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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_490#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 878 fasta sequence
[GGACAATTCTCCATCGCGGCGAACTTGTTGTGCCGGTGTTAAAAGTTAAAAACTTTTCGAAAACAATTCGGAACAATTCTCCGCTCAAGCGCGTAAGCAAGCACCAGTCCACACCCCCGACGAAAACGATGGAATTATCGATCGCGTTGCTATTCGAGCCGACAACTTTTCGCTAGGCTGACGGCAAAACCGTGGGGGACGCCACCGTTCCTCTTTTCTACCGGAGGAAAGGAAAACGTTCGCGTCTCGTTTCGATGTTGCGAAAATGAGTCCGGGACCGTCGAAACGTTGTGCTCCGCTACGTGTCGTTGAACTGTGCCTGTGATCTGTGCGATAAAAAATATTTCGCGAATTAATCCCCGCCGATTCTCTGCCACACGACAGGCTCGACTCATGATGCAATATCCAAACATCGATATACAAGAGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGATAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAGGACAATGTTGCCAATTGTTTTTTCGAAGAGGCTCGAAAATACCGAGAGAACGCTAAGGAGAGGTGGAACTTCGACTTCGAGAAGGAGGAACCTCTACCCGGTCGTTACGTATGGGTGAAGCTTGATCAACACGGAAATGAAATTCGTAATCCGCTGGAGGCGAACAGCCGAGTAGAAAATATACAAACGATGCAGGAAGAAGACGCACAAGACGATGACGTTACGATGCAAGATCATGCGGAGGATAAGGATGACGATAAAATGACTGATAGTACGTGAACGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAATAACAAAATAAAACGTAGTAACAAAAATAAAAATTTGCTCAT]
[+] EMBL BI516353 [GGACAATTCTCCATCGCGGCGAACTTGTTGTGCCGGTGTTAAAAGTTAAAAACTTTTCGAAAACAATTCGGAACAATTCTCCGCTCAAGCGCGTAAGCAAGCACCAGTCCACACCCCCGACGAAAACGATGGAATTATCGATCGCGTTGCTATTCGAGCCGACAACTTTTCGCTAGGCTGACGGCAAAACCGTGGGGGACGCCACCGTTCCTCTTTTCTACCGGAGGAAAGGAAAACGTTCGCGTCTCGTTTCGATGTTGCGAAAATGAGTCCGGGACCGTCGAAACGTTGTGCTCCGCTACGTGTCGTTGAACTGTGCCTGTGATCTGTGCGATAAAAAATATTTCGCGAATTAATCCCCGCCGATTCTCTGCCACACGACAGGCTCGACTCATGATGCAATATCCAAACATCGATATACAAGNGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGATAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAG ]
[+] EMBL BI503896 [ TGTTGCGAAAATGAGTCCGGGACCGTCGAAACGTTGTGCTCCGCTACGTGTCGTTGAACTGTGCCTGTGATCTGTGCGATAAAAAATATTTCGCGAATTAATCCCCGCCGATTCTCTGCCACACGACAGGCTCGACTCATGATGCAATATCCAAACATCGATATACAAGAGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGATAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAGGACAATGTTGCCAATTGTTTTTTCGAAGAGGCTCGAAAATACCGAGAGAACGCTAAGGAGAGGTGGAACTTCGACTTCGAGAAGGAGGAACCTCTACCCGGTCGTTACGTATGGGTGAAGCTTGATCAACACGG ]
[+] EMBL BI507828 [ CGTGTCGTTGAACTGTGCCTGTGATCTGTGCGATAAAAAATATTTCGCGAATTAATCCCCGCCGATTCTCTGCCACACGACAGGCTCGACTCATGATGCAATATCCAAACATCGATATACAAGAGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGATAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAGGACAATGTTGCCAATTGTTTTTTCGAAGAGGCTCGAAAATACCGAGAGAACGCTAAGGAGAGATGGAACTTCGACTTCGAGAAGGAGGAACCTCTACCCGGTCGTTACGTATGGGTGAAGCTTGATCAACACGGAAATGAAATTCGTAATCCGCTGGAGGCGAACAGCCGAGTAGAAAATATACAAACGATGCAGGAAGAAGACGCACAAGACGATGACGTTACGATGCAAGATCATGCGGAGGATAAGGATGACGATAAAATGACTGATAGTACGTGAACGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAATAACAAAATAAAACGTAGTAACAAAAATAAAAATTTGCTCAT]
consensusID : consensus_490#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence
[CCCGTGAAATCGCAATCGTTCTCGTACGCGGACAATTCTCCATCGCGGCGAACTTGTTGTGCCGGTGTTAAAAGTTAAAAACTTTTCGAAAACAATTCGGAACAATTCTCCGCGTAAGCAAGGTTCGGGACGACGAATGCCGGTGAATTCGGATACGCGACCGATTCGTACCTCCGGGGACCGACAAGTAACGAGCGAACGACCTAGGGCTCGACTCATGATGCAATATCCAAACATCGATATACAAGAGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGATAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAGGACAATGTTGCCAATTGTTTTTTCGAAGAGGCTCGAAAATACCGAGAGAACGCTAAGGAGAGATGGAACTTCGACTTCGAGAAGGAGGAACCTCTACCCGGTCGTTACGTATGGGTGAAGCTTGATCAACACGGAAATGAAATTCGTAATCCGCTGGAGGCGAACAGCCGAGTAGAAAA]
[+] EMBL BI510331 [CCCGTGAAATCGCAATCGTTCTCGTACGCGGACAATTCTCCATCGCGGCGAACTTGTTGTGCCGGTGTTAAAAGTTAAAAACTTTTCGAAAACAATTCGGAACAATTCTCCGCGTAAGCAAGGTTCGGGACGACGAATGCCGGTGAATTCGGATACGCGACCGATTCGTACCTCCGGGGACCGACAAGTAACGAGCGAACGACCTAGGGCTCGACTCATGATGCAATATCCAAACATCGATATACAAGAGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGATAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAGGACAATGTTGCCAATTGTTTTTTCGAAGAGGCTCGAAAATACCGAGAGAACGCTAAGGAGAGATGGAACTTCGACTTCGAGAAGGAGGAACCTCTACCCGGTCGTTACGTATGGGTGAAGCTTGATCAACACGGAAATGAAATTCGTAATCCGCTGGAGGCGAACAGCCGAGTAGAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_490#0 GGACAATTCTCCATCGCGGCGAACTTGTTGTGCCGGTGTTAAAAGTTAAAAACTTTTCGA 60
consensus_490#1 ------------------------------------------------------------
consensus_490#0 AAACAATTCGGAACAATTCTCCGCTCAAGCGCGTAAGCAAGCACCAGTCCACACCCCCGA 120
consensus_490#1 ------------------------------------------------------------
consensus_490#0 CGAAAACGATGGAATTATCGATCGCGTTGCTATTCGAGCCGACAACTTTTCGCTAGGCTG 180
consensus_490#1 -----CCCGTGAAATCG-CAATCGTTCTCGTAC----GCGGACAATTCTCCATCG----- 45
* ** *** * **** * ** ** ***** * * *
consensus_490#0 ACGGCAAAACCGTGGGGGACGCCACCGTTCCTCTTTTCTACCGGAGGAAAGGAAAACGTT 240
consensus_490#1 -CGGCGAACTTGTTG----TGCCGGTGTTAAAAGTTAAAAACTTTTCGAAAACAA---TT 97
**** ** ** * *** *** ** * * ** ** **
consensus_490#0 CGCGTCTCGTTTCGATGTTGCGAAAATGAGTCCGGGACCGTCGAAAC-GTTGTGCTCCGC 299
consensus_490#1 CGGAACAATTCTCCGCGT----AAGCAAGGTTCGGGACGACGAATGCCGGTGAATTCGGA 153
** * * ** ** ** ** ****** * * * ** ** *
consensus_490#0 TACGTGTCGTTGAACTGTGCCTGTGATCTGTGCGATAAAAAATATTTCGCGAATTAATCC 359
consensus_490#1 TACGCG--ACCGATTCGTACCT-----CCGGGGACCGACAAGTAACGAGCGAACGA---- 202
**** * ** ** *** * * * * ** ** ***** *
consensus_490#0 CCGCCGATTCTCTGCCACACGACAGGCTCGACTCATGATGCAATATCCAAACATCGATAT 419
consensus_490#1 ----------CCTA---------GGGCTCGACTCATGATGCAATATCCAAACATCGATAT 243
** ************************************
consensus_490#0 ACAAGAGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGA 479
consensus_490#1 ACAAGAGGGGAGAAGGATTCGTAGCGTGCGAAGAAGACTTTTTCAAGACGACGATGACGA 303
************************************************************
consensus_490#0 TAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAGGACAATGTTGCCAATTGTTTTTT 539
consensus_490#1 TAATGAAACGGAATCGGGGCGAAATTCCCGTATCGAGGACAATGTTGCCAATTGTTTTTT 363
************************************************************
consensus_490#0 CGAAGAGGCTCGAAAATACCGAGAGAACGCTAAGGAGAGGTGGAACTTCGACTTCGAGAA 599
consensus_490#1 CGAAGAGGCTCGAAAATACCGAGAGAACGCTAAGGAGAGATGGAACTTCGACTTCGAGAA 423
*************************************** ********************
consensus_490#0 GGAGGAACCTCTACCCGGTCGTTACGTATGGGTGAAGCTTGATCAACACGGAAATGAAAT 659
consensus_490#1 GGAGGAACCTCTACCCGGTCGTTACGTATGGGTGAAGCTTGATCAACACGGAAATGAAAT 483
************************************************************
consensus_490#0 TCGTAATCCGCTGGAGGCGAACAGCCGAGTAGAAAATATACAAACGATGCAGGAAGAAGA 719
consensus_490#1 TCGTAATCCGCTGGAGGCGAACAGCCGAGTAGAAAA------------------------ 519
************************************
consensus_490#0 CGCACAAGACGATGACGTTACGATGCAAGATCATGCGGAGGATAAGGATGACGATAAAAT 779
consensus_490#1 ------------------------------------------------------------
consensus_490#0 GACTGATAGTACGTGAACGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAATAA 839
consensus_490#1 ------------------------------------------------------------
consensus_490#0 CAAAATAAAACGTAGTAACAAAAATAAAAATTTGCTCAT 878
consensus_490#1 ---------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |