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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2262#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence
[TTTTTTTTTTTGTATGCGTTTGTTTTTTTTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTCCCTTTTTTTATCGTTGTTGTTGTTGTTGCTGTTGTTGTTGCATTGTTATTTTTGCCATCATTAGCATGATCGTATCGTCATTGTTACCATCGATCGTGAATGATAATTTTGTTGCTTGTGATGAGAGAGGAAAGTAAAAAAAGGANGAAAAAGAAAAAGAAAAAAAAGAAAAAAAAAAGACGNNNTAACGCGATAGCAGAAGAAATCATATGTACCTATGTATTTATGTATTATTTATTGACAATTAATAACGACCAGCTGTTTAGGTAGGATATTAAAAT]
[+] EMBL BI503707 [TTTTTTTTTTTGTATGCGTTTGTTTTTTTTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTCCCTTTTTTTATCGTTGTTGTTGTTGTTGCTGTTGTTGTTGCATTGTTATTTTTGCCATCATTAGCATGATCGTATCGTCATTGTTACCATCGATCGTGAATGATAATTTTGTTGCTTGTGATGAGAGAGGAAAGTAAAAAAAGGANGAAAAAGAAAAAGAAAAAAAAGAAAAAAAAAAGACGNNNTAACGCGATAGCAGAAGAAATCATATGTACCTATGTATTTATGTATTATTTATTGACAATTAATAACGACCAGCTGTTTAGGTAGGATATTAAAAT]
consensusID : consensus_2262#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 408 fasta sequence
[TTTTTTTTGTATNCGTTTGTTTTTCTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTTCCTTTTTTTTTTTTGCGTTGTTGTTGGTGGTTTGTTGTTGTTGCTCCTAAAAAAAAAAAAAAATTCCAAAGGGCGTTGTTTCGATACTTGTCACACACATACACACGACAGACCACGGGTTGGTGGTACAGGGCGTCCTGCGTTCGGGGGTCAATATGATTTATAGCGAGCTGTCCCGCTGGCGTTTTTCTTTTAAACCTATGAAGAAACTAAGAGAATGAATTTATATCTTTTTTTTTTTTTCTTTTCC]
[-] EMBL BI505983 [TTTTTTTTGTATNCGTTTGTTTTTCTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTTCCTTTTTTTTTTTTGCGTTGTTGTTGGTGGTTTGTTGTTGTTGCTCCTAAAAAAAAAAAAAAATTCCAAAGGGCGTTGTTTCGATACTTGTCACACACATACACACGACAGACCACGGGTTGGTGGTACAGGGCGTCCTGCGTTCGGGGGTCAATATGATTTATAGCGAGCTGTCCCGCTGGCGTTTTTCTTTTAAACCTATGAAGAAACTAAGAGAATGAATTTATATCTTTTTTTTTTTTTCTTTTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2262#0 TTTTTTTTTTTGTATGCGTTTGTTTTTTTTTCTCACATTTAAGAAACTCGAAACAAGCCC 60
consensus_2262#1 ---TTTTTTTTGTATNCGTTTGTTTTTCTT-CTCACATTTAAGAAACTCGAAACAAGCCC 56
************ *********** ** *****************************
consensus_2262#0 TGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAA 120
consensus_2262#1 TGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAA 116
************************************************************
consensus_2262#0 GTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTCCCTTTTTTTATCGT-TGT 179
consensus_2262#1 GTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTTCCTTTTTTTTTTTTGCGT 176
***************************************** ********* * * **
consensus_2262#0 TGTTGTTGTTG--CTGTTGTTGTTGCATTGTTATTTTTGCCATCATTAGCATGATCGTAT 237
consensus_2262#1 TGTTGTTGGTGGTTTGTTGTTGTTGCTCCTAAAAAAAAAAAAAAATTCCAAAGGGCGTTG 236
******** ** ************ * * *** * * ***
consensus_2262#0 CGTCATTG-TTACCATCGAT-CGTGAATGATAATTTTGTTGCTTGTGATGAGAGAGGAAA 295
consensus_2262#1 TTTCGATACTTGTCACACACATACACACGACAGACCACGGGTTGGTGGTACAGGGCGTCC 296
** * ** ** * * ** * * * *** * * *
consensus_2262#0 GTAAAAAAAGGANGAAAAAGAAAAAGAAAAAAAAGAAAAAAAAAAGACGNNNT---AACG 352
consensus_2262#1 TGCGTTCGGGGGTCAATATGATTTATAGCGAGCTGTCCCGCTGGCGTTTTTCTTTTAAAC 356
** ** * ** * * * * * * **
consensus_2262#0 CGATAGCAGAAGAAATCATATGTACCTATGTATTTATGTATTATTTATTGACAATTAATA 412
consensus_2262#1 CTATGAAGAAACTAAGAGAATGAATTTATATCTTTTTTTTTTTTTCTTTTCC-------- 408
* ** ** ** *** * *** * *** * * ** ** ** *
consensus_2262#0 ACGACCAGCTGTTTAGGTAGGATATTAAAAT 443
consensus_2262#1 -------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |