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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 2763 cluster # 2763       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2763#0 length = 416 sequences # 1  
 consensus_2763#1 length = 133 sequences # 1  
consensusID : consensus_2763#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 416
fasta sequence 
                              [CGGACATTTGGTTCACGCACTCGGTCGAGCGGCCGGTGGTGCGAAGCTACCATCCGTGGGATTATGCCTGAACGCCTCTAAGGCCGTATCCTTTCTAGTCAAAGATGGCAACGATATCTCTAGGAGTCTCGTGTGGGTCGAAAGGCTCAAAACAATGTGACACTACTAGGTGGCCGGCCCTCGTGACCGGTCATCGCACGGGCCCCAGTTTGCCGTACGGGCGTCTTTGGATTCGTCGTCGGGATCTCGCCGATCGACGGCCACGGCGCTCTAACGGTCGATCATGGGTACTCCAACTTCGACGTCGAGACTCGGAATCGTCTGTAGACGACTTAGGTACCTGGCGGGGTGTTGTACTCGGTAGAGCAGTTACCACGCTGCGATCTGTTGAGACTCAGCCCTATGCTTGGGGATTC]

[+] EMBL BI517063             [CGGACATTTGGTTCACGCACTCGGTCGAGCGGCCGGTGGTGCGAAGCTACCATCCGTGGGATTATGCCTGAACGCCTCTAAGGCCGTATCCTTTCTAGTCAAAGATGGCAACGATATCTCTAGGAGTCTCGTGTGGGTCGAAAGGCTCAAAACAATGTGACACTACTAGGTGGCCGGCCCTCGTGACCGGTCATCGCACGGGCCCCAGTTTGCCGTACGGGCGTCTTTGGATTCGTCGTCGGGATCTCGCCGATCGACGGCCACGGCGCTCTAACGGTCGATCATGGGTACTCCAACTTCGACGTCGAGACTCGGAATCGTCTGTAGACGACTTAGGTACCTGGCGGGGTGTTGTACTCGGTAGAGCAGTTACCACGCTGCGATCTGTTGAGACTCAGCCCTATGCTTGGGGATTC]




>consensus_2763#0
CGGACATTTGGTTCACGCACTCGGTCGAGCGGCCGGTGGTGCGAAGCTACCATCCGTGGG
ATTATGCCTGAACGCCTCTAAGGCCGTATCCTTTCTAGTCAAAGATGGCAACGATATCTC
TAGGAGTCTCGTGTGGGTCGAAAGGCTCAAAACAATGTGACACTACTAGGTGGCCGGCCC
TCGTGACCGGTCATCGCACGGGCCCCAGTTTGCCGTACGGGCGTCTTTGGATTCGTCGTC
GGGATCTCGCCGATCGACGGCCACGGCGCTCTAACGGTCGATCATGGGTACTCCAACTTC
GACGTCGAGACTCGGAATCGTCTGTAGACGACTTAGGTACCTGGCGGGGTGTTGTACTCG
GTAGAGCAGTTACCACGCTGCGATCTGTTGAGACTCAGCCCTATGCTTGGGGATTC

consensusID : consensus_2763#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 133
fasta sequence 
                              [CGAGACTCCTAGAGATATCGTTGCCATCTTTGACGTAGAAAGGATACGGCTTAGTGGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACA]

[+] EMBL BG149168             [CGAGACTCCTAGAGATATCGTTGCCATCTTTGACGTAGAAAGGATACGGCTTAGTGGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACA]




>consensus_2763#1
CGAGACTCCTAGAGATATCGTTGCCATCTTTGACGTAGAAAGGATACGGCTTAGTGGGTA
CCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTC
ACAATTCCACACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2763#0      CGGACATTTGGTTCACGCACTCGGTCGAGCGGCCGGTGGTGCGAAGCTACCATCCGTGGG 60
consensus_2763#1      ------------------------------------------------------------
                                                                                  

consensus_2763#0      ATTATGCCTGAACGCCTCTAAGGCCGTATCCTTTCTAGTCAAAGATGGCAACGATATCTC 120
consensus_2763#1      ---------------------------------------------------CGAGACTCC 9
                                                                         *** *   *

consensus_2763#0      TAGGAGTCTCGTGTGGGTCGAAAGGCTCAAAACAATGTGACACTACTAGGTGGCCGGCCC 180
consensus_2763#1      TAGAGATATCGTTGCCATCTTTGACGTAGAAAGGATACGGC-TTAGTGGGTACCGAGCTC 68
                      ***   * ****     **       *  ***  **  * *  ** * ***  *  ** *

consensus_2763#0      TCGTGACCGGTCATCGCACGGGCCCCAGTTTGCCGTACGGGCGTCTTTGGATTCGTCGTC 240
consensus_2763#1      GAATTCGTAATCATGGTCATAGCT---GTTTCCTGTGTGAAATTGTT---ATCCGC--TC 120
                         *      **** *     **    **** * **  *    * **   ** **   **

consensus_2763#0      GGGATCTCGCCGATCGACGGCCACGGCGCTCTAACGGTCGATCATGGGTACTCCAACTTC 300
consensus_2763#1      ACAATTCCACACA----------------------------------------------- 133
                         **  * *  *                                               

consensus_2763#0      GACGTCGAGACTCGGAATCGTCTGTAGACGACTTAGGTACCTGGCGGGGTGTTGTACTCG 360
consensus_2763#1      ------------------------------------------------------------
                                                                                  

consensus_2763#0      GTAGAGCAGTTACCACGCTGCGATCTGTTGAGACTCAGCCCTATGCTTGGGGATTC 416
consensus_2763#1      --------------------------------------------------------


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)