTCAAGTTCAGGTCTGAAAATATC-TTATCTAAT 119
**** **** * ** * ***
consensus_1506#0 AAGGGATGATGAT-TGGAGTGTTGCTAATGCTAGCCCCGATAAA--CGCGTTATTACTC- 85
consensus_1506#1 TCGTGTCATTGGCCTCGAGTCTCTCGAGCCACGACTTCGCTAACACCTCGTTTCTCTTCT 179
* * ** * **** * * * * ** *** * **** * **
consensus_1506#0 ---GGCTTCGTACAGAGCACCCCCGACAACAACAAAACCGTACGGGAGTTCAACGTTTAC 142
consensus_1506#1 ATCAGCTTCGTACAGAGCACCCCCGACAACAACAAAACCGTACGGGAGTTCAACGTTTAC 239
********************************************************
consensus_1506#0 TGGAACGTGCCCACCTTTATGTGCCATAAATACGGGCTACGGTTCGAAGAAGTATCGGAG 202
consensus_1506#1 TGGAACGTGCCCACCTTTATGTGCCATAAATACGGGCTACGGTTCGAAGAAGTATCGGAG 299
************************************************************
consensus_1506#0 AAATATGGTATTCTACAGAACTGGATGGATAAGTTTCGGGGCGAGGAGATCGCGATCCTT 262
consensus_1506#1 AAATATGGTATTCTACAGAACTGGATGGATAAGTTTCGGGGCGAGGAGATCGCGATCCTT 359
************************************************************
consensus_1506#0 TACGACCCTGGAATGTTCCCGGCGTTGCTGAAAGACCCGAATGG---------------- 306
consensus_1506#1 TACGACCCTGGAATGTTCCCGGCGTTGCTGAAAGACCCGAATGGTAAACAATACACGCAC 419
********************************************
consensus_1506#0 ------------------------------------------------------------
consensus_1506#1 ATTTCACGCATACACACGCACACTTTCCACGATCGTATCACGGAAAAATCACGAGGGGGG 479
consensus_1506#0 ---------------------------------------------------GAACGTGGT 315
consensus_1506#1 CGAAAGGGGGAGGAAAGAGGAAAGAAACGAAAGTTTGAAACGTTGTCCAGGGAACGTGGT 539
*********
consensus_1506#0 GGCGAGGAACGGCGGTGTCCCGCAACTGGGCAATCTCACCAAGCATCTGCAAGTATTTCG 375
consensus_1506#1 GGCGAGGAACGGCGGTGTCCCGCAACTGGGCAATCTCACCAAGCATCTGCAAGTATTTCG 599
************************************************************
consensus_1506#0 GGACCACTTGATCAATCAGATCCCGGACAAGTCGTTTCCCGGCGTGGGGGTGATCGATTT 435
consensus_1506#1 GGACCACTTGATCAATCAGATCCCGGACAAGTCGTTTCCCGGCGTGGGGGTGATCGATTT 659
************************************************************
consensus_1506#0 CGAAAGTTGGAGGCCGATATTCAGACAGAACTGGGCCTCCCTCCAGCCTTACAAGAAACT 495
consensus_1506#1 CGAAAGTTGGAGGCCGATATTCAGACAGAACTGGGCCTCCCTCCAGCCTTACAAGAAACT 719
************************************************************
consensus_1506#0 GTCCGTAGAGGTGGTTCGCCGTGAGCATCCGTTCTGGGACGATCAGAGGGTGGAGCAGGA 555
consensus_1506#1 GTCCGTAGAGGTGGTTCGCCGTGAGCATCCGTTCTGGGACGATCAGAGAGTGGAGCAGGA 779
************************************************ ***********
consensus_1506#0 GGCGAAACGAAGGTTCGAGAAATACGGGCAGCTTTTCATGGAGGAGACGTTGAAAGCGGC 615
consensus_1506#1 GGCGAAACGAAGGTTCGAGAAATACGGGCAGCTTTTCATGGAGGAGACGTTGAAAGCGGC 839
************************************************************
consensus_1506#0 GAAACGGATGAGGCCGGCCGCCAATTGGGGATACTACGCCTACCCTTATTGCTACAATCT 675
consensus_1506#1 GAAACGGATGAGGCCGGCCGCCAATTGGGGATACTACGCCTACCCTTATTGCTACAATCT 899
************************************************************
consensus_1506#0 GACGCCGAATCAGCCGAGCGCCCAATGCGAAGCGACCACCATGCAGGAGAACGATAAAAT 735
consensus_1506#1 GACGCCGAATCAGCCGAGCGCCCAATGCGAAGCGACCACCATGCAGGAGAACGATAAAAT 959
************************************************************
consensus_1506#0 GTCGTGGCTGTTCGAGTCGGAAGACGTCCTCCTTCCGTCCGTTTACTTGAGATGGAATCT 795
consensus_1506#1 GTCGTGGCTGTTCGAGTCGGAAGACGTCCTCCTTCCGTCCGTTTACTTGAGATGGAATCT 1019
************************************************************
consensus_1506#0 GACGAGCGGCGAAAGAGTGGGCCTGGTCGGTGGCCGCGTGAAGGAGGCGTTGAGAATAGC 855
consensus_1506#1 GACGAGCGGCGAAAGAGTGGGCCTGGTCGGTGGCCGCGTGAAGGAGGCGTTGAGAATAGC 1079
************************************************************
consensus_1506#0 GAGGCAAATGACGACCAGCAGGAAGAAGGTTCTACCATATTACTGGTACAAATATCAGGA 915
consensus_1506#1 GAGGCAAATGACGACCAGCAGGAAGAAGGTTCTACCCTATTACTGGTACAAATATCAGGA 1139
************************************ ***********************
consensus_1506#0 TCGAAGGGACACGGATTTGAGCAGGGCTGACCTCGAGGCAACTTTACGAAAAATCACGGA 975
consensus_1506#1 TCGAAGGGACACGGATTTGAGCAGGGCTGACCTCGAGGCAACTTTACGAAAAATCACGGA 1199
************************************************************
consensus_1506#0 CCTCGGCGCCGACGGGTTCATCATTTGGGGAAGTTCCGACGATATAAACACGAAGGCGAA 1035
consensus_1506#1 CCTCGGCGCCGACGGGTTCATCATTTGGGGAAGTTCCGACGATATAAACACGAAGGCGAA 1259
************************************************************
consensus_1506#0 GTGCCTACAATTCAGGGAATACCTGAACAACGAGTTGGGCCCTGCCGTTAAACGAATCGC 1095
consensus_1506#1 GTGTCTACAATTCAGGGAATACCTGAACAACGAGTTGGGCCCTGCCGTTAAACGAATCGC 1319
*** ********************************************************
consensus_1506#0 GTTGAACAACAACGCGAACGATCGACTGACGGTGGACGTGAGCGTGGACCAAGTGTGACC 1155
consensus_1506#1 GTTGAACAACAACGCGAACAGTCGACTGACGGTGGACGTGAGCGTGGACCAAGTGTGACC 1379
******************* ***************************************
consensus_1506#0 GTAGCCACCGAGCTCGGGGAAGCTGGAGCCGGAGCTGGTTCTCTTAATCGCCAGAGCGGA 1215
consensus_1506#1 GTAGCCACCGAGCTCGGGGAAGCTGGAGCCGGAGCTGGTTCTCTTAAT------------ 1427
************************************************
consensus_1506#0 TCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATTGTGCGAACGTTCTTCGGTTTCT 1275
consensus_1506#1 ------------------------------------------------------------
consensus_1506#0 GAACGCTTATTACGCGACGTAGCATACGCGTGATTACCATACTCGCGATACGTGCGAGGA 1335
consensus_1506#1 ------------------------------------------------------------
consensus_1506#0 GGAACGGCGCCCGACCTTCGAAATGGAAAGATGTCGAACACGGGAAACGACGACGCGTGT 1395
consensus_1506#1 ------------------------------------------------------------
consensus_1506#0 CGTTTGAAAGCAAAGCCGATTGGTCTAGTCGATACAGTTGGGAGGCGATAGTTGCGCGAT 1455
consensus_1506#1 ------------------------------------------------------------
consensus_1506#0 TCCAACGTAGCAGTTGGACGTGTCGTGCAACGATCGTGAGGGAGGGGAAAGAGAAATATT 1515
consensus_1506#1 ------------------------------------------------------------
consensus_1506#0 TATATCGTAAATAAA 1530
consensus_1506#1 ---------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |