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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_213#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 798 fasta sequence
[TCTCGTTTATTCAACACTTACTTTTATCATACATCCTTACGCGTAAGATCTACATAAAAACTTATTAAAACGAGCTTAATCATATGTTCATAACTGGTTCTGGGCTGGGGCAGCTTCGCGTGACGCTTCGGTGCACGGTGTTTCCGTTCGCCAGGCGCGAAACAATCAAGGAGCCTGATCCTTCGGTGCTGAAGAGGTTCGAGTTGGCCGTGCCGAAGGACGCTCACGTGGGCCAGGATTCTTGTACGCGGACGTTGCTCGTCGCGTTCCAATCCCATGCCCGAACGGATTCCGAGTAACAGCCGGTTTCTGGATTCAACATTTTGCGCTCACTCTCGGC---CATGTGCGTTAGAGGTGGAATCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTGAGATCACCCTGAGTTTGTTGGGTCTGTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGCCACCGGCGGCAGCCGTCGACGACGCGCCCGTGGGCGTCGGTGTGTGTATCCCACCGCTCGCGGGACTCGTCGGCTCCGATTTTATACTACTACCGCTGGGACTGTGGCTTGACATTTGAGATCCCGGCTGCGCTTGATGATAAGGTGAGGGCGATCCACCCGGCACGGTGGTGCTCCCGTAACCACCGTAACCGTTCATGTAGCTGTTTATCGGGCTCGGGCTACCGCCGCCCATGTGGTGGCCCATGTCGTACCTCG]
[+] EMBL BI504651 [TCTCGTTTATTCAACACTTACTTTTATCATACATCCTTACGCGTAAGATCTACATAAAAACTTATTAAAACGAGCTTAATCATATGTTCATAACTGGTTCTGGGCTGGGGCAGCTTCGCGTGACGCTTCGGTGCACGGTGTTTCCGTTCGCCAGGCGCGAAACAATCAAGGAGCCTGATCCTTCGGTGCTGAAGAGGTTCGAGTTGGCCGTGCCGAAGGACGCTCACGTGGGCCAGGATTCTTGTACGCGGACGTTGCTCGTCGCGTTCCAATCCCATGCCCGAACGGATTCCGAGTAACAGCCGGTTTCTGGATTCAACATTTTGCGCTCACTCTCGGC CATGTGCGTTAGAGGTGGAATCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTGAGATCACCCTGAGTTTGTTGGGTCTGTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGCCACCGGCGGCAGCCGTCGACGACGCGCCCGTGGGCGTCGGTGTGTGTATCCCACCGCTCGCGGGACTCGTCGGCTCCGATT ]
[+] EMBL BI512558 [TCTCGTTTATTCAACACTTACTTTTATCATACATCCTTACGCGTAAGATCTACATAAAAACTTATTAAAACGAGCTTAATCATATGTTCATAACTGGTTCTGGGCTGGGGCAGCTTCGCGTGACGCTTCGGTGCACGGTGTTTCCGTTCGCCAGGCGCGAAACAATCAAGGAGCCTGATCCTTCGGTGCTGAAGAGGTTCGAGTTGGCCGTGCCGAAGGACGCTCACGTGGGCCAGGATTCTTGTACGCGGACGTTGCTCGTCGCGTTCCAATCCCATGCCCGAACGGATTCCGAGTAACAGCCGGTTTCTGGATTCAACATTTTGCGCTCACTCTCGGC CATGTGCGTTAGAGGTGGAATCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTGAGATCACCCTG ]
[+] EMBL BI507678 [ AACAATCAAGGAGCCTGATCCTTCGGTGCTGAAGAGGTTCGAGTTGGCCGTGCCGAAGGACGCTCACGTGGGCCAGGATTCTTGTACGCGGACGTTGCTCGTCGCGTTCCAATCCCATGCCCGAACGGATTCCGAGTAACAGCCGGTTTCTGGATTCAACATTTTGCGCTCACTCTCGGC CATGTGCGTTAGAGGTGGAATCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTGAGATCACCCTGAGTTTGTTGGGTCTGTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGCCACCGGCGGCAGCCGTCGACGACGCGCCCGTGGGCGTCGGTGTGTGTATCCCACCGCTCGCGGGACTCGTCGGCTCCGATTTTATACTACTACCGCTGGGACTGTGGCTTGACATTTGAGATCCCGGCTGCGCTTGATGATAAGGTGAGGGCGATCCACCCGGCACGGTGGTGCTCCCGTAACCACCGTAACCGTTCATGTAGCTGTTTA ]
[+] EMBL BI507707 [ cttCTGTATCTAAGCTATCATGTGCGTTAGAGGTGGAATCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTGAGATCACCCTGAGTTTGTTGGGTCTGTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGCCACCGGCGGCAGCCGTCGACGACGCGCCCGTGGGCGTCGGTGTGTGTATCCCACCGCTCGCGGGACTCGTCGGCTCCGATTTTATACTACTACCGCTGGGACTGTGGCTTGACATTTGAGATCCCGGCTGCGCTTGATGATAAGGTGAGGGCGATCCACCCGGCACGGTGGTGCTCCCGTAACCACCGTAACCGTTCATGTAGCTGTTTATCGGGCTCGGGCTACCGCCGCCCATGTGGTGGCCCATGTCGTACCTCG]
[+] EMBL BI507305 [ TCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTGAGATCACCCTGAGTTTGTTGGGTCTGTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGCCACCGGCGGCAGCCGTCGACGACGCGCCCGTGGGCGTCGGTGTGTGTATCCCACCGCTCGCGGGACTCGTCGGCTCCGATTTTATACTACTACCGCTGGGACTGTGGCTTGACATTTGAGATCCCGGCTGCGCTTGATGATAAGGTGAGGGCGATCCACCCGGCACGGTGGTGCTCCCGTAACCACCGTAACCGTTCATGTAGCTGTTTATCGGGCTCGGGCTACCGCCGCCCATGTGGTGGCCCATGTCGTACCTCG]
consensusID : consensus_213#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence
[TCGGAATTCATCAGCGTATTATAACAATCCCAATATGTTATTCTCGCGGTCGGTNTTTTTTTATATTTTCTTTTTCTTCTTCCTCTGTCTCTCTCTGTTTCTTTTTTCTTTTTTTCTTTCTTTTTTACTTATACTCGTTCTCTCTTTCTTTCTCTTTCTCTCTCTCTCTCGTTAGAACATCATCTTCATACTTTCAAAGTTGTCCCAAAGTGTTACGCACGTTGTCCTCTCTTCTGTATCTAAGCTATCATGTGCGTTAGAGGTGGAATCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTNAGATCACCCTGAGTTTGTTGGGTNTNTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGCCACC]
[+] EMBL BI507812 [TCGGAATTCATCAGCGTATTATAACAATCCCAATATGTTATTCTCGCGGTCGGTNTTTTTTTATATTTTCTTTTTCTTCTTCCTCTGTCTCTCTCTGTTTCTTTTTTCTTTTTTTCTTTCTTTTTTACTTATACTCGTTCTCTCTTTCTTTCTCTTTCTCTCTCTCTCTCGTTAGAACATCATCTTCATACTTTCAAAGTTGTCCCAAAGTGTTACGCACGTTGTCCTCTCTTCTGTATCTAAGCTATCATGTGCGTTAGAGGTGGAATCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGCCATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTNAGATCACCCTGAGTTTGTTGGGTNTNTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGCCACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_213#0 TCTCGTTTATTCAACACTTACTTTTATCATACATCCTTACGCGTAAGATCTACATAAAAA 60
consensus_213#1 ------------------------------------------------------------
consensus_213#0 CTTATTAAAACGAGCTTAATCATATGTTCATAACTGGTTCTGGGCTGGGGCAGCTTCGCG 120
consensus_213#1 ---------TCGGAATTCATCAGCGTATTATAAC-AATCCCAATATGTTATTCTCGCGGT 50
** ** **** * ***** * * ** **
consensus_213#0 TGACGCTTCGGTGCACGGTGTTTCCGTTCGCCAGGCGCGAAACAATCAAGGAGCCTGATC 180
consensus_213#1 CGGTNTTTTTTTATATTTTCTTTTTCTTCTTCCTCTGT----CTCTC------TCTGTTT 100
* ** * * * *** *** * * * ** *** *
consensus_213#0 CTTCGGTGCTGAAGAGGTTCGAGTTGGCCGTGCCGAAGGACGCTCACGTGGGCCAGGATT 240
consensus_213#1 CTTTTTTCTT-------TTTTTCTT--TCTTTTTTACTTATACTCGTTCTCTCTTTCTTT 151
*** * * ** ** * * * * *** * **
consensus_213#0 CTTGTACGCGGACGTTGCTCGTCGCGTTCCAATCCCATGCCCGAACGGATTCCGAGTAAC 300
consensus_213#1 CTCTTTCTCTCTCTCTCTCGTTAGAACATCATCTTCATACTTTCAAAGTTGTCCCAAAGT 211
** * * * * * * * ** *** * * * * * *
consensus_213#0 AGCCGGTTTCTGGATTCAACATTTTGCGCTCACTCTCGGCCATGTGCGTTAGAGGTGGAA 360
consensus_213#1 GTTACGCACGTTG-TCCTCTCTTCTGTATCTAAGCT--ATCATGTGCGTTAGAGGTGGAA 268
* * * * * ** ** * ** ********************
consensus_213#0 TCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGC 420
consensus_213#1 TCGCCGTGTGATGCTGCGCCAAGGGATCGGGAGATGGTCCAGGTGAGTAGACACCGGCGC 328
************************************************************
consensus_213#0 CATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTGA 480
consensus_213#1 CATGTTGGACGACTCCCTGTTCCACTCCTTGAGGCAAATACATGGAGATCATTTGCCTNA 388
********************************************************** *
consensus_213#0 GATCACCCTGAGTTTGTTGGGTCTGTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGC 540
consensus_213#1 GATCACCCTGAGTTTGTTGGGTNTNTTGTTGGCCCATGTATTCCCGTTTAACTATTTGGC 448
********************** * ***********************************
consensus_213#0 CACCGGCGGCAGCCGTCGACGACGCGCCCGTGGGCGTCGGTGTGTGTATCCCACCGCTCG 600
consensus_213#1 CACC-------------------------------------------------------- 452
****
consensus_213#0 CGGGACTCGTCGGCTCCGATTTTATACTACTACCGCTGGGACTGTGGCTTGACATTTGAG 660
consensus_213#1 ------------------------------------------------------------
consensus_213#0 ATCCCGGCTGCGCTTGATGATAAGGTGAGGGCGATCCACCCGGCACGGTGGTGCTCCCGT 720
consensus_213#1 ------------------------------------------------------------
consensus_213#0 AACCACCGTAACCGTTCATGTAGCTGTTTATCGGGCTCGGGCTACCGCCGCCCATGTGGT 780
consensus_213#1 ------------------------------------------------------------
consensus_213#0 GGCCCATGTCGTACCTCG 798
consensus_213#1 ------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |