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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_486#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 781 fasta sequence
[GAATTCAAAAGAATCGAAATAATGGAAAAATTACGAGCATTTCTTAATGATGATGTATTTTTTCGCACTATGAGCGAATTAGTTGCTATGCAAGGGCCTCTTACTGTTTTTTGTCATGGTGATTGTTGGACTAATAATATTTTATTTAGAGATGATTTGACTAAATCAAATGAGGAAGTTGTCTATTTAATTGATTTTCAACTAACTCGAGTTGGTTCACTTGCCCTTGATCTTGCGAATTTGTTGTACTGTTGTGCAAGTGGAGAAATTAGACGAGCGCACATGACACAACTTCTTCAACATTATCATTTCCATCTAATGTCTTCATTACATACGCTTAATCCAAAACAGCCACCAAAAGATCCATCTGTAATGTGGGAACTATTAAATGAAGAAATGCGACGATGTGGCCGATTTGGCGTAGGTCTCGCATTGGATATTTTACCAATTAGTACATGCGAAAGTGAAGAAGCTCCAGATTTATATGAAAAATCAAAAACCAATAAAGGAAAGGAAAATACACGAGCACCACCACGAGAAGGAGCTGAATGTGCTCGACTTATGACTGATTTAGTTTTGGAACTTGTGCATAATCATGCTTTATAGATTGAATTATAAAAAATCTTTATAAATATTATTCTAGAAAATAATCTTTGTTATGTTATTATAAAGTAAATTAATTTTAATGTAATGTATTATTTAATATTTAATACGCGTTATATATACGCGTATTAAGAATTATACAAATTTCGATAAAAATTTGGCATTTTATATAATGCAA]
[+] EMBL BI507709 [GAATTCAAAAGAATCGAAATAATGGAAAAATTACGAGCATTTCTTAATGATGATGTATTTTTTCGCACTATGAGCGAATTAGTTGCTATGCAAGGGCCTCTTACTGTTTTTTGTCATGGTGATTGTTGGACTAATAATATTTTATTTAGAGATGATTTGACTAAATCAAATGAGGAAGTTGTCTATTTAATTGATTTTCAACTAACTCGAGTTGGTTCACTTGCCCTTGATCTTGCGAATTTGTTGTACTGTTGTGCAAGTGGAGAAATTAGACGAGCGCACATGACACAACTTCTTCAACATTATCATTTCCATCTAATGTCTTCATTACATACGCTTAATCCAAAACAGCCACCAAAAGATCCATCTGTAATGTGGGAATTATTAAATGAAGAAATGCGACGATGTGGCCGATTTGGCGTAGGTCTCGCATTGGATATTTT ]
[+] EMBL BI510413 [ ATGGTGATTGTTGGACTAATAATATTTTATTTAGAGATGATTTGACTAAATCAAATGAGGAAGTTGTCTATTTAATTGATTTTCAACTAACTCGAGTTGGTTCACTTGCCCTTGATCTTGCGAATTTGTTGTACTGTTGTGCAAGTGGAGAAATTAGACGAGCGCACATGACACAACTTCTTCAACATTATCATTTCCATCTAATGTCTTCATTACATACGCTTAATCCAAAACAGCCACCAAAAGATCCATCTGTAATGTGGGAACTATTAAATGAAGAAATGCGACGATGTGGCCGATTTGGCGTAGNTCTCGCATTGGATATTTTACCAATTAGTACATGCGAAAGTGAAGAAGCTCCAGATTTATATGAAAAATCAAAAACCAATAAAGGAAAGGAAAATACACGAGCACCACCACGAGAAGGAGCTGAATGTGCTCGACTTATGACTGATTTAGTTTTGGAACTTGTGCATAATCATGCTTTATAGATTGAATTATAAAAAATCTTTATAAATATTATTC ]
[-] EMBL BI509587 [ TACTGTTGTGCAAGTGGAGAAATTAGACGAGCGCACATGACACAACNNCTTCAACATTATCATTTCCATCTAATGTCTTCATTACATACGCTTAATCCAAAACAGCCACCAAAAGATCCATCTGTAATGTGGGAACTATTAAATGAAGAAATGCGACGATGTGGCCGATTTGGCGTAGGTCTCGCATTGGATATTTTACCAATTAGTACATGCGAAAGTGAAGAAGCTCCAGATTTATATGAAAAATCAAAAACCAATAAAGGAAAGGAAAATACACGAGCACCACCACGAGAAGGAGCTGAATGTGCTCGACTTATGACTGATTTAGTTTTGGAACTTGTGCATAATCATGCTTTATAGATTGAATTATAAAAAATCTTTATAAATATTATTCTAGAAAATAATCTTTGTTATGTTATTATAAAGTAAATTAATTTTAATGTAATGTATTATTTAATATTTAATACGCGTTATATATACGCGTATTAAGAATTATACAAATTTCGATAAAAATTTGGCATTTTATATAATGCAA]
consensusID : consensus_486#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 667 fasta sequence
[GTGGAAATTACCAGTTTGGAAGAAGAATTCGGTTCAGGAAGAGGTGACAATTATACATCTATGTTGTATCGTATTCGAGCAAAAGGTCGAAAACAGATAAAAAATAATGAATGGATCAATTATGAATGTGCAATAATTTATAAAGTTTTACCCCAATCAAGAGAACATCGTGAAGCTTTTAAAAGTGAACTACTATTTCAAAACGAAGTAGCATTTTATACGCATGTATGGCCTGCATTAAATAAGTTACAAACAAATGGTAGAAAAGTTTTTAACGGCGTTGCAAAAATATATGCAGCACAAATTGATTTTATCGCTATGGAAGATTTACGAGAAAGAGGTTTTAAAATGGCAGATAGAAGAAAAGGACTGCAACTTGAGCATTTGAAACGAACATTGAAAGCTTTAGCAGGTTTTCATGCACTGAGTTTAACTCTTAGAGAAACAAGGCCAGAAGAATTTGCAAGACTGACAGATCCAAGTGAAGGTAAAGGTATTCAAGAAGCACTTTTTCGAACAGAAAATGAAAATTGGTACCGTCAATACTATCAAGTTGCTGCTANGAATGCTATTAGAATGGTATCTGATGGTCTTCCTCCTCAAATGGAATTCAAAAGAATCGAAATAATGGAAAAATTACGAGCATTTCTTAATGATGATGTATTTT]
[+] EMBL BI507978 [GTGGAAATTACCAGTTTGGAAGAAGAATTCGGTTCAGGAAGAGGTGACAATTATACATCTATGTTGTATCGTATTCGAGCAAAAGGTCGAAAACAGATAAAAAATAATGAATGGATCAATTATGAATGTGCAATAATTTATAAAGTTTTACCCCAATCAAGAGAACATCGTGAAGCTTTTAAAAGTGAACTACTATTTCAAAACGAAGTAGCATTTTATACGCATGTATGGCCTGCATTAAATAAGTTACAAACAAATGGTAGAAAAGTTTTTAACGGCGTTGCAAAAATATATGCAGCACAAATTGATTTTATCGCTATGGAAGATTTACGAGAAAGAGGTTTTAAAATGGCAGATAGAAGAAAAGGACTGCAACTTGAGCATTTGAAACGAACATTGAAAGCTTTAGCAGGTTTTCATGCACTGAGTTTAACTCTTAGAGAAACAAGGCCAGAAGAATTTGCAAGACTGACAGATCCAAGTGAAGGTAAAGGTATTCAAGAAGCACTTTTTCGAACAGAAAATGAAAATTGGTACCGTCAATACTATCAAGTTGCTGCTANGAATGCTATTAGAATGGTATCTGATGGTCTTCCTCCTCAAATGGAATTCAAAAGAATCGAAATAATGGAAAAATTACGAGCATTTCTTAATGATGATGTATTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_486#0 GAATTCAAAAGAATCGAAATAATGGAAAAATTACGAGCATTTCTTAATGATGATGTATTT 60
consensus_486#1 ---GTGGAAATTACCAGTTTGGAAGAAGAATTCGGTTCAGGAAGAGGTGACAAT-TATAC 56
* *** * * * *** **** * ** *** ** ***
consensus_486#0 TTTCGCACTATGAGCGAATTAGTTGCTATGCAAGGGCCTCTTACTGTTTTTTGTCATGGT 120
consensus_486#1 ATCTATGTTGTATCGTATTCGAGCAAAAGGTCGAAAACAGATAAAAAATAATGAATGGAT 116
* * * * * * * * ** * ** * *
consensus_486#0 GATTGTTGGACTAATAATATTTTATTTAGAGATGATTTGACTAAATCAAATGAGGAAGTT 180
consensus_486#1 CAATTATGAATGTGCAATAATTTAT-----AAAGTTTTACCCCAATCAAGAGAACATCGT 171
* * ** * **** ***** * * *** * ****** ** * *
consensus_486#0 GTCTATTTAATTGATTTTCAACTAACTCGAGTTGGTTCACTTGCCCTTGAT-CTTGCGAA 239
consensus_486#1 GAAGCTTTTAAAAGTGAACTACTATTTCAAAACGA---AGTAGCATTTTATACGCATGTA 228
* *** * * * **** ** * * * * ** ** ** * * *
consensus_486#0 TTTGTTGTACTGTTGTGCAAGTGGAGAAATTAGACGAGCGCACATGACACAACTTCTTCA 299
consensus_486#1 TGGCCTGCATTAAATAAGTTACAAACAAATGGTAGAAAAGTTTTTAACGGCGTTGCAAAA 288
* ** * * * **** * * * * ** * * *
consensus_486#0 ACATTATCATTTCCATCTAATGTCTTCATTACATACGCTTAATCCAAAACAGCCACCAAA 359
consensus_486#1 ATATATGCAGCACAAATTGATTTTATCGCTATGGAAGATTTACGAGAAAGAGGTTTTAAA 348
* ** ** * * * ** * ** ** * * ** * *** ** ***
consensus_486#0 AGATCCATCTGTAATGTGGGAACTATTAAATGAAGAAATGCGACGA-TGTGGCCGATTTG 418
consensus_486#1 ATGGC-AGATAGAAGAAAAGGACTGCAACTTGAGCATTTGAAACGAACATTGAAAGCTTT 407
* * * * ** * *** * *** * ** **** * * **
consensus_486#0 GCGTAGGTCTCGCATTGGATATTTTACCAATTAGTACATGCGAAAGTGAAGAAGCTCCAG 478
consensus_486#1 A-GCAGGTTTT-CATGCACTGAGTT--TAACTCTTAGAGAAACAAGGCCAGAAG-----A 458
* **** * *** * ** ** * ** * *** *****
consensus_486#0 ATTTATATGAAAAATCAAAAACCAATAAAGGAAAGGAAAATACACGAGCACCACCACGAG 538
consensus_486#1 ATTTGCAAGACTGA-CAGATCCAAGTGAAGGTAAAGGTATTCAAGAAGCACTTTTTCGAA 517
**** * ** * ** * * * * **** ** * * * * ***** ***
consensus_486#0 AAGGAGCTGAATGTGCTCGACTTATGACTGATTTAGTTTTGGAACTTGTGCATAATCATG 598
consensus_486#1 CAGAAAATGAA--------AATTGGTACCGTCAATACTATCAAGTTGCTGC-TANGAATG 568
** * **** * ** ** * * * * * *** ** ***
consensus_486#0 CTTTATAGATTGAATT--ATAAAAAATCTTTATAAATATTATTCTAGAAAATAATCTTTG 656
consensus_486#1 CTATTAGAATGGTATCTGATGGTCTTCCTCCTCAAATGGAATTC---AAAAGAATCGAAA 625
** * ** * ** ** ** **** **** **** ****
consensus_486#0 TTATGTTATTATAAAGTAAATTAATTTTAATG-TAATGTATTATTTAATATTTAATACGC 715
consensus_486#1 TAATGGAAAAATTACGAGCATT--TCTTAATGATGATGTATTTT---------------- 667
* *** * ** * * *** * ****** * ******* *
consensus_486#0 GTTATATATACGCGTATTAAGAATTATACAAATTTCGATAAAAATTTGGCATTTTATATA 775
consensus_486#1 ------------------------------------------------------------
consensus_486#0 ATGCAA 781
consensus_486#1 ------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |