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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_414#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 972 fasta sequence
[AAAATTAAAATAACGTGAATGATGGATCATCAAATATTTAAAATATACAATCAAGAAGATTTTAATAGAATTACAAAAGGAATTAAAGTAGCACAATGCATGCAATCACGATCGTCATCTGTTTCAGAAAATGAGAAATTGTTGAATCAACTTGATGATTTAGTTGTATCCGATTCTTTAAGTTGTTCATTTTGTAATACTATATTTGAAGATAAAGCACAACAAAGACTTCATTATAAATTAGATTGGCATCCGATATAATTTAAAACAGCGTTTAAATGGATCAAAACCTATAAATGAAGATAAATTTAGCCTTCTTGCTGATGAAGGTAACGTTTCAAGTTTATCTGGTAGTGATGTAGATTCTGAAAATGAAGATGAGACATATGTTTCGGAAGCTGGAATTTTACCTAGTGGACATTGTGAAAATAGAAATCTTATTAATAAGAATAAAAAAATTGAGAAAAAAGGAAAAAATATGGAATCAATTTCTGATAGTTCTGATACAGAATGTTGTGATGATATTATAAAAGAGAAAAAAACTGAAGATTTATTAGTCACTGCAAGTCGCTCATTCAAAAGTTTTTTTTTGAAAATGGATGATGGAAATATATTTAGTATATACAGGTGTTTACTTCATAATAAAAAGGTCTGTTCATTTATAGTAATAGAGATATAGTTTTGTAAGTAACTTTCTCTGAGTATAGACATACTTGTCTATGGATTTTATCTTGTAATTTAATCTACTTTATTAGAATCACTTGGCGTGTCTATACTTGCCAGATCAGGAGAGATGCAATTACATTTTAGGAAATTCCAGAAGTAGACAATGAGATGATTGCTCAGGCATTGGACAGTGGGAGGAAAACAACATGGACTGTTATCATGATTGGTGGAGGACATTTTGCTGCAGCTGTATTTCAAGACGGAGAACCCGTTGTACATAAAACATTTCATTCCTATACTGTACGA]
[+] EMBL BI946465 [AAAATTAAAATAACGTGAATGATGGATCATCAAATATTTAAAATATACAATCAAGAAGATTTTAATAGAATTACAAAAGGAATTAAAGTAGCACAATGCATGCAATCACGATCGTCATCTGTTTCAGAAAATGAGAAATTGTTGAATCAACTTGATGATTTAGTTGTATCCGATTCTTTAAGTTGTTCATTTTGTAATACTATATTTGAAGATAAAGCACAACAAAGACTTCATTATAAATTAGATTGGCATCCGATATAATTTAAAACAGCGTTTAAATGGATTAAAACCTATAAATGAAGATAAATTTAGCCTTCTTGCTGATGAAGGTAACGTTTCAAGTTTATCTGGTAGTGATGTAGATTCTG AAATGAACATGAGACATATGTT ]
[+] EMBL BQ103807 [ TTTTAATACTATATTTGAAGATAAAGCACAACAAAGACTTCATTATAAATTAGATTGGCAT CGATATAATTTAAAACAGCGTTTAAATGGATCAAAACCTATAAATGAAGATAAATTTAGCCTTCTTGCTGATGAAGGTAACGTTTCAAGTTTATCTGGTAGTGATGTAGATTCTGAAAATGAAGATGAGACATATGTTTCGGAAGCTGGAATTTTACCTAGTGGACATTGTGAAAATAGAAATCTTATTAATAAGAATAAAAAAATTGAGAAAAAAGGAAAAAATATGGAATCAATTTCTGATAGTTCTGATACAGAATGTTGTGATGATATTATAAAAGAGAAAAAAACTGAAGATTTATTAGTCACTGCAAGTCGCTCATTCAAAAGTTTTTTTTTGAAAATGGATGATGGAAATATATTTAGTATATACAGGTGTTTACTTCATAATAAAAAGGTCTGTTCATTTATAGTAATAGAGATATAGTTTTGTAAGTAACTTTCTCTGAGTATAGACATACTTGTCTATGGATTTTATCTTGTAATTTAATCTACTTTATTAGAATCACTTGGCGTGTCTATACTTGCCAGATCAGGAGAGATGCAATTACATTTTAGGAAATTCCAGAAGTAGACAATGAGATGATTGCTCAGGCATTGGACAGTGGGAGGAAAACAACATGGACTGTTATCATGATTGGTGGAGGACATTTTGCTGCAGCTGTATTTCAAGACGGAGAACCCGTTGTACATAAAACATTTCATTCCTATACTGTACGA]
consensusID : consensus_414#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence
[AAAAGCGAGTAAATTTTCATGAAATTCTACTTCTAATTCTTGTTGAATTAATGAAACATCCATTGGAGCATTAGGAGTATTTATTTGATTATCCAATTCTTCAACTTTATCCAATTCTGATTCTGAAGATGATTGTGCTAACTTAGCAACTATATCAGGTAAAGGACGGCATGGACTTTTTCTTGGTTTTGCTCTATCTATATAAGATCGAGAATTTCTATGTTGTCTTTCGGGAGATGGTTGAGCAGGAACTTTATTCTTGTCATTATCTTGGGTATTACGGATATTACTGGAAGCATTAGAATCATTTTCTTCATTTTCTGTTTTTATTGGAATTTCCCCAGAAACATCAGTTTTTGATAATTTTTTTCTAAGNGGTTGACGAGGTGAAATAGGAAAAGAATCTGTAAAATCAGCTGCAGAACCATAAATTTCCATTGTACTTAATATATCATACACTCTTTTAACTTCACTGAATGTTGCTCTACGAGTAGGAAAAGGCAATGGTCTTAATCTTAAGTCATTCTTATCTAAAGGCGGATTTTTTCCTCCGAATAATACAG]
[+] EMBL BI515548 [AAAAGCGAGTAAATTTTCATGAAATTCTACTTCTAATTCTTGTTGAATTAATGAAACATCCATTGGAGCATTAGGAGTATTTATTTGATTATCCAATTCTTCAACTTTATCCAATTCTGATTCTGAAGATGATTGTGCTAACTTAGCAACTATATCAGGTAAAGGACGGCATGGACTTTTTCTTGGTTTTGCTCTATCTATATAAGATCGAGAATTTCTATGTTGTCTTTCGGGAGATGGTTGAGCAGGAACTTTATTCTTGTCATTATCTTGGGTATTACGGATATTACTGGAAGCATTAGAATCATTTTCTTCATTTTCTGTTTTTATTGGAATTTCCCCAGAAACATCAGTTTTTGATAATTTTTTTCTAAGNGGTTGACGAGGTGAAATAGGAAAAGAATCTGTAAAATCAGCTGCAGAACCATAAATTTCCATTGTACTTAATATATCATACACTCTTTTAACTTCACTGAATGTTGCTCTACGAGTAGGAAAAGGCAATGGTCTTAATCTTAAGTCATTCTTATCTAAAGGCGGATTTTTTCCTCCGAATAATACAG]
consensusID : consensus_414#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence
[GATGATGGAAATATATTTAGTATATACAGGTGTTTACTTCATAATAAAAAGGAAATTCCAGAAGTAGACAATGAGATGATTGCTCAGGCATTGGACAGTGGGAGGAAAACAACATGGACTGTTATCATGATTGGTGGAGGACATTTTGCTGCAGCTGTATTTCAAGACGGAGAACCCATTGTACATAAAACATTTCATTCCTATACTGTACGAGCAAAACAAGGCTTTGCCCAAAGTTCACGTACAACAGCTAATCATGCAAAAAGTGCTGGAGCTAGTTTACGTCGTTATAATGAAGCATCTCTTCTTCAGCATGTACAAGATATACTTGAATCGTGGTCATCTTATATTAATAATTCCTCTCTAATTTTATATAGAGCTGTTGGTCCATATAATCGAACTGTATTATTCGGAGGAAAAAATCCGCCTTTAGATAAGAA]
[+] EMBL BI514565 [GATGATGGAAATATATTTAGTATATACAGGTGTTTACTTCATAATAAAAAGGAAATTCCAGAAGTAGACAATGAGATGATTGCTCAGGCATTGGACAGTGGGAGGAAAACAACATGGACTGTTATCATGATTGGTGGAGGACATTTTGCTGCAGCTGTATTTCAAGACGGAGAACCCATTGTACATAAAACATTTCATTCCTATACTGTACGAGCAAAACAAGGCTTTGCCCAAAGTTCACGTACAACAGCTAATCATGCAAAAAGTGCTGGAGCTAGTTTACGTCGTTATAATGAAGCATCTCTTCTTCAGCATGTACAAGATATACTTGAATCGTGGTCATCTTATATTAATAATTCCTCTCTAATTTTATATAGAGCTGTTGGTCCATATAATCGAACTGTATTATTCGGAGGAAAAAATCCGCCTTTAGATAAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_414#0 AAAATTAAAATAACGTGAATGATGGATCATCAAATATTTAAAATATACAATCAAGAAGAT 60
consensus_414#2 -----------------GATGATGGA----AATATATTTAGTATATACAGGTGTTTACTT 39
consensus_414#1 ----------------------------------------------AAAAGCGAGTAAAT 14
* * * *
consensus_414#0 TTTAATAGAATTACAAAAGGAATTAAAGTAGCACAATGCATGCAATCACGATCGTCATCT 120
consensus_414#2 CATAATAAA------AAGGAAATTCCAGAAGTAGACAATGAG-----ATGATTG-CTCAG 87
consensus_414#1 TTTCATGAAATTCTACTTCTAATTCTTGTTGAATTAATGAAAC-------ATCCATTGGA 67
* ** * **** * * * **
consensus_414#0 GTTTCAGAAAATGAGAAATTGTTGAATCAACTTGATGATTTAGTTG-TATCCGATTCTTT 179
consensus_414#2 GCATTGGACAGTGGGAGGAAAACAACATGGACTGTTATCATGATTGGTGGAGGACATTTT 147
consensus_414#1 GCATTAGG-AGTATTTATTTGATTATCCAATTCTTCAACTTTATCCAATTCTGATTCTGA 126
* * * * * * * * ** *
consensus_414#0 AAGTTGTTCATTTTGTAATACTATATTTGAAGATAAAGCACAACAAAGACTTCATTA-TA 238
consensus_414#2 GCTGCAGCTGTATTTCAAGACGGA----GAACCCATTGTACATAAAACATTTCATTCCTA 203
consensus_414#1 AGATGATTGTGCTAACTTAGCAACTATATCAGGTAAAGGACGGCATGGACTTTTTCTTGG 186
* * * * * ** * * ** *
consensus_414#0 AATTAGATTGGCATCCGATATAATTTAAAACAGCGTTTAAATGGATCA---AAACCTATA 295
consensus_414#2 TACTGTACGAGCAA--AACAAGGCTTTGCCCAAAGTTCACGTACAACAGCTAATCATGCA 261
consensus_414#1 TTTTGCTCTATCT----ATATAAGATCG---AGAATTTCTATGTTGTCTTTCGGGAGATG 239
* * * * * * ** *
consensus_414#0 AATGAAGATAAATTTAGCCTTCTTGCTGATGAAGGTAACGTTTCAAGTTTATCTGGTAGT 355
consensus_414#2 AAAAGTGCTGGAGCTAGTTTACGTCGTTAT-AATGAAGCATCTCTTCTTCAGCATGTA-C 319
consensus_414#1 GTTGAGCAGGAACTTTATTCTTGTCATTATCTTGG--GTATTACGGATATTACTGGAAGC 297
* * * * ** * * * * * * *
consensus_414#0 GATGTAG--ATTCTGAAAATGAAGATGAGACAT--ATGTTTCGGAAGCTGGAATTTTACC 411
consensus_414#2 AAGATAT--ACTTGAATCGTGGTCATCTTATATTAATAATTCC---TCTCTAATTTTATA 374
consensus_414#1 ATTAGAATCATTTTCTTCATTTTCTGTTTTTATTGGAATTTCCCCAGAAACATCAGTTTT 357
* * * * ** *** * *
consensus_414#0 TAGTGGACATTGTGAAAATAG--AAATCTTATTAATAAGAATAAAAAAATTGAGAAAAAA 469
consensus_414#2 TAGAGCTGTTGGTCCATATAATCGAACTGTATTATTCGGAGGAAAAAATCCGCCTTTAGA 434
consensus_414#1 TGATAATTTTTTTCTAAGNGGTTGACGAGGTGAAATAGGAAAAGAATCTGTAAAATCAGC 417
* * * * * * * ** * ** *
consensus_414#0 GGAAAAAATATGGAATCAATTTCTGATAGTTCTGATACAGAATGTTGTGATGATATTATA 529
consensus_414#2 TAAGAA------------------------------------------------------ 440
consensus_414#1 TGCAGAACCATAAATTTCCATTGTACTTAATATATCATACACTCTTTTAACTTCACTGAA 477
*
consensus_414#0 AAAGAGAAAAAAACT--GAAGATTTATTAGTC---ACTGCAAGTCGCTC--ATTCAAAAG 582
consensus_414#2 ------------------------------------------------------------
consensus_414#1 TGTTGCTCTACGAGTAGGAAAAGGCAATGGTCTTAATCTTAAGTCATTCTTATCTAAAGG 537
consensus_414#0 TTTTTTTTTGAAAATGGATGATGGAAATATATTTAGTATATACAGGTGTTTACTTCATAA 642
consensus_414#2 ------------------------------------------------------------
consensus_414#1 CGGATTTTTTCCTCCGAATAATACAG---------------------------------- 563
consensus_414#0 TAAAAAGGTCTGTTCATTTATAGTAATAGAGATATAGTTTTGTAAGTAACTTTCTCTGAG 702
consensus_414#2 ------------------------------------------------------------
consensus_414#1 ------------------------------------------------------------
consensus_414#0 TATAGACATACTTGTCTATGGATTTTATCTTGTAATTTAATCTACTTTATTAGAATCACT 762
consensus_414#2 ------------------------------------------------------------
consensus_414#1 ------------------------------------------------------------
consensus_414#0 TGGCGTGTCTATACTTGCCAGATCAGGAGAGATGCAATTACATTTTAGGAAATTCCAGAA 822
consensus_414#2 ------------------------------------------------------------
consensus_414#1 ------------------------------------------------------------
consensus_414#0 GTAGACAATGAGATGATTGCTCAGGCATTGGACAGTGGGAGGAAAACAACATGGACTGTT 882
consensus_414#2 ------------------------------------------------------------
consensus_414#1 ------------------------------------------------------------
consensus_414#0 ATCATGATTGGTGGAGGACATTTTGCTGCAGCTGTATTTCAAGACGGAGAACCCGTTGTA 942
consensus_414#2 ------------------------------------------------------------
consensus_414#1 ------------------------------------------------------------
consensus_414#0 CATAAAACATTTCATTCCTATACTGTACGA 972
consensus_414#2 ------------------------------
consensus_414#1 ------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |