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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2235#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence
[ATTTATCAAATGTTGGTCAAGCTCAATGATAAATTTGCTTAAATTGCCGCACGATATCTTTCCCCAAGTGGTGGAGACAAGTGGAAATTTCGGCAGTACCCCAAAAGATTTATTCGGGGTCGAAATTCCGATATTATGTTCAACGACAGATCAATCGGCATCGTTGTTCGGCTCGATGTGTATGCAACCGGGAGATTTGAAAATCACCATGGGAACTGGCACGTTTTTGAACGTGAACACGGGTGATATCCCGCACGCTTCTGTCGCAGGACTTTATCCTCTGATCGCGTGGCAAACAGGAGATGAATTAGTATACATGGCAGAAGGTGCATGGAACGAAACTGGAGGTATCATTGAGTGGGCCAAAGAAATAAGTCTAATCGACCAAGTAGCAGAAACAGCAAATATCGCGAACTCGGTGAACGATTCTGATGGAGTGTATTTCTTTCCTGCATTCAGTGGATTACACGCGCCGATAAATGATTACAGGGCAGCGGCAGGTTTCATAGGCCTAAAACCTACCACAAGAAAGAATCATTTGGTTCGAGCGTTGTTAGAAAGTATAGTTTTTGGAA]
[+] EMBL BI504899 [ATTTATCAAATGTTGGTCAAGCTCAATGATAAATTTGCTTAAATTGCCGCACGATATCTTTCCCCAAGTGGTGGAGACAAGTGGAAATTTCGGCAGTACCCCAAAAGATTTATTCGGGGTCGAAATTCCGATATTATGTTCAACGACAGATCAATCGGCATCGTTGTTCGGCTCGATGTGTATGCAACCGGGAGATTTGAAAATCACCATGGGAACTGGCACGTTTTTGAACGTGAACACGGGTGATATCCCGCACGCTTCTGTCGCAGGACTTTATCCTCTGATCGCGTGGCAAACAGGAGATGAATTAGTATACATGGCAGAAGGTGCATGGAACGAAACTGGAGGTATCATTGAGTGGGCCAAAGAAATAAGTCTAATCGACCAAGTAGCAGAAACAGCAAATATCGCGAACTCGGTGAACGATTCTGATGGAGTGTATTTCTTTCCTGCATTCAGTGGATTACACGCGCCGATAAATGATTACAGGGCAGCGGCAGGTTTCATAGGCCTAAAACCTACCACAAGAAAGAATCATTTGGTTCGAGCGTTGTTAGAAAGTATAGTTTTTGGAA]
consensusID : consensus_2235#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 544 fasta sequence
[CGTTGTTCGGCTCGATGTGTATGCAACCGGGAGATTTGAAAATCACCATGGGAACTGGCACGTTTTTGAACGTGAACACGGGTGATATCCCGCACGCTTCTGTCGCAGGACTTTATCCTCTGATCGCGTGGCAAACAGGAGATGAATTAGTATACATGGCAGAAGGTGCATGGAACGAAACTGGAGGTATCATTGAGTGGGCCAAAGAAATAAGTAATTTCTTATGATGAAAATTTTTTTGCTCTACTACGATCAAAATTTCCATAAATTTGCATATTTTTTTTTTATAATTAATTTTAATATTTTCTCGATTCTTTCTTAAAAAAAAAAAAGATTAATATCGCTTATTCAACAAGAAAGGAAAATCTTTTAATCAAATAGTATAATTTGAAGTAAACTGGTCAACGAAACGCTAGAATTTCAAAGATGCAGTTTGTTTCAGGTCTAATCGACCAAGTAGCAGAAACAGCAAATATCGCGAACTCGGTGAACGATTCTGATGGAGTGTATTTCGTTCCTGCATTCAGTGGATTACACGCGCCGA]
[+] EMBL BI503777 [CGTTGTTCGGCTCGATGTGTATGCAACCGGGAGATTTGAAAATCACCATGGGAACTGGCACGTTTTTGAACGTGAACACGGGTGATATCCCGCACGCTTCTGTCGCAGGACTTTATCCTCTGATCGCGTGGCAAACAGGAGATGAATTAGTATACATGGCAGAAGGTGCATGGAACGAAACTGGAGGTATCATTGAGTGGGCCAAAGAAATAAGTAATTTCTTATGATGAAAATTTTTTTGCTCTACTACGATCAAAATTTCCATAAATTTGCATATTTTTTTTTTATAATTAATTTTAATATTTTCTCGATTCTTTCTTAAAAAAAAAAAAGATTAATATCGCTTATTCAACAAGAAAGGAAAATCTTTTAATCAAATAGTATAATTTGAAGTAAACTGGTCAACGAAACGCTAGAATTTCAAAGATGCAGTTTGTTTCAGGTCTAATCGACCAAGTAGCAGAAACAGCAAATATCGCGAACTCGGTGAACGATTCTGATGGAGTGTATTTCGTTCCTGCATTCAGTGGATTACACGCGCCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2235#0 ATTTATCAAATGTTGGTCAAGCTCAATGATAAATTTGCTTAAATTGCCGCACGATATCTT 60
consensus_2235#1 ------------------------------------------------------------
consensus_2235#0 TCCCCAAGTGGTGGAGACAAGTGGAAATTTCGGCAGTACCCCAAAAGATTTATTCGGGGT 120
consensus_2235#1 ------------------------------------------------------------
consensus_2235#0 CGAAATTCCGATATTATGTTCAACGACAGATCAATCGGCATCGTTGTTCGGCTCGATGTG 180
consensus_2235#1 -----------------------------------------CGTTGTTCGGCTCGATGTG 19
*******************
consensus_2235#0 TATGCAACCGGGAGATTTGAAAATCACCATGGGAACTGGCACGTTTTTGAACGTGAACAC 240
consensus_2235#1 TATGCAACCGGGAGATTTGAAAATCACCATGGGAACTGGCACGTTTTTGAACGTGAACAC 79
************************************************************
consensus_2235#0 GGGTGATATCCCGCACGCTTCTGTCGCAGGACTTTATCCTCTGATCGCGTGGCAAACAGG 300
consensus_2235#1 GGGTGATATCCCGCACGCTTCTGTCGCAGGACTTTATCCTCTGATCGCGTGGCAAACAGG 139
************************************************************
consensus_2235#0 AGATGAATTAGTATACATGGCAGAAGGTGCATGGAACGAAACTGGAGGTATCATTGAGTG 360
consensus_2235#1 AGATGAATTAGTATACATGGCAGAAGGTGCATGGAACGAAACTGGAGGTATCATTGAGTG 199
************************************************************
consensus_2235#0 GGCCAAAGAAATAAGTCTAATCGACCAAGTAGCAGAAACAGCAAATATCGCGAACTCGGT 420
consensus_2235#1 GGCCAAAGAAATAAG--TAATTTCTTATG----ATGAAAATTTTTTTGCTCTACTACGAT 253
*************** **** * * * ** * * * * * ** *
consensus_2235#0 GAACGATTCTGATGGAGTGTATTTCTTTCCTGCATTCAGTGGATTACACGCGCCGATAAA 480
consensus_2235#1 CAAAATTTCCATAAATTTGCATATTTTTTTTTTATA-ATTAATTTTAATATTTTCTCGAT 312
** *** ** ** * *** * ** * * ** * *
consensus_2235#0 TGATTACAGGGCAGCGGCAGGTTTCATAGGCCTAAAACCTACCACAAGAAAGAATCATTT 540
consensus_2235#1 TCTTTCTTAAAAAAAAAAAAGATTAATATCGCTTAT-TCAACAAGAAAGGAAAATCTTTT 371
* ** * * * ** *** ** * * ** * ** * **** ***
consensus_2235#0 GGTTCGAGCGT-TGTTAGAAAGTA---TAGTTTTTGGAA--------------------- 575
consensus_2235#1 AATCAAATAGTATAATTTGAAGTAAACTGGTCAACGAAACGCTAGAATTTCAAAGATGCA 431
* * ** * * ***** * ** * **
consensus_2235#0 ------------------------------------------------------------
consensus_2235#1 GTTTGTTTCAGGTCTAATCGACCAAGTAGCAGAAACAGCAAATATCGCGAACTCGGTGAA 491
consensus_2235#0 -----------------------------------------------------
consensus_2235#1 CGATTCTGATGGAGTGTATTTCGTTCCTGCATTCAGTGGATTACACGCGCCGA 544
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |