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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_460#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence
[ATGAACAAATTATTCTTGATAGAACTACATCTGGGAATCACATCATAGTAGCTCATCACAATCTGTTTTATAGCGTTCCTGTTAGAGCTCCTGATCGAGGCCGTATAACCGAAACCGAATTGGCCCAACAAATTTTAAAAATTATGGAAACTAAAGCTGATCCTCGAACTCCACCAGTTGGTATCCTTACAACGATGAAGAGACCAGCTTGGGCAAAGGCAAGGGAAGAATTACTTAAACGTACGTATTATTTTTAATTATAACTCTACTATTAATATAATTAATTAATTCAACAATAATGTTGATAAAATAATTACAATATCACAAATAAATGAAGCAAATAAAAATCTTTAAATAAAACAAGTTTATAAATTTTATTAAATATATTTATTATTTAAGTAATTTTAATTATTCATTTCCTCTCATTATTAAAAGAAGAATACATTTACGTTTATTTGCTCTTAATATTATGAACTAAATGAACACGTAAGTGAAAATGTGACTCATAGCATTTACAACCAGTTAAAGTAATCTCATTGCAAGTTTTCCAGCAACCCTTCCACCACGTACCCTTCTAGGCCATAATTAACGGCTGTTCTACTCTCGCCAATATTCGCAATATTCCCATTAGCCCCCTAACCCGATCTTACCCAACGA]
[+] EMBL BI510088 [ATGAACAAATTATTCTTGATAGAACTACATCTGGGAATCACATCATAGTAGCTCATCACAATCTGTTTTATAGCGTTCCTGTTAGAGCTCCTGATCGAGGCCGTATAACCGAAACCGAATTGGCCCAACAAATTTTAAAAATTATGGAAACTAAAGCTGATCCTCGAACTCCACCAGTTGGTATCCTTACAACGATGAAGAGACCAGCTTGGGCAAAGGCAAGGGAAGAATTACTTAAACGTACGTATTATTTTTAATTATAACTCTACTATTAATATAATTAATTAATTCAACAATAATGTTGATAAAATAATTACAATATCACAAATAAATGAAGCAAATAAAAATCTTTAAATAAAACAAGTTTATAAATTTTATTAAATATATTTATTATTTAAGTAATTTTAATTATTCATTTCCTCTCATTATTAAAAGAAGAATACATTTACGTTTATTTGCTCTTAATATTATGAACTAAATGAACACGTAAGTGAAAATGTGACTCATAGCATTTACAACCAGTTAAAGTAATCTCATTGCAAGTTTTCCAGCAACCCTTCCACCACGTACCCTTCTAGGCCATAATTAACGGCTGTTCTACTCTCGCCAATATTCGCAATATTCCCATTAGCCCCCTAACCCGATCTTACCCAACGA]
consensusID : consensus_460#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 623 fasta sequence
[TAGTAGCTCATCACAATCTGTTTTATAGCGTTCCTGTTAGAGCTCCTGATCGAGGCCGTATAACCGAAACCGAATTGGCCCAACAAATTTTAAAAATTATGGAAACTAAAGCTGATCCTCGAACTCCACCAGTTGGTATCCTTACAACGATGAAGAGACCAGCTTGGGCAAAGGCAAGGGAAGAATTACTTAAACACGAACAAAATCGGCACAATTTGGAATTGTTGGAAAGATGTCTGTGCGTGGTGTGTATCGACGATGATATATTACCAGCGACGTTCAACAATCCTCTGAAGAAAGAGGATCGATGGATCGATAATCGAGATTACGCGAACGTACTTCATCACGTTCTTCATGGCGGAGGTTCCAGACATTTGGGCGCGAATCGATGGTTCGATAAAACATTCCACGCCATTCTCGGCAAGGACGGAATGTGGGGCATGAATTACGAACATTCGGCTGGCGAAGGTCCAGCGATTTTTATCACATTCGAGGAATTAACAGAGAAAGTCGATGCCATGTCACCACCCGAGGAAAACACCGTTCCATCGCATTTGCCTGCACCTGAAAAGCTCGAGTGGCATCTATCCGAACAAAGTTTTAGCGATATCAGAGATGCAATG]
[+] EMBL BI506797 [TAGTAGCTCATCACAATCTGTTTTATAGCGTTCCTGTTAGAGCTCCTGATCGAGGCCGTATAACCGAAACCGAATTGGCCCAACAAATTTTAAAAATTATGGAAACTAAAGCTGATCCTCGAACTCCACCAGTTGGTATCCTTACAACGATGAAGAGACCAGCTTGGGCAAAGGCAAGGGAAGAATTACTTAAACACGAACAAAATCGGCACAATTTGGAATTGTTGGAAAGATGTCTGTGCGTGGTGTGTATCGACGATGATATATTACCAGCGACGTTCAACAATCCTCTGAAGAAAGAGGATCGATGGATCGATAATCGAGATTACGCGAACGTACTTCATCACGTTCTTCATGGCGGAGGTTCCAGACATTTGGGCGCGAATCGATGGTTCGATAAAACATTCCACGCCATTCTCGGCAAGGACGGAATGTGGGGCATGAATTACGAACATTCGGCTGGCGAAGGTCCAGCGATTTTTATCACATTCGAGGAATTAACAGAGAAAGTCGATGCCATGTCACCACCCGAGGAAAACACCGTTCCATCGCATTTGCCTGCACCTGAAAAGCTCGAGTGGCATCTATCCGAACAAAGTTTTAGCGATATCAGAGATGCAATG]
consensusID : consensus_460#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 546 fasta sequence
[TTTTTTTTTTTTTTTATTGCCTTCTTTTATAGTTATGAATATTTTTCTTTCAAAGCTAATTCATCCTTTAATTGTCCGTTTATCTTTGATTCGCCTTGTTCAACATATCTGCCATATCCCTCAAGCTTTGTTCGAGCGTTTGAGCGAATCGTGTCGCGTTTGTTTTACCATCACTATGAAAAGCGGACACCGAAAATATGAAACCATTGCTTCTGAGATTATAAGCGCAACCATAACCATCTGGAACAACTGGCCCGTACCCGATGATGGCATCATTTTTCGAAGTTACCTGTGATGTCGAGAGAGCAAAGTGATTCACTATCTTGTAAGCTTGATCCGTGAAAATATCCGGAACCGGTTCTCCAACTTCCTGCGCGGCATAACGAAGGCCCATTAAATGGTTGTCAATTCCATAACCATTTATGTTATCGTTCATTTCCTTAGTTTGTCTCTGTACTGCTAGGTCGAATAATTCCTTGATTCTTTCTTGGCATCAAAAGATATCATTGCATCTCTGATATCGCTAAAACTTTGTTCGGATAGATG]
[+] EMBL BI509038 [TTTTTTTTTTTTTTTATTGCCTTCTTTTATAGTTATGAATATTTTTCTTTCAAAGCTAATTCATCCTTTAATTGTCCGTTTATCTTTGATTCGCCTTGTTCAACATATCTGCCATATCCCTCAAGCTTTGTTCGAGCGTTTGAGCGAATCGTGTCGCGTTTGTTTTACCATCACTATGAAAAGCGGACACCGAAAATATGAAACCATTGCTTCTGAGATTATAAGCGCAACCATAACCATCTGGAACAACTGGCCCGTACCCGATGATGGCATCATTTTTCGAAGTTACCTGTGATGTCGAGAGAGCAAAGTGATTCACTATCTTGTAAGCTTGATCCGTGAAAATATCCGGAACCGGTTCTCCAACTTCCTGCGCGGCATAACGAAGGCCCATTAAATGGTTGTCAATTCCATAACCATTTATGTTATCGTTCATTTCCTTAGTTTGTCTCTGTACTGCTAGGTCGAATAATTCCTTGATTCTTTCTTGGCATCAAAAGATATCATTGCATCTCTGATATCGCTAAAACTTTGTTCGGATAGATG]
consensusID : consensus_460#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 543 fasta sequence
[CAACTTACGAAAGCGCGGGTATTCGAAGATTCGCACTAGGAAGGGTTGATTGTATCAGAGCGGCCAGTCCCGAGGCTCTAAACTGGGCGAAAGCAATGTGCCAAGGGGATCCTGATAGTCAAACCGCCACTCAACAGAGCACTCAAGACGAAGGCACCAAAAGACAAGAAAGAATCAAGGAATTATTCGACCTAGCAGTACAGAGACAAACTAAGGAAATGAACGATAACATAAATGGTTATGGAATTGACAACCATTTAATGGGCCTTCGTTATGCCGCGCAGGAAGTTGGAGAACCGGTTCCGGATATTTTCACGGATCAAGCTTACAAGATAGTGAATCACTTTGCTCTCTCGACATCACAGGTAACTTCGAAAAATGATGCCATCATCGGGTACGGGCCAGTTGTTCCAGATGGTTATGGTTGCGCTTATAATCTCAGAAGCAATGGTTTCATATTTTCGGTGTCCGCTTTTCATAGTGATGGTAAAACAAACGCGACACGATTCGCTCAAACGCTCGAACAAAGCTTGAGGGATATGG]
[+] EMBL BI506762 [CAACTTACGAAAGCGCGGGTATTCGAAGATTCGCACTAGGAAGGGTTGATTGTATCAGAGCGGCCAGTCCCGAGGCTCTAAACTGGGCGAAAGCAATGTGCCAAGGGGATCCTGATAGTCAAACCGCCACTCAACAGAGCACTCAAGACGAAGGCACCAAAAGACAAGAAAGAATCAAGGAATTATTCGACCTAGCAGTACAGAGACAAACTAAGGAAATGAACGATAACATAAATGGTTATGGAATTGACAACCATTTAATGGGCCTTCGTTATGCCGCGCAGGAAGTTGGAGAACCGGTTCCGGATATTTTCACGGATCAAGCTTACAAGATAGTGAATCACTTTGCTCTCTCGACATCACAGGTAACTTCGAAAAATGATGCCATCATCGGGTACGGGCCAGTTGTTCCAGATGGTTATGGTTGCGCTTATAATCTCAGAAGCAATGGTTTCATATTTTCGGTGTCCGCTTTTCATAGTGATGGTAAAACAAACGCGACACGATTCGCTCAAACGCTCGAACAAAGCTTGAGGGATATGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_460#0 ATGAACAAATTATTCTTGATAGAACTACATCTGGGAATCACATCATAGTAGCTCATCACA 60
consensus_460#1 ---------------------------------------------TAGTAGCTCATCACA 15
consensus_460#2 ------------------------------------------------------------
consensus_460#3 ------------------------------------------------------------
consensus_460#0 ATCTGTTTTATAGCGTTCCTGTTAGAGCTCCTGATCGAGGCCGTATAACCGAAACCGAAT 120
consensus_460#1 ATCTGTTTTATAGCGTTCCTGTTAGAGCTCCTGATCGAGGCCGTATAACCGAAACCGAAT 75
consensus_460#2 ------------------TTTTTTTTTTTTTTTATTGCCTTCTTTTATAGTTATGAATAT 42
consensus_460#3 ---------------------------------------------CAACTTACGAAAGCG 15
*
consensus_460#0 TGGCCCAACAAATTTTAAAAATTATGGAAACTAAAGCTGATCCTCGAACTCCACCAGTTG 180
consensus_460#1 TGGCCCAACAAATTTTAAAAATTATGGAAACTAAAGCTGATCCTCGAACTCCACCAGTTG 135
consensus_460#2 TTTTCTTTCAAAGCTAATTCATCCTTTAATTGTCCGTTTATCTTTGATTCGCCTTGTTCA 102
consensus_460#3 CGGGTATTCGAAG---ATTCGCACTAGGAAGGGTTGATTGTATCAGAGCGGC-CAGTCCC 71
* ** * * * * * * ** *
consensus_460#0 GTATCCTTACAACGATGAAGAGACCAGCTTGGGCAAAGGCAAGGGAAGAATTACTTAAAC 240
consensus_460#1 GTATCCTTACAACGATGAAGAGACCAGCTTGGGCAAAGGCAAGGGAAGAATTACTTAAAC 195
consensus_460#2 ACATATCTGCCATATCCCTCA----AGCTTTGTTCGAGCGTTTGAGCGAATCGTGTCG-C 157
consensus_460#3 GAGGCTCTAAACTGGGCGAAAG---CAATGTGCCAAGGGGATCCTGATAGTCAAACCGCC 128
* * * * * * * *
consensus_460#0 GTACGTATTATTTTTA-ATTATAACTCTACTATTAATATAATTAATTA-ATTCAACAATA 298
consensus_460#1 ACGAACAAAATCGGCACAATTTGGAATTGTTGGAAAGATGTCTGTGCGTGGTGTGTATCG 255
consensus_460#2 GTTTGTTTTACCATCACTATGAAAAGCGGACACCGAAAATATGAAAC--------CATTG 209
consensus_460#3 ACTCAACAGAGCACTCAAGACGAAGGCACCAAAAGACAAGAAAGAATCAAGGAATTATTC 188
* * * *
consensus_460#0 ATGTTGATAAAATAATTACAATATC--ACAAATAAATGAA--GCAAATAAA--A-ATCTT 351
consensus_460#1 ACGATGATATATTACCAGCGACGTTCAACAATCCTCTGAA--GAAAGAGGATCG-ATGGA 312
consensus_460#2 CTTCTGAGATTATAAGCGCAACC----ATAACCATCTGGA--ACAACTGGCCCGTACCCG 263
consensus_460#3 GACCTAGCAGTACAGAGACAAAC-----TAAGGAAATGAACGATAACATAAATGGTTATG 243
* * * * * ** ** * **
consensus_460#0 TAAATAAAACAAGTT-TATAAATTTTATTAAATATATTTATTATTTAAGTAATTTTAATT 410
consensus_460#1 TCGATAATCGAGATTACGCGAACGTACTTCATCACGTTCTTCATGGCGGAGGTTCCAGAC 372
consensus_460#2 ATGATGGCATCATTT-TTCGAAGTTACCT-GTGATGTCGAGAGAGCAAAGTGATTCACTA 321
consensus_460#3 GAATTGACAACCATTTAATGGGCCTTCGTTATGCCGCGCAGGAAGTTGGAGAA-CCGGTT 302
* ** * *
consensus_460#0 ATTCATTTCCT--CTCATTATTAAAAGAAGAATACATTTACGTTT---ATTTGCTCTTAA 465
consensus_460#1 ATTTGGGCGCGAATCGATGGTTCGATAAAACATTCCACGCCATTCTCGGCAAGGACGGAA 432
consensus_460#2 TCTTGTAAGCT------TGATCCGTGAAAATATCCGGAACCGGTT----CTCCAACTTCC 371
consensus_460#3 CCGGATATTTTCACGGATCAAGCTTACAAG-ATAGTGAATCACTT----TGCTCTCTCGA 357
* ** ** * * *
consensus_460#0 TATTATGAACTAA--ATGAACAC---GTAAGTGAAAAT---GTGACTCATAGCATTTACA 517
consensus_460#1 TGTGGGGCATGAATTACGAACATTCGGCTGGCGAAGGTCCAGCGATTTTTATCACATTCG 492
consensus_460#2 TGCGCGGCATAACGAAGGCCCATTAAATGGTTGTCAATTCCATAACCATTTATGTTATCG 431
consensus_460#3 CATCACAGGTAACTTCGAAAAATGATGCCATCATCGGGTACGGGCCAGTTGTTCCAGATG 417
* * *
consensus_460#0 ACCA--GTTAA---AGTAATCTCATTGCAAGTTTTCCAGCAACCCTTCCACCACGT-ACC 571
consensus_460#1 AGGA--ATTAACAGAGAAAGTCGATGCCATGTCACCACCCGAGGAAAACACCGTTCCATC 550
consensus_460#2 TTCA--TTTCC----TTAGTTTGTCTCTGTACTGCTAGGTCGAATAATTCCTTGAT--TC 483
consensus_460#3 GTTATGGTTGCGCTTATAATCTCAGAAGCAATGGTTTCATATTTTCGGTGTCCGCTTTTC 477
* ** * *
consensus_460#0 CTTCTAGGCCATAATTAACGGCTGTTCTACTCTCGCCAATATTCGCAATATTCCCATTAG 631
consensus_460#1 GCATTTGCCTGCACCTGAAAA--GCTCGAGTGGCATCTATCCGAACAAAGTTTTAGCGAT 608
consensus_460#2 TTTCTTGGC----ATCAAAAGATATCATTGCATCTCTGATATCGCTAAAACTTTGTTCGG 539
consensus_460#3 ATAGTGATGGTAAAACAAACGCGACACGATTCGCTCAAACGCTCGAACAAAGCTTGAGGG 537
* * * * *
consensus_460#0 CCCCCTAACCCGATCTTACCCAACGA 657
consensus_460#1 ATCAGAGATGCAATG----------- 623
consensus_460#2 ATAGATG------------------- 546
consensus_460#3 ATATGG-------------------- 543
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |