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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1714#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[ATTTGTGTTGCTACTTGTGCCCTTGATTTTCCTACACTGTCTGCTTCTAGAAAAAAAATATATATATATACTTTGCACCGATATCTTCATTAGTAATTTTCTTGCCATCTACAATTGTAAACGCTCCAATACCTGGTAAAACTAGAGATTTTAAAATTTCTGTACCAAGGCCTGTAGCATTTATTACACAAATGTGTGCTCCTTCTAATGCAGCTTGACCATGATCACCCCATAACCTCAATTGTCTATCATATTTTCTATTTCTTTCAGATTGCTCTGGCGATTTTGGTGCTGGTGATGCCATAAGGATAGACTAATAAGAATAAAATAATGATATATATATATAATATTTTACTTTGGACAATGTAAAATATTACTTTCAATCAAAATTTTATTCACAACAACGCTTACTCTTATACTTATAAACTTGCACGAATCAACACAAATGAATCATTTTTGTAATATAAAATAAATTAAAATATTTTTATCGATCAAAACTAAATAGTATCTAAAATTATATAATAAAATTAAAAATTAATAAAAATAAAA]
[+] EMBL BI505296 [ATTTGTGTTGCTACTTGTGCCCTTGATTTTCCTACACTGTCTGCTTCTAGAAAAAAAATATATATATATACTTTGCACCGATATCTTCATTAGTAATTTTCTTGCCATCTACAATTGTAAACGCTCCAATACCTGGTAAAACTAGAGATTTTAAAATTTCTGTACCAAGGCCTGTAGCATTTATTACACAAATGTGTGCTCCTTCTAATGCAGCTTGACCATGATCACCCCATAACCTCAATTGTCTATCATATTTTCTATTTCTTTCAGATTGCTCTGGCGATTTTGGTGCTGGTGATGCCATAAGGATAGACTAATAAGAATAAAATAATGATATATATATATAATATTTTACTTTGGACAATGTAAAATATTACTTTCAATCAAAATTTTATTCACAACAACGCTTACTCTTATACTTATAAACTTGCACGAATCAACACAAATGAATCATTTTTGTAATATAAAATAAATTAAAATATTTTTATCGATCAAAACTAAATAGTATCTAAAATTATATAATAAAATTAAAAATTAATAAAAATAAAA]
consensusID : consensus_1714#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 494 fasta sequence
[AGACAGTGTAGGAAAATCAAGGGCACAAGTAGCAACACAAATGCTTTTAGAGTTAAATTCAGATGTTAGAGGTGATTATATAGACGAGGAACCTGAACAAATTTTATGTAATAGTCCAGATTTTTTTAACAATTTTACCGTTGTCGTAGCCACTTCTTTATCAGAGAAATCTTTAATTCTTCTATCACAAAGACTTTGGGAATTAAATATACCTTTAATAGTATGTAGAAGTATAGGATTTATCGCATATATGAGAATTCAAGTGAAAGAACATACGGTTATAGAAACACATCCAGATAATGAAATTCCAGATTTACGTTTGGACAAGCCATTTGAGATATTAAAAAAAACATTTTGATTCCATAAATTTAGATGAACTTAGTTTTAAAGATCATTCTCATATACCGTACTTAGTTATACTATATAAATTTCTAGAAAAATGGACTTTACATAAAAAGGATTTACCTAAAACTTATAAAGAAAAACATCAATTA]
[+] EMBL BI513433 [AGACAGTGTAGGAAAATCAAGGGCACAAGTAGCAACACAAATGCTTTTAGAGTTAAATTCAGATGTTAGAGGTGATTATATAGACGAGGAACCTGAACAAATTTTATGTAATAGTCCAGATTTTTTTAACAATTTTACCGTTGTCGTAGCCACTTCTTTATCAGAGAAATCTTTAATTCTTCTATCACAAAGACTTTGGGAATTAAATATACCTTTAATAGTATGTAGAAGTATAGGATTTATCGCATATATGAGAATTCAAGTGAAAGAACATACGGTTATAGAAACACATCCAGATAATGAAATTCCAGATTTACGTTTGGACAAGCCATTTGAGATATTAAAAAAAACATTTTGATTCCATAAATTTAGATGAACTTAGTTTTAAAGATCATTCTCATATACCGTACTTAGTTATACTATATAAATTTCTAGAAAAATGGACTTTACATAAAAAGGATTTACCTAAAACTTATAAAGAAAAACATCAATTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1714#0 ATTTGTGTTGCTACTTGTGCCCTTGATTTTCCTACACTGTCTGCTTCTAGAAAAAAAATA 60
consensus_1714#1 ----------------------------------------------------AGACAGTG 8
* * * *
consensus_1714#0 TATATATATACTTTGCACCGATATCTTCATTAGTAATTTTCTTGCCATCTACAATTGT-- 118
consensus_1714#1 TAGGAAAATCAAGGGCACAAGTAGCAACACAAATGCTTTTAGAGTTAAATTCAGATGTTA 68
** * ** **** ** * ** * * **** * * * ** ***
consensus_1714#0 -AAACGCTCCAATACCTGGTAAAACTAGA-GATTTTAAAATTTCTGTACCAAGGCCTGTA 176
consensus_1714#1 GAGGTGATTATATAGACGAGGAACCTGAACAAATTTTATGTAATAGTCCAGATTTTTTTA 128
* * * *** * ** ** * * *** * * ** * * * **
consensus_1714#0 GCATTTATTACACAAATGTGTGCTCCTTCTAATGCAGCTTGACCATGATCACCCCATAAC 236
consensus_1714#1 ACAATTTTACCGTTGTCGTA-GCCACTTCTTTATCAGAGAAATCTTTA--ATTCTTCTAT 185
** ** * * ** ** ***** *** * * * * * * *
consensus_1714#0 CTCAATTGTCTATCATATTTTCTATTTCTTTCAGATTGCTCTGGCGATTTTGGTGCTGGT 296
consensus_1714#1 CACAAAGACTTTGGGAATTAAATATACCTTTAATAGTA-TGTAGAAGTATAGGATTTATC 244
* *** * *** *** **** * * * * * * * * ** *
consensus_1714#0 GATGCCATAAGGATAGACTAATAAGAATAAAATAATGATATATATATATAATATTTTACT 356
consensus_1714#1 GCATATATGAGAAT---TCAAGTGAAAGAACATACGGTTATAGAAACACA----TCCAGA 297
* ** ** ** ** ** ** *** * **** * * * * * *
consensus_1714#0 TTGGACAATGTAAAATATTACTTTCAATCAAA--ATTTTATTCACAACAACGCTTACTCT 414
consensus_1714#1 TAATGAAATTCCAGAT-TTACGTTTGGACAAGCCATTTGAGATATTAAAAAAAACATTTT 356
* *** * ** **** ** *** **** * * * ** * * *
consensus_1714#0 TATACTTATAAACTTGCACGAATCAACACAAATGAATCATTTTTGTAATATAAAATAAAT 474
consensus_1714#1 GATTCC-ATAAATTTAGATGAACTTAGTTTTAAAGATCATTCTCATATACCGTACTTAGT 415
** * ***** ** * *** * * ****** * ** * * * *
consensus_1714#0 TAAAATATTTTTATCGATCAAAACTAAATAGTATCTAAAATTATATAATAAAATTAAAAA 534
consensus_1714#1 TATACTATATAAATTTCTAGAAA---AATGGACTTTACATAAAAAGGATTTACCTAAAAC 472
** * *** * ** * *** *** * * ** * * * ** * *****
consensus_1714#0 TTAATAAAAATAAAA------- 549
consensus_1714#1 TTATAAAGAAAAACATCAATTA 494
*** ** ** ** *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |