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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2273#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence
[TAATCATTAATATATATTTTTTTTAATAGTTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAGTAAAGAAAATTTCAAATACGCTGGCGTATGTTTCTTGTTAGTTGCATAAATGATTTGCACCAGATCTCTAGTTAAGCAATTGTTCAGAGTATAGTATAATTTTAAATAATGTACAGTCACATTCTCTATGTTAATAACATCATCGTTGTCATTTTCAATCTTCCATATTCAAAGAGTTTTTACATATATTTTTATTCATATTTTTAAAGTTATTGCATATATAAATTGTTATCGTGAAAATATTCTAATTGAAAGCATTTCATTATTCACTTTGAATCATATAGTGATATTTAAGAAAGAAATAAAGTTATAAATTGTATTTTTATGAAAAAATCTTTNNNAAATATAATTCCTAAAAGGAATTGATATTGATTTTATCATATATCTTTGAATGTTTGTA]
[+] EMBL BI513336 [TAATCATTAATATATATTTTTTTTAATAGTTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAGTAAAGAAAATTTCAAATACGCTGGCGTATGTTTCTTGTTAGTTGCATAAATGATTTGCACCAGATCTCTAGTTAAGCAATTGTTCAGAGTATAGTATAATTTTAAATAATGTACAGTCACATTCTCTATGTTAATAACATCATCGTTGTCATTTTCAATCTTCCATATTCAAAGAGTTTTTACATATATTTTTATTCATATTTTTAAAGTTATTGCATATATAAATTGTTATCGTGAAAATATTCTAATTGAAAGCATTTCATTATTCACTTTGAATCATATAGTGATATTTAAGAAAGAAATAAAGTTATAAATTGTATTTTTATGAAAAAATCTTTNNNAAATATAATTCCTAAAAGGAATTGATATTGATTTTATCATATATCTTTGAATGTTTGTA]
consensusID : consensus_2273#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 286 fasta sequence
[AATTGTACAATATGTTTGCGAAGTAGTTTCTAATCGCGCAGCTCTTCTTGTTTCAATATGCCTAGCAGTTTTATTAAAGCGAATTGACAGAAAACATGTAACAATCGCTGTAGATGGATCTCTATACAAGCATCATCCTCGACTAGAGACATGGATCAAACAGTACATTCCATTATTAGCTCCTGATCACAAATTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAG]
[+] EMBL BI511560 [AATTGTACAATATGTTTGCGAAGTAGTTTCTAATCGCGCAGCTCTTCTTGTTTCAATATGCCTAGCAGTTTTATTAAAGCGAATTGACAGAAAACATGTAACAATCGCTGTAGATGGATCTCTATACAAGCATCATCCTCGACTAGAGACATGGATCAAACAGTACATTCCATTATTAGCTCCTGATCACAAATTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2273#0 TAATCATTAATATATATTTTTTTTAATAGTTCAAGATGATCCATGCTGAGGATGGAAGTG 60
consensus_2273#1 ------------------------------------------------------------
consensus_2273#0 GGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAAT 120
consensus_2273#1 ------------------------------------------------------------
consensus_2273#0 AGTAAAGAAAATTTCAAATACGCTGGCGTATGTTTCTTGTTAGTTGCATAAATGATTTGC 180
consensus_2273#1 ------------------------------------------------------------
consensus_2273#0 ACCAGATCTCTAGTTAAGCAATTGTTCAGAGTATAGTATAATTTTAAA-TAATGTACAGT 239
consensus_2273#1 --------------------------AATTGTACAATATGTTTGCGAAGTAGTTTCTAAT 34
* *** * *** ** ** ** * * * *
consensus_2273#0 CACATTCTCTATGTTAATAACATCATCGTTGTCATTTTCAATCTTCCATATTCAAAGAGT 299
consensus_2273#1 CGCGCAG-CTCTTCTTGTTTCAATATGCCTAGCAGTTTTATTAAAGCGAATTGACAGAAA 93
* * ** * * * ** ** * ** *** * * * *** * ***
consensus_2273#0 TTTTACATATATTTTTATTCATATTTTTAAAGTTATTGCATATATAAATTGTTATCGTGA 359
consensus_2273#1 ACATGTAACAATCGCTGTAGATGGATCTCTA-----TACAAGCATCATCCTCGACTAGAG 148
* * ** * * ** * * * * ** ** * *
consensus_2273#0 AAATATTCTAATTGAAAGCATTTCATTATTCACTTTGAATCATATAGTGATATTTAAGAA 419
consensus_2273#1 ACATGGATCAAAC-AGTACATTCCATTATTAGCTCCTGATCACAAA------TTCAAGAT 201
* ** ** * **** ******* ** **** * * ** ****
consensus_2273#0 AGAAATAAAGTTATAAATTGTATTTTTATGAAAAAATCTTTNNNAAATATAATTCCTAAA 479
consensus_2273#1 --GATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAA 259
* * * * ** * * * * * * * **** * **
consensus_2273#0 AGGAATTGATATTGATTTTATCATATATCTTTGAATGTTTGTA 522
consensus_2273#1 AGACTTCAGAATAGATTAGATTA-ATAG--------------- 286
** * ** **** ** * ***
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |