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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_483#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence
[CGAAATCGACAGTCGGACGTGGTTCGGATCGCTGAGCGCGATCGTTTACCTGTGAACCGGCAACGAATCGGTGCTTGCGGTCAATGAAGTCACGTAAGAGCCGCGAGAAAAGTAAGTTCATCAATCATAAAGGCCGACTGTAGTGCCGCTCGAGTTTCCTCTCCGATAATCGGTGCAGGCCAAGTCGATACGTCGTGCCGTGGAAAGAGATCCTCCTTGAGACGAAGGGATTGACACGACAGCCCAGGCCCGAACACATCTCCCCCTTTATCGCGAAACCGTTCGTTGCGGTGTGTCAGTGCTAACAGCTGCCAAAGATGCAACGGCAAGGGGGTTCCACCGCCGGTGCCCTTGCCCTTGGCGGCAGGCACAAGCCGGAGGAGCTTTCCACATTGGCGNNNAACACCAGATTCTCGAGGAAGGAAATACAGCTTATCTATCGCGGTTTTAAGCAGGAGTGTCCCACGGGCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTTCTTCCCCCAAGNTGACGCTAGCCAGTATGCTCATTATGTCTTCAACACTATGAAGAGGAA]
[+] EMBL BI509686 [CGAAATCGACAGTCGGACGTGGTTCGGATCGCTGAGCGCGATCGTTTACCTGTGAACCGGCAACGAATCGGTGCTTGCGGTCAATGAAGTCACGTAAGAGCCGCGAGAAAAGTAAGTTCATCAATCATAAAGGCCGACTGTAGTGCCGCTCGAGTTTCCTCTCCGATAATCGGTGCAGGCCAAGTCGATACGTCGTGCCGTGGAAAGAGATCCTCCTTGAGACGAAGGGATTGACACGACAGCCCAGGCCCGAACACATCTCCCCCTTTATCGCGAAACCGTTCGTTGCGGTGTGTCAGTGCTAACAGCTGCCAAAGATGCAACGGCAAGGGGGTTCCACCGCCGGTGCCCTTGCCCTTGGCGGCAGGCACAAGCCGGAGGAGCTTTCCACATTGGCGNNNAACACCAGATTCTCGAGGAAGGAAATACAGCTTATCTATCGCGGTTTTAAGCAGGAGTGTCCCACGGGCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTTCTTCCCCCAAGNTGACGCTAGCCAGTATGCTCATTATGTCTTCAACACTATGAAGAGGAA]
consensusID : consensus_483#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 543 fasta sequence
[AACGAAATCGACAGTCGGACGTGGTTCGGATCGCTGAGCGCGATCGTTTACCTGTGAACCGGCAACGAATCGGTGCTTGCGGTCAATGAAGTCACGTAAGAGCCGCGAGAAAAGGGGTTCCACCGCCGGTGCCCTTGCCCTTGGCGGCAGGCACAAGCCGGAGGAGCTTTCCACATTGGCGGCCAACACCAGATTCTCGAGGAAGGAAATACAGCTTATCTATCGCGGTTTTAAGCAGGAGTGTCCCACGGGCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTTCTTCCCCCAAGGTGACGCTAGCCAGTATGCTCATTATGTCTTCAACACTATGAAGAGGAAACCGTCTGGAAAGATAAGCTTTGAAGAATTCTTGACTATTTTGTCGAAAGTTTCGAGAGGATCGGTAGAGGAAAAGCTGCAATGGATATTTGGACTTTACGATCTGGACGGTGATGGATTGATCAGTAAAGAGGAAATGTTGGATGTTGTTGGTTCGATTTATGAGATGTTGGGCCGTTACACTCAGCC]
[+] EMBL BI511395 [AACGAAATCGACAGTCGGACGTGGTTCGGATCGCTGAGCGCGATCGTTTACCTGTGAACCGGCAACGAATCGGTGCTTGCGGTCAATGAAGTCACGTAAGAGCCGCGAGAAAAGGGGTTCCACCGCCGGTGCCCTTGCCCTTGGCGGCAGGCACAAGCCGGAGGAGCTTTCCACATTGGCGGCCAACACCAGATTCTCGAGGAAGGAAATACAGCTTATCTATCGCGGTTTTAAGCAGGAGTGTCCCACGGGCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTTCTTCCCCCAAGGTGACGCTAGCCAGTATGCTCATTATGTCTTCAACACTATGAAGAGGAAACCGTCTGGAAAGATAAGCTTTGAAGAATTCTTGACTATT ]
[+] EMBL BI511450 [AACGAAATCGACAGTCGGACGTGGTTCGGATCGCTGAGCGCGATCGTTTACCTGTGAACCGGCAACGAATCGGTGCTTGCGGTCAATGAAGTCACGTAAGAGCCGCGAGAAAAGGGGTTCCACCGCCGGTGCCCTTGCCCTTGGCGGCAGGCACAAGCCGGAGGAGCTTTCCACATTGGCGGCCAACACCAGATTCTCGAGGAAGGAAATACAGCTTATCTATCGCGGTTTTAAGCAGGAGTGTCCCACGGGCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTT ]
[+] EMBL BI510499 [ cgGGGGCATTTTAGGGGGTTCCACCGCCGGTGCCCTTGCCCTTGGCGGCAGGCACAAGCCGGAGGAGCTTTCCACATTGGCGGCCAACACCAGATTCTCGAGGAAGGAAATACAGCTTATCTATCGCGGTTTTAAGCAGGAGTGTCCCACGGGCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTTCTTCCCCCAAGGTGACGCTAGCCAGTATGCTCATTATGTCTTCAACACTATGAAGAGGAAACCGTCTGGAAAGATAAGCTTTGAAGAATTCTTGACTATTTTGTCGAAAGTTTCGAGAGGATCGGTAGAGGAAAAGCTGCAATGGATATTTGGACTTTACGATCTGGACGGTGATGGATTGATCAGTAAAGAGGAAATGTTGGATGTTGTTGGTTCGATTTATGAGATGTTGGGCCGTTACACTCAGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_483#0 --CGAAATCGACAGTCGGACGTGGTTCGGATCGCTGAGCGCGATCGTTTACCTGTGAACC 58
consensus_483#1 AACGAAATCGACAGTCGGACGTGGTTCGGATCGCTGAGCGCGATCGTTTACCTGTGAACC 60
**********************************************************
consensus_483#0 GGCAACGAATCGGTGCTTGCGGTCAATGAAGTCACGTAAGAGCCGCGAGAAAAGTAAGTT 118
consensus_483#1 GGCAACGAATCGGTGCTTGCGGTCAATGAAGTCACGTAAGAGCCGCGAGAAAAG-GGGTT 119
****************************************************** ***
consensus_483#0 CATCAATCATAAAGGCCGACTGTAGTGCC--GCTCGAGTTTCCTCTCCGATAATCGGTGC 176
consensus_483#1 CCACCGCCGGTGCCCTTGCCCTTGGCGGCAGGCACAAGCCGGAGGAGCTTTCCACATTGG 179
* * * * * * * * * ** * ** * * * **
consensus_483#0 AGGCCAAGTCGATACGTCGTGCCGTGGAAAGAGATCCTCCTTGAGACGAAGGGATTGACA 236
consensus_483#1 CGGCCAACACCAGAT----TCTCGAGGAAGGAAATACAGCTTATCTATCGCGGTTTTAAG 235
****** * * * * ** **** ** ** * *** ** ** *
consensus_483#0 CGACAGCCCAGGCCCGAACACATCTCCCCCTTTATCGCGAAACCGTTCGTTGCGGTGTGT 296
consensus_483#1 CAGGAGTGTCCCACGGGCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTTC 295
* ** * * * * ** * **** * ** * * **
consensus_483#0 CAGTGCTAACA-GCTGCCAAAGATGCAACGGCAAGGGGGTTCCACCGCCGGTGCCCTTGC 355
consensus_483#1 TTCCCCCAAGGTGACGCTAGCCA-GTATGCTCATTATGTCTTCAACACTA-TGAAGAGGA 353
* ** * ** * * * * ** * * ** * * ** *
consensus_483#0 CCTTGGCGGCAGGCACAAGCCG-GAGGAGCTTT---CCACATTGGCGNNNAACACCAGAT 411
consensus_483#1 AACCGTCTGGAAAGATAAGCTTTGAAGAATTCTTGACTATTTTGTCGAAAGTTTCGAGAG 413
* * * * * **** ** ** * * * * *** ** * ***
consensus_483#0 TCTCGAGGAAGGAAATACAGCT-TATCTATCGCGGTTTTAAG--CAGGAGTGTCCCACGG 468
consensus_483#1 GATCGGTAGAGGAAAAGCTGCAATGGATATTTGGACTTTACGATCTGGACGGTGATGGAT 473
*** ****** * ** * *** * **** * * *** **
consensus_483#0 GCCTCGTCGACGAGGAAGCTTTTAAACAGATCTTCTCACAGTTCTTCCCCCAAGNTGACG 528
consensus_483#1 TGATCAGTAAAGAGGAAATGTT-----GGATGTTGTTG--GTTCGATTTATGAGATGTTG 526
** * ****** ** *** ** * **** ** ** *
consensus_483#0 CTAGCCAGTATGCTCATTATGTCTTCAACACTATGAAGAGGAA 571
consensus_483#1 --GGCCGTTACACTCAGCC------------------------ 543
*** ** ****
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |