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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1955#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 621 fasta sequence
[ATCGCGTGACTCCTACTGCTCACATCGTTCATGTTTGTGCTTGCTGTAGTTCTGTGCGTATTACCTCTCACCATGCATTCCTACGTACAGAGAGCAACTTTTTATTTAAAAACTATCTCTCTCAGGAGTATCGTAGTGGAACGAATAGGAAGTGGAGGACGGGTTCATTTACCTGAATGTCTGAATAATCATATACGAGGTGGCTTGACAGGTCTTGGACATAAGGTCCTCTTTTAGGATGTTCCCGCACTCTGAGAGAATGAGACTGTGACTGATCCAGTCTTAGCAAATCCCTTACTCTTTCATTGTGTATTTCCAGGAAAGATACCTCGGTTCTATACGATGCTCCGCTCTCTTTACCAGCAGCCATTCTAGCAAATAATGTCTTACAAATCCGCGGTATCAATCCTTGAGCTTCCTAAGGTTTAAACATAATAAAAAATTATTAGAAGTAAAAAATAGAATTATTTGTGTTATAACAAATTATTGTTATATAATGAGATTATATTTTGAATCAAAGAAAAATTATAGAAATCAGGTGAAAGTTTTAGGCAAACGTTTTGCAATAATTTCTGTACTGATGAAAAGTGAATTGCGATTTAAAGGCATTAGAGCGTATTA]
[+] EMBL BI504523 [ATCGCGTGACTCCTACTGCTCACATCGTTCATGTTTGTGCTTGCTGTAGTTCTGTGCGTATTACCTCTCACCATGCATTCCTACGTACAGAGAGCAACTTTTTATTTAAAAACTATCTCTCTCAGGAGTATCGTAGTGGAACGAATAGGAAGTGGAGGACGGGTTCATTTACCTGAATGTCTGAATAATCATATACGAGGTGGCTTGACAGGTCTTGGACATAAGGTCCTCTTTTAGGATGTTCCCGCACTCTGAGAGAATGAGACTGTGACTGATCCAGTCTTAGCAAATCCCTTACTCTTTCATTGTGTATTTCCAGGAAAGATACCTCGGTTCTATACGATGCTCCGCTCTCTTTACCAGCAGCCATTCTAGCAAATAATGTCTTACAAATCCGCGGTATCAATCCTTGAGCTTCCTAAGGTTTAAACATAATAAAAAATTATTAGAAGTAAAAAATAGAATTATTTGTGTTATAACAAATTATTGTTATATAATGAGATTATATTTTGAATCAAAGAAAAATTATAGAAATCAGGTGAAAGTTTTAGGCAAACGTTTTGCAATAATTTCTGTACTGATGAAAAGTGAATTGCGATTTAAAGGCATTAGAGCGTATTA]
consensusID : consensus_1955#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence
[AATATTTTCTTGGATGGTCATATAATAATACATTCAAAAAAGGCCATTTTAATCTATCCATTTAACTATTCATCTAATTCATCTACTTTCATCTTAATATTTTTGATATGTTACTTTTTTAATCTTTATTTATTTATTAGATTTTAATAATAAAAATGAAAGAGAAAGAAAGAGAGAAAGAGAGAAATAGACAGACAGACAGAGAGATAGAGAGAGAAAAAGACAGAGATTAAATAATGCAATAGTCTTTTACGTGTTTCTTTGACGATTTAAAATAAAAAATATCCTCAGAGTATTCCTTTCAACTACCTTCCAGCCAAGTCGACAAGATGCACCTTGGAAACAGTCTCCGATGGCATATTGCCTTCGGATAGTCCAGCTTGCACGAATGTAATTGTGAAAATCGCGTGACTCCTACTGCTCACATCGTTCATGTTTGTGCTTGCTGTAGTTCTGTGCGTATTA]
[+] EMBL BI516585 [AATATTTTCTTGGATGGTCATATAATAATACATTCAAAAAAGGCCATTTTAATCTATCCATTTAACTATTCATCTAATTCATCTACTTTCATCTTAATATTTTTGATATGTTACTTTTTTAATCTTTATTTATTTATTAGATTTTAATAATAAAAATGAAAGAGAAAGAAAGAGAGAAAGAGAGAAATAGACAGACAGACAGAGAGATAGAGAGAGAAAAAGACAGAGATTAAATAATGCAATAGTCTTTTACGTGTTTCTTTGACGATTTAAAATAAAAAATATCCTCAGAGTATTCCTTTCAACTACCTTCCAGCCAAGTCGACAAGATGCACCTTGGAAACAGTCTCCGATGGCATATTGCCTTCGGATAGTCCAGCTTGCACGAATGTAATTGTGAAAATCGCGTGACTCCTACTGCTCACATCGTTCATGTTTGTGCTTGCTGTAGTTCTGTGCGTATTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1955#0 ATCGCGTGACTCCTACTGCTCACATCGTTCATGTTTGTGCTTGCTGTAGTTCTGTGCGTA 60
consensus_1955#1 -------------------------------AATATTTTCTTGG-ATGGTCATATA-ATA 27
* * * **** * ** * * **
consensus_1955#0 TTACCTCTCACCATG--CATTCCTACGTACAGAGAGCAACTTTTTATTTAAAAACTATCT 118
consensus_1955#1 ATACATTCAAAAAAGGCCATTTTAATCTATCCATT-TAACTATTCATCTAA--TTCATCT 84
*** * * * * **** * ** * **** ** ** *** ****
consensus_1955#0 CTCTCAGGAGTATCGTAGTGGAACGAATAGGAAGTGGAGGACGGGTTCATTTACCTGAAT 178
consensus_1955#1 ACTTTCATCTTAATATTTTTGA-TATGTTACTTTTTTAATCTTTATTTATTTATTAGATT 143
* ** * * ** * * * ** ***** ** *
consensus_1955#0 GTCTGAATAATCATATACGAGGTGGCTTGACAGGTCTTGGACATAAGGTCCTCTTTTAGG 238
consensus_1955#1 TTAATAATAAAAATGAAAGAGAAAGAAAGAGAGAAAGAGAGAAATAGACAGACAGACAGA 203
* ***** ** * *** * ** ** * * ** * **
consensus_1955#0 ATGTTCCCGCACTCTGAGAGAATGAGACTGTGACTGATCCAGTCTTAGCAAATCCCTTAC 298
consensus_1955#1 GAG-------ATAGAGAGAGAAAAAGACAGAGATTAAATAATGC---AATAGTCTTTTAC 253
* * ******* **** * ** * * * * * ** ****
consensus_1955#0 -TCTTTCATTGTGTATTTCCAGGAAAGATACCTCGGTTCTATACGATGCTCCGCTCTCTT 357
consensus_1955#1 GTGTTTCTTTGACGATTTAAAATAAAAA------ATATCCTCAGAGTATTCCTTTCAACT 307
* **** *** **** * *** * ** * * *** ** *
consensus_1955#0 TACCAGCAGCCATTCTAGCAAATAATGTCTTACAAATCCGCGGTATCAATCCTTGAGCTT 417
consensus_1955#1 ACCTTCCAGCCAAGTCGACAAGATGCACCTTGGAAACAGTCTCCGATGGCATATTGCCTT 367
* ****** *** *** *** * * ***
consensus_1955#0 CCTAAGGTTTAAACATAATAAAAAATTATTAGAAGTAAAAAATAGAATTATTTGTGTTAT 477
consensus_1955#1 CGGATAGTCCAG-CTTGCACGAATGTAATTGTG-----AAAATCGCGTGACTCCTACTGC 421
* * ** * * * ** * *** ***** * * * * * *
consensus_1955#0 AACAAATTATTGTTATATAATGAGATTATATTTTGAATCAAAGAAAAATTATAGAAATCA 537
consensus_1955#1 T-CACATCGTTCATGTTTGTGCTTGCTGTAGTTCTGTGCGTATTA--------------- 465
** ** ** * * * * ** ** * * *
consensus_1955#0 GGTGAAAGTTTTAGGCAAACGTTTTGCAATAATTTCTGTACTGATGAAAAGTGAATTGCG 597
consensus_1955#1 ------------------------------------------------------------
consensus_1955#0 ATTTAAAGGCATTAGAGCGTATTA 621
consensus_1955#1 ------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |