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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_271#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 452 fasta sequence
[GTCCGAGTCATCGACGGGCTCGAGTATACCAAAGTTAAATCTCTCCACCGCTCTGATGAGCCAGCCACCACCGAATTTCGGTGTCTCTCAAGTGTCTCCCGTCTCGATGTCCGCTTTGGTGTCAGCGGTCAGGTCACCAGCAGGTGGACAATTGCCACCTTCGGCCGGAGCACCTATGCCACCCATTCCTAACATGTCCAACATGTCAGGGATGCCTCCGTTGCCGAATATGCCTGGTAGCATGCCCACCATGCCTACCATGCCCAGCATGGCGGGGCCCATCAGACGACGTATCAGTGATAAATCCGCGCTTTCCTTGGCAGGAGGACTGTATGACGAGGGCACTGTAAGGCGCAGNGTAGCCGTCGATAGATCTGGAATAGATATTAACGAAGAAATTCAACGAAATAGGGAATTTTACAAGAACGCCGACGTCAGACCGCCGTTTACAT]
[+] EMBL BI512242 [GTCCGAGTCATCGACGGGCTCGAGTATACCAAAGTTAAATCTCTCCACCGCTCTGATGAGCCAGCCACCACCGAATTTCGGTGTCTCTCAAGTGTCTCCCGTCTCGATGTCCGCTTTGGTGTCAGCGGTCAGGTCACCAGCAGGTGGACAATTGCCACCTTCGGCCGGAGCACCTATGCCACCCATTCCTAACATGTCCAACATGTCAGGGATGCCTCCGTTGCCGAATATGCCTGGTAGCATGCCCACCATGCCTACCATGCCCAGCATGGCGGGGCCCATCAGACGACGTATCAGTGATAAATCCGCGCTTTCCTTGGCAGGAGGACTGTATGACGAGGGCACTGTAAGGCGCAGAGTAGCCGTCGATAGATCTGGAATAGATATTAACGAAGAAATTCAACGAAATAGGGAATTTTACAAGAACGCCGACGTCAGACCGCCGTTTACAT]
[+] EMBL BI512349 [GTCCGAGTCATCGACGGGCTCGAGTATACCAAAGTTAAATCTCTCCACCGCTCTGATGAGCCAGCCACCACCGAATTTCGGTGTCTCTCAAGTGTCTCCCGTCTCGATGTCCGCTTTGGTGTCAGCGGTCAGGTCACCAGCAGGTGGACAATTGCCACCTTCGGCCGGAGCACCTATGCCACCCATTCCTAACATGTCCAACATGTCAGGGATGCCTCCGTTGCCGAATATGCCTGGTAGCATGCCCACCATGCCTACCATGCCCAGCATGGCGGGGCCCATCAGACGACGTATCAGTGATAAATCCGCGCTTTCCTTGGCAGGAGGACTGTATGACGAGGGCACTGTAAGGCGCAGNGTAGCCGTCGATAGATCTGGAATAGATATTAACGAAGAAATTCAACGAAATAGGGAATTTTACAAGAACGCCGACGTCAGACCGCCGTTTAC ]
[+] EMBL BI516664 [GTCCGAGTCATCGACGGGCTCGAGTATACCAAAGTTAAATCTCTCCACCGCTCTGATGAGCCAGCCACCACCGAATTTCGGTGTCTCTCAAGTGTCTCCCGTCTCGATGTCCGCTTTGGTGTCAGCGGTCAGGTCACCATCAGGTGGACAATTGCCACCTTCGGCCGGAGCACCTATGCCACCCATTCCTAACATGTCCAACATGTCAGGGATGCCTCCGTTGCCGAATATGCCTGGTAGCATGCCCACCATGCCTACCATGCCCATCATGGCGGGGCCCATCAGACGACGTATCAGTGATAAATCCGCGCTTTCCTTGGCAGGAGGACTGTATGACG ]
consensusID : consensus_271#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 436 fasta sequence
[TCCAAAGAAAAAAAAAGTATAAGTAAGTTTTTTTTATCATATACGAGATACGAAGATATAATATCGTCCCGAGAAAGGTGAAACGAAAGACATGTGAATTTAGAAATTGAATACTATTCGTAGGACTGTATGACGAGGGCACTGTAAGGCGCAGAGTAGCCGTCGATAGATCTGGAATAGATATTAACGAAGGTAACGATTTAACAAAAATTCAGTCGGGGGTACGCACGATCTGTGAAATGCTGTTATTAATTTAACACGTATGATAATTTAACATGTACATAATTTCACTGTTAAGCGATAGTGAATTTATGCCTTAGACGATGNNNNAAAAAAAAAAAAAGGAAGAAGAAAAAAAGAATAATTTAAAAAGCATTTCCCGGCTCGTTCTCGTCGAATAAATCCCGACAAAAAGAAAATCCTGTAGCAAATGCTC]
[+] EMBL BI511538 [TCCAAAGAAAAAAAAAGTATAAGTAAGTTTTTTTTATCATATACGAGATACGAAGATATAATATCGTCCCGAGAAAGGTGAAACGAAAGACATGTGAATTTAGAAATTGAATACTATTCGTAGGACTGTATGACGAGGGCACTGTAAGGCGCAGAGTAGCCGTCGATAGATCTGGAATAGATATTAACGAAGGTAACGATTTAACAAAAATTCAGTCGGGGGTACGCACGATCTGTGAAATGCTGTTATTAATTTAACACGTATGATAATTTAACATGTACATAATTTCACTGTTAAGCGATAGTGAATTTATGCCTTAGACGATGCNNNAAAAAAAAAAAAAAGAAGAAGAAAAAAAGAATAATTTAAAAAGCATTTCCCGGCTCGTTCTCGTCGAATAAATCCCGACAAAAAGAAAATCCTGTAGCAAATGCTC]
[+] EMBL BI511480 [TCCAAAGAAAAAAAAAGTATAAGTAAGTTTTTTTTATCATATACGAGATACGAAGATATAATATCGTCCCGAGAAAGGTGAAACGAAAGACATGTGAATTTAGAAATTGAATACTATTCGTAGGACTGTATGACGAGGGCACTGTAAGGCGCAGAGTAGCCGTCGATAGATCTGGAATAGATATTAACGAAGGTAACGATTTAACAAAAATTCAGTCGGGGGTACGCACGATCTGTGAAATGCTGTTATTAATTTAACACGTATGATAATTTAACATGTACATAATTTCACTGTTAAGCGATAGTGAATTTATGCCTTAGACGATGNNNNAAAAAAAAAAAAAGGAAGAAGAAAAAAAGAATAATTTAAAAAGCATTTCCCGGCTCGTTCTCGTCGAATAAATCCCGACAAAAAGAAAATCCTGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_271#0 GTCCGAGTCATCGACGGGCTCGAGTATACCAAAGTTAA-ATCTCTCCACCGCTCTGATGA 59
consensus_271#1 -TCCAAAGAAAAAAAAAGTATAAGTAAGTTTTTTTTATCATATACGAGATACGAAGATAT 59
*** * * * * **** *** ** * * ***
consensus_271#0 GCCA--GCCACCACCGAATTTCGGTGTCTCTCAAGTGTCTCCCGTC-TCGATGTCCGCT- 115
consensus_271#1 AATATCGTCCCGAGAAAGGTGAAACGAAAGACATGTGAATTTAGAAATTGAATACTATTC 119
* * * * * * * * ** *** * * * ** * *
consensus_271#0 -TTGGTGTCAGCGGTCAGGTCACCAGCAGGTGGACAATTGCCACCTTCGGCCGGAGCACC 174
consensus_271#1 GTAGGACTGTATGACGAGGGCACTGTAAGGCGCAGAGTAGCCGTCGATAGATCTGGAATA 179
* ** * * *** *** *** * * * * *** * * * *
consensus_271#0 TATGCCACCCAT--TCCTAACATGTCCAACAT---GTCAGGGATGCCTCCGTTGCCGAAT 229
consensus_271#1 GATATTAACGAAGGTAACGATTTAACAAAAATTCAGTCGGGGGTACGCACGATCTGTGAA 239
** * * * * * * * ** ** *** *** * * ** * *
consensus_271#0 ATGCCTGGTAGCATGCCCACCATGCCTACCATGCCCAGCATGGCGGGGCCCATCAGACGA 289
consensus_271#1 ATGC-TGTTATTA-ATTTAACACGTATGATA-ATTTAACATGTACA---TAATTTCACTG 293
**** ** ** * * ** * * * * **** ** **
consensus_271#0 CGTATCAGTGATAAATCCGCGCTTTCCTTGGCAGGAGGACTGTATGACGAGGGCACTGTA 349
consensus_271#1 TTAAGCGATAGTGAATTTATGCCTTAGACGATGNNNNAAAAAAAAAAAAAGGAAGAAGAA 353
* * * * *** ** ** * * * * *** * *
consensus_271#0 AGGCGCAGNGTAGCCGTCGATAGATCTGGAATAGATATTAACGAAGAAATTCAACGAAAT 409
consensus_271#1 AAAAAGAATAATTTAAAAAGCATTTCCCGGCTCGTTCTCGTCGAATAAATCCCGACAAAA 413
* * * ** * * * * * **** **** * ***
consensus_271#0 AGGGAATTTTACAA-GAACGCCGACGTCAGACCGCCGTTTACAT 452
consensus_271#1 AGAAAATCCTGTAGCAAATGCTC--------------------- 436
** *** * * ** **
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |