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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2458#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 550 fasta sequence
[GCACGCGAGAATCGCGGCTCTGAACGAGGCGCTCGTCGAGGGACTTTTGAGAAGGGACGATTTGCACATGGAACAAGATTCGATGCTCGTCGACGTCGAAGATCTCACCAGATATCTAGGTGCCAAGCAGGAGTCGTTGAAGAAGAAGCAGAACGCGAGGGAGCAGCAGTGCACGGGGAGCAGCAGAAGTCATCATCAGCAGGGCGGCAACCCGGGCCAGAACAAATCGTCGTCGATCAAGCCGAAGCTGACGCACCGTGGCCTGGTCTCGTTGGTGAGGAAATAATGCCTCGCCACGAGACTGCGCGGTCTCGTCGGAAATTAAGCGGGGAAGGCTTACCTTCCCGAGAGAGGACGCGAGCAAGTATACGCAATTAACATCTGCTCGATTCGATCTGCCGATCTCTCGCCCCTCCCTCCCCGATCGAACAATTTCTCGAACTCGACTCCCGGTTCCGGTATGCTGGAACGATCGCCCTTCCCTGCCCTCCCTCCTCCTCCTCCCTCTCGAGAGGAAGGGAACGAGAAACGAGAGATTTATTCGGACGAA]
[+] EMBL BI503262 [GCACGCGAGAATCGCGGCTCTGAACGAGGCGCTCGTCGAGGGACTTTTGAGAAGGGACGATTTGCACATGGAACAAGATTCGATGCTCGTCGACGTCGAAGATCTCACCAGATATCTAGGTGCCAAGCAGGAGTCGTTGAAGAAGAAGCAGAACGCGAGGGAGCAGCAGTGCACGGGGAGCAGCAGAAGTCATCATCAGCAGGGCGGCAACCCGGGCCAGAACAAATCGTCGTCGATCAAGCCGAAGCTGACGCACCGTGGCCTGGTCTCGTTGGTGAGGAAATAATGCCTCGCCACGAGACTGCGCGGTCTCGTCGGAAATTAAGCGGGGAAGGCTTACCTTCCCGAGAGAGGACGCGAGCAAGTATACGCAATTAACATCTGCTCGATTCGATCTGCCGATCTCTCGCCCCTCCCTCCCCGATCGAACAATTTCTCGAACTCGACTCCCGGTTCCGGTATGCTGGAACGATCGCCCTTCCCTGCCCTCCCTCCTCCTCCTCCCTCTCGAGAGGAAGGGAACGAGAAACGAGAGATTTATTCGGACGAA]
consensusID : consensus_2458#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 548 fasta sequence
[ACACCGGCTCGAATTCGGCCCCGATCGACGAGGCCGATTTCTTCGCAAGGCAGGCGAGATTGCAAACCGAGGCACGAATGGCCTTGGCTCAGGCCAAAGAAATGGCCCACATGCAGATGGAAGTGGAGAGGCAAAGGCTGAAACAGAGCCCCATCACCGAGATGGTGCGATCCAGCCTCGAAAAAGTTGGCGTTCAACTCGGCGAGGATAGGCGCAGATTGTCACGAGTACTTTTAACGGAGCTAAACGTCGCCCAGCTTCAAGTGGTGGCGAACGACTTGCACGCGAGAATCGCGGCTCTGAACGAGGCGCTCGTCGAGGGACTTTTGAGAAGGGACGATTTGCACATGGAACAAGATTCGATGCTCGTCGACGTCGAAGATCTCACCAGATATCTCTTCTGCTGCGTTCACATGCACAGAGGTGCCAAGCAGGAGTCGTTGAAGAAGAAGCAGAACGCGAGGGAGCAGCAGTGCACGGGGAGCAGCAGAAGTCATCATCAGCAGGGCGGCAACCCGGGCCAGAACAAATCGTCGTCGATCAAGCCG]
[+] EMBL BI506001 [ACACCGGCTCGAATTCGGCCCCGATCGACGAGGCCGATTTCTTCGCAAGGCAGGCGAGATTGCAAACCGAGGCACGAATGGCCTTGGCTCAGGCCAAAGAAATGGCCCACATGCAGATGGAAGTGGAGAGGCAAAGGCTGAAACAGAGCCCCATCACCGAGATGGTGCGATCCAGCCTCGAAAAAGTTGGCGTTCAACTCGGCGAGGATAGGCGCAGATTGTCACGAGTACTTTTAACGGAGCTAAACGTCGCCCAGCTTCAAGTGGTGGCGAACGACTTGCACGCGAGAATCGCGGCTCTGAACGAGGCGCTCGTCGAGGGACTTTTGAGAAGGGACGATTTGCACATGGAACAAGATTCGATGCTCGTCGACGTCGAAGATCTCACCAGATATCTCTTCTGCTGCGTTCACATGCACAGAGGTGCCAAGCAGGAGTCGTTGAAGAAGAAGCAGAACGCGAGGGAGCAGCAGTGCACGGGGAGCAGCAGAAGTCATCATCAGCAGGGCGGCAACCCGGGCCAGAACAAATCGTCGTCGATCAAGCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2458#0 --GCACGCGAGAATCGCGGCTCTGAACGAGGCGCTCGTCGAGGGACTTTTGAGAAGGGAC 58
consensus_2458#1 ACACCGGCTCGAATT-CGGCCCCGATCGACGAG---GCCGATTTCTTCGCAAGGCAGGCG 56
* ** **** **** * ** *** * * * *** * ** **
consensus_2458#0 GATTTGCACATGGAACAAGATTCGATGCTCGTCGACGTCGAAGATCTCACCAGATATCTA 118
consensus_2458#1 AGATTGCAAACCGAGGCACGAATGGCCTTGGCTCAGGCCAAAGAAATGGCCC-ACATGCA 115
***** * ** * * * * * * * **** * ** * ** *
consensus_2458#0 GGTGCCAAGCAGGAGTCGTTGAAGAAGAAGCAGAACGCGAGGGAGCAG-CAGTGC-ACGG 176
consensus_2458#1 GATG--GAAGTGGAGAGGCAAAGGCTGAAACAGAGCCCCATCACCGAGATGGTGCGATCC 173
* ** * **** * * * *** **** * * * ** **** *
consensus_2458#0 GGAGCAGCAGAAGTCATCATCAGCAGGGCGGCAACCCGGGCCAGAACAAATCGTCGTCGA 236
consensus_2458#1 AGCCTCGAAAAAGTTGGCGTT--CAACTCGGCGA---GGATAGGCGCAGATTGTCA-CGA 227
* * * **** * * ** **** * ** * ** ** *** ***
consensus_2458#0 TCAAGCCGAAGCTGACGCACCGTGGCCTGGTCTCGTTGGTGAGGAAATAATGCCTCGC-C 295
consensus_2458#1 GTACTTTTAACGGAGCTAAACGTCGCCCAGCTTCA--AGTGGTGGCG-AACGACTTGCAC 284
* ** * * *** *** * ** *** * ** * ** ** *
consensus_2458#0 ACGAGACTGCGCGGTCTCGTCGGAAATTAAGCGGGGAAGGCTTACCTTCCCGAGAGAGGA 355
consensus_2458#1 GCGAGAAT-CGCGGCTCTGAACGAGGC-GCTCGTCGAGGGACT--TTTGAGAAGGGACGA 340
***** * ***** * ** ** ** ** * ** ** ** **
consensus_2458#0 CGCGAGCAAGTATACGCAATTAACATCTGCTCGATTCGA-----TCTGCCGATCTCTCGC 410
consensus_2458#1 TTTGCACATGGAACAAGATTCGATGCTCGTCGACGTCGAAGATCTCACCAGATATCTCTT 400
* ** * * * * * * **** ** * *** ****
consensus_2458#0 CCCTCCCTCCCCGATCGAACAATTTCTCGAACTCGACTCCCGGTTCCGGTATGCTGGAAC 470
consensus_2458#1 CTGCTGCGTTCACATGCACAGAGGTGCCAAGCAGGAGTCGTTGAAGAAGAAGCAGAACGC 460
* * * ** * * * * * * ** ** * * * *
consensus_2458#0 GATCGCCCTTCCCTGCCCTCCCTCCTCCTCC--TCCCTCTCGAGAGGAAGGGAACGAGAA 528
consensus_2458#1 GAGGGAGCAGCAGTGCACGGGGAGCAGCAGAAGTCATCATCAGCAGGGCGGCAACCCGGG 520
** * * * *** * * * ** ** *** ** *** *
consensus_2458#0 ACGAGAGATTTATTCG--GACGAA---- 550
consensus_2458#1 CCAGAACAAATCGTCGTCGATCAAGCCG 548
* * * * *** ** **
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |