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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1941#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 559 fasta sequence
[ATGTTGAGTCGTCTTTCGGCCGTGGTGGCCTCCATTTTGGTTCACCAGCTACACGTTTTGTGTGCCGCCACCTCATTAGGTATACGAGGTGGAAAGTTTCGCAACAGAAACGGGCGGCACTCCAGAACCGAGGCCCTTTTTCGAAGATCCAGAGAGCAACATTACCGTGCAACTCGGTGCTCAAGTATACATGCACTGTAGAGTACAAAACTTGCAGGATACACTCAAGGTGTCCTGGGTGCGCAGACGTGGCGACGAGCTCCACTTGCTCACGATCGGCCTCGACACGTACGCGAGCGACTCGAGGTTCTCGCTCGCCTTGGAGAAGCCGAATGATTGGCGGCTGCTTTTAAGTTCGGCGACCGAACGAGACGGCGGTGTGTACGAGTGTCAAGTCAGTGCTCATCCCCCATTAATCAGAACTGTCCATCTGACGGTGTCAGTGCCGAAGGTAGAGATTGTGGACGAGCACGGGGCAACGGCTGGTGACAAATTTTACAAAGCTGGGAGCACGATAGAATTGAAGTGTGTGGTCAGCAATATACCGCAACCTACCGGA]
[+] EMBL BI508698 [ATGTTGAGTCGTCTTTCGGCCGTGGTGGCCTCCATTTTGGTTCACCAGCTACACGTTTTGTGTGCCGCCACCTCATTAGGTATACGAGGTGGAAAGTTTCGCAACAGAAACGGGCGGCACTCCAGAACCGAGGCCCTTTTTCGAAGATCCAGAGAGCAACATTACCGTGCAACTCGGTGCTCAAGTATACATGCACTGTAGAGTACAAAACTTGCAGGATACACTCAAGGTGTCCTGGGTGCGCAGACGTGGCGACGAGCTCCACTTGCTCACGATCGGCCTCGACACGTACGCGAGCGACTCGAGGTTCTCGCTCGCCTTGGAGAAGCCGAATGATTGGCGGCTGCTTTTAAGTTCGGCGACCGAACGAGACGGCGGTGTGTACGAGTGTCAAGTCAGTGCTCATCCCCCATTAATCAGAACTGTCCATCTGACGGTGTCAGTGCCGAAGGTAGAGATTGTGGACGAGCACGGGGCAACGGCTGGTGACAAATTTTACAAAGCTGGGAGCACGATAGAATTGAAGTGTGTGGTCAGCAATATACCGCAACCTACCGGA]
consensusID : consensus_1941#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 524 fasta sequence
[AGTTGAGAATCGACTACGATGTTGAGTCGTCTTTCGGCCGTGGTGGCCTCCATTTTGGTTCACCAGCTACACGTTTTGTGTGCCGCCACCTCATTAGGTGCTAAGCCGTTTCCTGGACTGGAAAACCTGCCTAGGTCGTTCTGGCATGAGCTCAGTTCGCCTTTTACCGAGGTATACGAGGTGGAAAGTTTCGCAACAGAAACGGGCGGCACTCCAGAACCGAGGCCCTTTTTCGAAGATCCAGAGAGCAACATTACCGTGCAACTCGGTGCTCAAGTATACATGCACTGTAGAGTACAAAACTTGCAGGATACACTCAAGGTGTCCTGGGTGCGCAGACGTGGCGACGAGCTCCACTTGCTCACGATCGGCCTCGACACGTACGCGAGCGACTCGAGGTTCTCGCTCGCCTTGGAGAAGCCGAATGATTGGCGGCTGCTTTTAAGTTCGGCGACCGAACGAGACGGCGGTGTGTACGAGTGTCAAGTCAGTGCTCATCCCCCATTAATCAGAACTGTCCATCT]
[+] EMBL BI504587 [AGTTGAGAATCGACTACGATGTTGAGTCGTCTTTCGGCCGTGGTGGCCTCCATTTTGGTTCACCAGCTACACGTTTTGTGTGCCGCCACCTCATTAGGTGCTAAGCCGTTTCCTGGACTGGAAAACCTGCCTAGGTCGTTCTGGCATGAGCTCAGTTCGCCTTTTACCGAGGTATACGAGGTGGAAAGTTTCGCAACAGAAACGGGCGGCACTCCAGAACCGAGGCCCTTTTTCGAAGATCCAGAGAGCAACATTACCGTGCAACTCGGTGCTCAAGTATACATGCACTGTAGAGTACAAAACTTGCAGGATACACTCAAGGTGTCCTGGGTGCGCAGACGTGGCGACGAGCTCCACTTGCTCACGATCGGCCTCGACACGTACGCGAGCGACTCGAGGTTCTCGCTCGCCTTGGAGAAGCCGAATGATTGGCGGCTGCTTTTAAGTTCGGCGACCGAACGAGACGGCGGTGTGTACGAGTGTCAAGTCAGTGCTCATCCCCCATTAATCAGAACTGTCCATCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1941#0 ------------------ATGTTGAGTCGTCTTTCGGCCGTGGTGGCCTCCATTTTGGTT 42
consensus_1941#1 AGTTGAGAATCGACTACGATGTTGAGTCGTCTTTCGGCCGTGGTGGCCTCCATTTTGGTT 60
******************************************
consensus_1941#0 CACCAGCTACACGTTTTGTGTGCCGCCACCTCATTAGGT--------------------- 81
consensus_1941#1 CACCAGCTACACGTTTTGTGTGCCGCCACCTCATTAGGTGCTAAGCCGTTTCCTGGACTG 120
***************************************
consensus_1941#0 -----------------------------------------------------ATACGAG 88
consensus_1941#1 GAAAACCTGCCTAGGTCGTTCTGGCATGAGCTCAGTTCGCCTTTTACCGAGGTATACGAG 180
*******
consensus_1941#0 GTGGAAAGTTTCGCAACAGAAACGGGCGGCACTCCAGAACCGAGGCCCTTTTTCGAAGAT 148
consensus_1941#1 GTGGAAAGTTTCGCAACAGAAACGGGCGGCACTCCAGAACCGAGGCCCTTTTTCGAAGAT 240
************************************************************
consensus_1941#0 CCAGAGAGCAACATTACCGTGCAACTCGGTGCTCAAGTATACATGCACTGTAGAGTACAA 208
consensus_1941#1 CCAGAGAGCAACATTACCGTGCAACTCGGTGCTCAAGTATACATGCACTGTAGAGTACAA 300
************************************************************
consensus_1941#0 AACTTGCAGGATACACTCAAGGTGTCCTGGGTGCGCAGACGTGGCGACGAGCTCCACTTG 268
consensus_1941#1 AACTTGCAGGATACACTCAAGGTGTCCTGGGTGCGCAGACGTGGCGACGAGCTCCACTTG 360
************************************************************
consensus_1941#0 CTCACGATCGGCCTCGACACGTACGCGAGCGACTCGAGGTTCTCGCTCGCCTTGGAGAAG 328
consensus_1941#1 CTCACGATCGGCCTCGACACGTACGCGAGCGACTCGAGGTTCTCGCTCGCCTTGGAGAAG 420
************************************************************
consensus_1941#0 CCGAATGATTGGCGGCTGCTTTTAAGTTCGGCGACCGAACGAGACGGCGGTGTGTACGAG 388
consensus_1941#1 CCGAATGATTGGCGGCTGCTTTTAAGTTCGGCGACCGAACGAGACGGCGGTGTGTACGAG 480
************************************************************
consensus_1941#0 TGTCAAGTCAGTGCTCATCCCCCATTAATCAGAACTGTCCATCTGACGGTGTCAGTGCCG 448
consensus_1941#1 TGTCAAGTCAGTGCTCATCCCCCATTAATCAGAACTGTCCATCT---------------- 524
********************************************
consensus_1941#0 AAGGTAGAGATTGTGGACGAGCACGGGGCAACGGCTGGTGACAAATTTTACAAAGCTGGG 508
consensus_1941#1 ------------------------------------------------------------
consensus_1941#0 AGCACGATAGAATTGAAGTGTGTGGTCAGCAATATACCGCAACCTACCGGA 559
consensus_1941#1 ---------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |