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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 785 fasta sequence
[TAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCAGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTCCAGATGAAATGATAGATGTAATTGGTGTCACAAAAGGAAAAGGATATAAAGGTGTTACATCGCGTTGGCATACAAAAAAATTGCCACGCAAAACACATAAAGGTCTAAGAAAAGTCGCTTGTATTGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCTTAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAAGNCTTCATTTATGGGTCAACTTAAAAAAGATCGTATGCGTGAGGAACAACAAGCACAAGCTACTACCTCAGCACCATCGGCCGCAAATGCTTAATAAAAACATATACATATTAAAATATGTATAAAATGAAAAATAAAAAAT]
[+] EMBL BI503462 [TAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCAGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTCCAGATGAAATGATAGATGTAATTGGTGTCACAAAAGGAAAAGGATATAAAGGTGTTACATCGCGTTGGCATACAAAAAAATTGCCACGCAAAACACATAAAGGTCTAAGAAAAGTCGCTTGTATTGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAA ]
[+] EMBL BI514151 [ TGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCTTAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAAGNCTTCATTTAT ]
[+] EMBL BI510985 [ GTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCTTAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAAGACTTCATTTATGGGTCAACTTAAAAAAGATCGTATGCGTGAGGAACAACAAGCACAAGCTACTACCTCAGCACCATCGGCCGCAAATGCTTAATAAAAACATATACATATTAAAATATGTATAAAATGAAAAATAAAAAAT]
consensusID : consensus_336#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 549 fasta sequence
[AAGCTTTTCCTAAAGATGATCCAAGCAAACCTGTACATTTAACGGCTTTTATCGGTTATAAAGCCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAGAAATTGTAGAAGCAGTTACCATTTTAGAAACACCACCTATGATTGTAGTTGGTGTAGTTGGTTATATTGAAACTCCGCATGGTTTACGTGCTCTTACTACAGTATGGGCAGAACATTTATCTGAAGATTGTCGAAGAAGATTTTATAAAAACTGGTACAAAAGCAAAAAGAAGGCATTTACAAAAGCTTCCAAAAAATGGCAAGATGATCTTGGTCGTAAATCTATAGAAAACGATTTTAAAAAAATCATTAAATATTGTAAAGTTGTACGAATTATCGCTCATACGCAGATGAAATTATTAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCTGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTC]
[+] EMBL BI505312 [AAGCTTTTCCTAAAGATGATCCAAGCAAACCTGTACATTTAACGGCTTTTATCGGTTATAAAGCCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAGAAATTGTAGAAGCAGTTACCATTTTAGAAACACCACCTATGATTGTAGTTGGTGTAGTTGGTTATATTGAAACTCCGCATGGTTTACGTGCTCTTACTACAGTATGGGCAGAACATTTATCTGAAGA ]
[+] EMBL BI510465 [ GCAAACCTGTACATTTAACGGCTTTTATCGGTTATAAAGCCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAGAAATTGTAGAAGCAGTTACCATTTTAGAAACACCACCTATGATTGTAGTTGGTGTAGTTGGTTATATTGAAACTCCGCATGGTTTACGTGCTCTTACTACAGTATGGGCAGAACATTTATCTGAAGATTGTCGAAGAAGATTTTATAAAAACTGGTACAAAAGCAAAAAGAAGGCATTTACAAAAGCTTCCAAAAAATGGCAAGATGATCTTGGTCGTAAATCTATAGAAAACGATTTTAAAAAAATCATTAAATATTGTAAAGTTGTACGAATTATCGCTCATACGCAGATGAAATTATTAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCTGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_336#0 TAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTG 60
consensus_336#1 ---------------------------------------------------AAGCTTTTC 9
* ** **
consensus_336#0 AGCAGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTT 120
consensus_336#1 CTAAAGATGATCCAAGCAAACCTGTACATTTAA------CGGCTTTTATCGGTTATAAAG 63
* * * ** * * * ** ******* * * * ** ** **
consensus_336#0 TTGCTCCAGATGAAATGATAGATGTAATTGGTGTCACAAAAGGAAAAGGATATAAAGGTG 180
consensus_336#1 CCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAG 123
* * * * * * * * ** * ** * *** * **** *
consensus_336#0 TTACATCGCGTTGGCATACAAAAAAATTGCCACGCAAAACACATAAAGGTC-TAAGAAAA 239
consensus_336#1 --AAATTGTAGAAGCAGTTACCA--TTTTAGAAACACCACCTATGATTGTAGTTGGTGTA 179
* ** * *** * * ** * ** ** ** * ** * * *
consensus_336#0 GTCGCTTGTATTGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGT 299
consensus_336#1 GTTGGTTATATTGAAACTCCGCATGGTTTACGTG---CTCTTACTACAGTATGGGCAGAA 236
** * ** ***** * ** **** * **** ** ***** * * * ** *
consensus_336#0 CAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACA--AG 357
consensus_336#1 CATTTATCTGAAGATTGTCGAAGAAGATTTTATAAAAACTGGTACAAAAGCAAAAAGAAG 296
** * ** *** * * * * ******* ** * ** * * **
consensus_336#0 GAATTCATA--------CTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATA 409
consensus_336#1 GCATTTACAAAAGCTTCCAAAAAATGGCAAGATGATCTTGG-TCGTAAATCTATAGAAAA 355
* *** * * * *** ********** * * * * **** **** *
consensus_336#0 CGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAA 469
consensus_336#1 CGATTTTA---AAAAAATCATTAAATAT-TGTAAAGTTGTACGAATTATCGCTCATACGC 411
**** *** * **** ** * * ** * *** * * ***** * *
consensus_336#0 TAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAA--AACGTGTAATTACA 527
consensus_336#1 AGATGAAATTATTAAGAC--AACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAA 469
**** * **** ** ** ** * * * * ** * * ***** *
consensus_336#0 TTACGTAAGTCCTTATT----AGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCT 583
consensus_336#1 TGGTGGAACTATTGAGCTGAAAGTTCA-ATGGGCTCGTGAACATTTAGAAAAACCAGT-- 526
* * ** * * * ****** * * * **** ** * ** *
consensus_336#0 TAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAA 643
consensus_336#1 ---ACCTGTCAGTA-ATGTTTTTGCTC--------------------------------- 549
* * ** ** * *** *
consensus_336#0 GNCTTCATTTATGGGTCAACTTAAAAAAGATCGTATGCGTGAGGAACAACAAGCACAAGC 703
consensus_336#1 ------------------------------------------------------------
consensus_336#0 TACTACCTCAGCACCATCGGCCGCAAATGCTTAATAAAAACATATACATATTAAAATATG 763
consensus_336#1 ------------------------------------------------------------
consensus_336#0 TATAAAATGAAAAATAAAAAAT 785
consensus_336#1 ----------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |