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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_175#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 751 fasta sequence
[CCAATATCAATTCTCCACCATATTTATCATCAGGATTTCTGTTTAAATAAAAACTAAAAACAGGTTGAGGTACTAATCCTTGTTTAACCATATTGTAAAATACAGGTGTTACACCATCAACAGAAATTTTAGAATAAGCCATTCCTAAGATACCATCAAATTTAGCAGCAACAAAAGCTAATCCAGGTTCACTCAAAGCTTCAGCAAAAGTCTGATCAGAAATTTTCATTCCTGCAATATCTACAGTATCAGTGGAAAGATAGCCAGAGAGACTTCCAGAGCCATAACGGATTGCAAAGTCAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGCAAGC-AATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACACCATAATATTGAGCATCTAAGTAGTTAGAAAGAGGTTCTGGCTGAGGCAAATCTCCTTGAAATATATGTGTTTGATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATGGAATCCTCGTAACATCAGCATTGGCTATCGCTATAAAAGCGCAAAAGCACAGAATGGCATGAAACATTTTTAAATAAGTTTCCAGTGCCTTTAAAATTAAAAGATTAAGTTATGTATTAAAAAAAAAAAAAAATAGCACTATAGAAAAAAA]
[+] EMBL BI510332 [CCAATATCAATTCTCCACCATATTTATCATCAGGATTTCTGTTTAAATAAAAACTAAAAACAGGTTGAGGTACTAATCCTTGTTTAACCATATTGTAAAATACAGGTGTTACACCATCAACAGAAATTTTAGAATAAGCCATTCCTAAGATACCATCAAATTTAGCAGCAACAAAAGCTAATCCAGGTTCACTCAAAGCTTCAGCAAAAGTCTGATCAGAAATTTTCATTCCTGCAATATCTACAGTATCAGTGGAAAGATAGCCAGAGAGACTTCCAGAGCCATAACGGATTGCAAAGTCAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGCAAGC AATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACACCATAATATTGAGCATCTAAGTAGTTAGNAAGAGGTTCTGGCTGNNNCAAATCTCCTTGAAATATATGTGTTTGATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTAT ]
[-] EMBL BI507683 [ TCAGGATTTCTGTTTAAATAAAAACTAAAAACAGGTTGAGGTACTAATCCTTGTTTAACCATATTGTAAAATACAGGTGTTACACCATCAACAGAAATTTTAGAATAAGCCATTNNNAAGATACCATCAAATTTAGCAGCAACAAAAGCTAATCCAGGTTCACTCAAAGCTTCAGCAAAAGTCTGATCAGAAATTTTCATTCCTGCAATATCTACAGTATCAGTGGAAAGATAGCCAGAGAGACTTCCAGAGCCATAACGGATTGCAAAGTCAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGCAAGCNNNTATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCT ]
[-] EMBL BI506155 [ AAAAACAGGTTGAGGTACTAATCCTTGTTTAACCATATTGTAAAATACAGGTGTTACACCATCAACAGAAATTTTAGAATAAGCCATTCCTAAGATACCATCAAATTTAGCAGCAACAAAAGCTAATCCAGGTTCACTCAAAGCTTCAGCAAAAGTCTGATCAGAAATTTTCATTCCTGCAATATCTACAGTATCAGTGGAAAGATAGCCAGAGAGACTTCCAGAGCCATAACGGATTGCAAAGTCAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGCAAGC AATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACACCATAATATTGAGCATCTAAGTAGTTAGAAAGAGGTTCTGGCTGAGGCAAATCTCCTTGAAATATATGTGTTTGATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATGGAATCCTCGTAACATCAGCATTGGCTATCGCTAT ]
[-] EMBL BI514733 [ TGCAAAGTCAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGCAAGC AATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACACCATAATATTGAGCATCTAAGTAGTTAGAAAGAGGTTCTGGCTGAGGCAAATCTCCTTGAAATATATGTGTTTGATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATGGAATCCTCGTAACATCAGCATTGGCTATCGCTATAAAAGCGCAAAAGCACAGAATGGCATGAAACATTTTTAAATAAGTTTCCAGTGCCTTTAAAATTAAAAGATTAAGTTATGTATTAAATAATATTAAATATAGCACTATAGAAAAAAA]
[-] EMBL BI512932 [ GTGTTATCATATTTACGATGTAATTTGCAAGC AATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACCCCATAATATTGAGCATTTAAGTAGTTAGAAAGAGGTNNNGGCTGAGGCAAATCTCCTTGAAATATATGTGTTTGATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATGGAATCCTCGTAACATCAGCATTGGCTATCGCTATAAAAGCGCAAAAGCACAGAATGGCATGAAACATTTTTAAATAAGTTTCCAGTGCCTTTAAAATTAAAAGATTAAGTTATGTATTAAAAAAAAAAAAAA ]
consensusID : consensus_175#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 434 fasta sequence
[GGATTGCAAAGTCAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGCAAGCAATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACCCCATAATATTGAGCATCTAAGTAGTTAGAAAGAGGTTCTGGCTGAGGCAAATCTCCTTGAAATATATGTGTTTGATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATGGAATCCTCGTAACATCAGCATTGGCTATCGCTATAAAAGCGCAAAAGCACAGAATGGCATGAAACATTTTTAAATAAGTTTCCAGTGCCTTTAAAAAAAAAAAAAAAAAGCAACGCGGCCGC]
[-] EMBL BI513499 [GGATTGCAAAGTCAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGCAAGCAATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTATCAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACCCCATAATATTGAGCATCTAAGTAGTTAGAAAGAGGTTCTGGCTGAGGCAAATCTCCTTGAAATATATGTGTTTGATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATGGAATCCTCGTAACATCAGCATTGGCTATCGCTATAAAAGCGCAAAAGCACAGAATGGCATGAAACATTTTTAAATAAGTTTCCAGTGCCTTTAAAAAAAAAAAAAAAAAGCAACGCGGCCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_175#0 CCAATATCAATTCTCCACCATATTTATCATCAGGATTTCTGTTTAAATAAAAACTAAAAA 60
consensus_175#1 ------------------------------------------------------------
consensus_175#0 CAGGTTGAGGTACTAATCCTTGTTTAACCATATTGTAAAATACAGGTGTTACACCATCAA 120
consensus_175#1 ------------------------------------------------------------
consensus_175#0 CAGAAATTTTAGAATAAGCCATTCCTAAGATACCATCAAATTTAGCAGCAACAAAAGCTA 180
consensus_175#1 ------------------------------------------------------------
consensus_175#0 ATCCAGGTTCACTCAAAGCTTCAGCAAAAGTCTGATCAGAAATTTTCATTCCTGCAATAT 240
consensus_175#1 ------------------------------------------------------------
consensus_175#0 CTACAGTATCAGTGGAAAGATAGCCAGAGAGACTTCCAGAGCCATAACGGATTGCAAAGT 300
consensus_175#1 ------------------------------------------------GGATTGCAAAGT 12
************
consensus_175#0 CAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGC 360
consensus_175#1 CAGTACCATTCTTCTTGTATGTAGATGATTTGGTGTTATCATATTTACGATGTAATTTGC 72
************************************************************
consensus_175#0 AAGCAATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTAT 420
consensus_175#1 AAGCAATATTGGTAAGATGACATTTTTTAGAGGGAACCCAGAGATTTGAGGAACCAGTAT 132
************************************************************
consensus_175#0 CAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACACCATAATATTGAG 480
consensus_175#1 CAAAGATTACTCTGAAATCTTGTGGAGGAGTTCCAATGCTAATAACCCCATAATATTGAG 192
********************************************** *************
consensus_175#0 CATCTAAGTAGTTAGAAAGAGGTTCTGGCTGAGGCAAATCTCCTTGAAATATATGTGTTT 540
consensus_175#1 CATCTAAGTAGTTAGAAAGAGGTTCTGGCTGAGGCAAATCTCCTTGAAATATATGTGTTT 252
************************************************************
consensus_175#0 GATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATG 600
consensus_175#1 GATATATTTCTGTGTTATATTCTTTGAATTGTTTCCTAATGCTATCGATTTTGTGCAATG 312
************************************************************
consensus_175#0 GAATCCTCGTAACATCAGCATTGGCTATCGCTATAAAAGCGCAAAAGCACAGAATGGCAT 660
consensus_175#1 GAATCCTCGTAACATCAGCATTGGCTATCGCTATAAAAGCGCAAAAGCACAGAATGGCAT 372
************************************************************
consensus_175#0 GAAACATTTTTAAATAAGTTTCCAGTGCCTTTAAAATTAAAAGATTAA-GTTATGTATTA 719
consensus_175#1 GAAACATTTTTAAATAAGTTTCCAGTGCCTTTAAAAAAAAAAAAAAAAAGCAACGCGGCC 432
************************************ **** * ** * * *
consensus_175#0 AAAAAAAAAAAAAATAGCACTATAGAAAAAAA 751
consensus_175#1 GC------------------------------ 434
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |