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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_390#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 532 fasta sequence
[TACAATTGTTACAATATCGTTTTTTTCATTGTGGAAATAACGAATTTTCAACATGGTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAATGACAGGCTTAACATTAGAGGAAGCGCGTCGTGTAGCAATTGAAAGGGGTTGGAACGTAGATGGAACGATGGTGCAACCTTGTAAGATTCAGAAAGAA]
[+] EMBL BI510744 [TACAATTGTTACAATATCGTTTTTTTCATTGTGGAAATAACGAATTTTCAACATGGTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGTAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT ]
[+] EMBL BI514680 [ GTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT ]
[+] EMBL BI511090 [ AGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAATGACAGGCTTAACATTAGAGGAAGCGCGTCGTGTAGCAATTGAAAGGGGTTGGAACGTAGATGGAACGATGGTGCAACCTTGTAAGATTCAGAAAGAA]
consensusID : consensus_390#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence
[GTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTACCTGAACGAGAGAGGTTTCGATCTGTCTTTGTTTGATCGAAAAATCGCCGTCGCAGATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT]
[+] EMBL BI516128 [GTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTACCTGAACGAGAGAGGTTTCGATCTGTCTTTGTTTGATCGAAAAATCGCCGTCGCAGATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_390#0 TACAATTGTTACAATATCGTTTTTTTCATTGTGGAAATAACGAATTTTCAACATGGTGCT 60
consensus_390#1 -------------------------------------------------------GTGCT 5
*****
consensus_390#0 AAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGG 120
consensus_390#1 AAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGG 65
************************************************************
consensus_390#0 AGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCT 180
consensus_390#1 AGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCT 125
************************************************************
consensus_390#0 A---------------------------------------------------------TG 183
consensus_390#1 ACCTGAACGAGAGAGGTTTCGATCTGTCTTTGTTTGATCGAAAAATCGCCGTCGCAGATG 185
* **
consensus_390#0 CAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACT 243
consensus_390#1 CAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACT 245
************************************************************
consensus_390#0 TGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGT 303
consensus_390#1 TGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGT 305
************************************************************
consensus_390#0 CGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAA 363
consensus_390#1 CGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAA 365
************************************************************
consensus_390#0 TGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGT 423
consensus_390#1 TGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGT 425
************************************************************
consensus_390#0 ATTTGCGTCAATGACAGGCTTAACATTAGAGGAAGCGCGTCGTGTAGCAATTGAAAGGGG 483
consensus_390#1 ATTTGCGTCAAT------------------------------------------------ 437
************
consensus_390#0 TTGGAACGTAGATGGAACGATGGTGCAACCTTGTAAGATTCAGAAAGAA 532
consensus_390#1 -------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |