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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_526#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2134 fasta sequence
[CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGTCATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGATTTCTATTTATCAGTAGAATGGGATATTTTAGAAGTACCAGCATCGAGAAATGAAGAATATTATCCATGTTGCACAGAACCCTATTCTGATATCACTTTTAATATTACAATGCGAAGAAAAACATTATTCTATACGGTTAACTTAATAATTCCTTGCGTGGGTATTACATTCCTTACAGTACTTGTATTTTATCTACCAAGTGATTCTGGTGAAAAAGTATCATTATGTTCTTCCATTCTCCTTTCATTGACGGTATTCTTTTTATTATTAGCCGAAATTATTCCACCAACATCTCTGGCTATACCACTTTTAGGAAAATATTTACTATTTACCATGATTTTAGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATCTACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCTAATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGGATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATTAAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGATGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATATTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAAAAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGATAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATTTCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGGAATATCACCTCGCAATTATATGTATCCAAATATAGACATTTCTCCAGAAGGATAAATTTTGAAATTCATAATATGTATAATACGCGTAAAAAGACTATATATAATATAAAAATATTAAATCATTAATATTCTATTTATATCTATTTTATTTCTTATAATTTTAGATTGATTTTTATAAACACAGAATTTATATCAAATATAATCTAAATAGTTTTATTAACCCTAAATTAAACAGTATTCACAACTAAATATTTTATTTAAAAAAAAGCAATTTTAAAAAAATTTTTAGGTTTAATTATATTAAAATTTGTAGTACAAGTATTTACATTTTATATTTCGTTCTTTCATTTACACATTAAAGTTAATAAGAAATTTATATTACAAAATAACCTTAAAATTCAAAATGACTATTATTTTAGACGAAATTATATATGATTTTATTATAATAATGAAAAAGTATAATAAAGTAATTTATTA]
[+] EMBL AF514804 [CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGTCATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGATTTCTATTTATCAGTAGAATGGGATATTTTAGAAGTACCAGCATCGAGAAATGAAGAATATTATCCATGTTGCACAGAACCCTATTCTGATATCACTTTTAATATTACAATGCGAAGAAAAACATTATTCTATACGGTTAACTTAATAATTCCTTGCGTGGGTATTACATTCCTTACAGTACTTGTATTTTATCTACCAAGTGATTCTGGTGAAAAAGTATCATTATGTTCTTCCATTCTCCTTTCATTGACGGTATTCTTTTTATTATTAGCCGAAATTATTCCACCAACATCTCTGGCTATACCACTTTTAGGAAAATATTTACTATTTACCATGATTTTAGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATCTACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCTAATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGGATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATTAAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGATGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATATTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAAAAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGATAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATTTCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGGAATATCACCTCGCAATTATATGTATCCAAATATAGACATTTCTCCAGAAGGATAAATTTTGAAATTCATAATATGTATAATACGCGTAAAAAGACTATATATAATATAAAAATATTAAATCATTAATATTCTATTTATATCTATTTTATTTCTTATAATTTTAGATTGATTTTTATAAACACAGAATTTATATCAAATATAATCTAAATAGTTTTATTAACCCTAAATTAAACAGTATTCACAACTAAATATTTTATTTAAAAAAAAGCAATTTTAAAAAAATTTTTAGGTTTAATTATATTAAAATTTGTAGTACAAGTATTTACATTTTATATTTCGTTCTTTCATTTACACATTAAAGTTAATAAGAAATTTATATTACAAAATAACCTTAAAATTCAAAATGACTATTATTTTAGACGAAATTATATATGATTTTATTATAATAATGAAAAAGTATAATAAAGTAATTTATTA]
[+] EMBL BI511350 [CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGTCATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATAT ]
[-] EMBL BI503385 [ TTACCATGATTTTAGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATCTACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCTAATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGGATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATTAAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGATGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATATTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAAAAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGATAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATTTCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGG ]
consensusID : consensus_526#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 648 fasta sequence
[AATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAATTTATATTTCATTTAGGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAATCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGAT]
[+] EMBL BI508716 [AATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAATTTATATTTCATTTAGGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAATCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_526#0 CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGT 60
consensus_526#1 ------------------------------------------------------------
consensus_526#0 CATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGA 120
consensus_526#1 -------------------------------AATAATTATGTTTAAAATGCAAATATTGA 29
*****************************
consensus_526#0 CGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACA-----------------GTGT 163
consensus_526#1 CGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAATTTATATTTCATTTAGGTGT 89
*************************************** ****
consensus_526#0 TGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATT 223
consensus_526#1 TGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATT 149
************************************************************
consensus_526#0 ATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCA 283
consensus_526#1 ATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAATCTTGACAGTTCA 209
*********************************************** ************
consensus_526#0 ACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCAC 343
consensus_526#1 ACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCAC 269
************************************************************
consensus_526#0 CAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATA 403
consensus_526#1 CAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATA 329
************************************************************
consensus_526#0 CGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCT 463
consensus_526#1 CGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCT 389
************************************************************
consensus_526#0 ATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATA 523
consensus_526#1 ATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATA 449
************************************************************
consensus_526#0 TACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGT 583
consensus_526#1 TACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGT 509
************************************************************
consensus_526#0 AGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAA 643
consensus_526#1 AGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAA 569
************************************************************
consensus_526#0 TGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAA 703
consensus_526#1 TGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAA 629
************************************************************
consensus_526#0 AGGAATAGATTTAAGCGATTTCTATTTATCAGTAGAATGGGATATTTTAGAAGTACCAGC 763
consensus_526#1 AGGAATAGATTTAAGCGAT----------------------------------------- 648
*******************
consensus_526#0 ATCGAGAAATGAAGAATATTATCCATGTTGCACAGAACCCTATTCTGATATCACTTTTAA 823
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TATTACAATGCGAAGAAAAACATTATTCTATACGGTTAACTTAATAATTCCTTGCGTGGG 883
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TATTACATTCCTTACAGTACTTGTATTTTATCTACCAAGTGATTCTGGTGAAAAAGTATC 943
consensus_526#1 ------------------------------------------------------------
consensus_526#0 ATTATGTTCTTCCATTCTCCTTTCATTGACGGTATTCTTTTTATTATTAGCCGAAATTAT 1003
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TCCACCAACATCTCTGGCTATACCACTTTTAGGAAAATATTTACTATTTACCATGATTTT 1063
consensus_526#1 ------------------------------------------------------------
consensus_526#0 AGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATC 1123
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCT 1183
consensus_526#1 ------------------------------------------------------------
consensus_526#0 AATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGG 1243
consensus_526#1 ------------------------------------------------------------
consensus_526#0 ATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATT 1303
consensus_526#1 ------------------------------------------------------------
consensus_526#0 AAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGA 1363
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATA 1423
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAA 1483
consensus_526#1 ------------------------------------------------------------
consensus_526#0 AAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGA 1543
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATT 1603
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGGAATATC 1663
consensus_526#1 ------------------------------------------------------------
consensus_526#0 ACCTCGCAATTATATGTATCCAAATATAGACATTTCTCCAGAAGGATAAATTTTGAAATT 1723
consensus_526#1 ------------------------------------------------------------
consensus_526#0 CATAATATGTATAATACGCGTAAAAAGACTATATATAATATAAAAATATTAAATCATTAA 1783
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TATTCTATTTATATCTATTTTATTTCTTATAATTTTAGATTGATTTTTATAAACACAGAA 1843
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TTTATATCAAATATAATCTAAATAGTTTTATTAACCCTAAATTAAACAGTATTCACAACT 1903
consensus_526#1 ------------------------------------------------------------
consensus_526#0 AAATATTTTATTTAAAAAAAAGCAATTTTAAAAAAATTTTTAGGTTTAATTATATTAAAA 1963
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TTTGTAGTACAAGTATTTACATTTTATATTTCGTTCTTTCATTTACACATTAAAGTTAAT 2023
consensus_526#1 ------------------------------------------------------------
consensus_526#0 AAGAAATTTATATTACAAAATAACCTTAAAATTCAAAATGACTATTATTTTAGACGAAAT 2083
consensus_526#1 ------------------------------------------------------------
consensus_526#0 TATATATGATTTTATTATAATAATGAAAAAGTATAATAAAGTAATTTATTA 2134
consensus_526#1 ---------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |