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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_59#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1155 fasta sequence
[TTTTTTTTCTTTTTTACATTTTTAATTTTAGAAATAATTTTATACATTTTCATAGAATATGCTTCACGAAGGTACGATCACTATTGCACTACAAAATTTTTCGTCCAATTTCTCCTTTCCGCTGCCTGTTTGGAAATAACTTGAAGTTTTTTTTTTTATTCATTTAGGACACAAGTGCGCACCAAAGCATGACACACCGAGTAAGGGTCGCAATTACTGCTAGGTCTTCTGTCTTCCAAATAGCCTTTCTTTTCTTCAGCAACTCCACGAGGAATGCGAATACTAACATTACGATTGGCCACACCAGCGCTGAAATCGTATATACTACTGGTCTCGCATTTTCCAGTCAGACGTCGCTCGTTGTCTTTTCCTCCGCGTGGATCATACGCTTGAATGTGCCTTAGGTGTTGTTTGCTCAATTTATCAATTGCTTTCTCAATTTCGGCAATGCCATTTTCGGCACGCATCGATTTTGTCGAGAAGTTTGTATGTGCACCTGCACCATTCCACGAACCATCCATAATTTTCGGGTCTAAACTAACAACCACACCAAACTCCTCAGCTACACGATGAAGAATAAATCTAGCAATCCATAAGTCGTCTCCGGCAGATATTCCGCTACACGGGCCGACTTGGAATTCCCATTGTGAGGGCATAACTTCTGCATTAGTACCGGCAATTTTTACGCCAGCATAAAGACAAGCTCGATAATGAGCCTCGACAATTTCGCGACCAATTACTTTGTCGGCGCCTACACCACAATAATAAGGTCCTTGCGGCTTAGGGAAACCATTTTTTGGCCAACCAAGTGGTCTACCATCAAAATCAAGGGAAAGTATA-TTCTTGTTCAATTCCGAACCCATGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTACATTTGGGAAACGTTGGTTGGATGAGGTCGGGGTCATGTCACTGTAGTAGGTATCACATAATACTAATTTGTTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCACTGGACAAAGGAAAATATCGCTGTTTGCGCCATCTGCTTGATAAGTTGAACTACCGTCGAAGGTCCATATTGGTAAATCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGTTTGATCGATGGCTGTG]
[-] EMBL BI507959 [TTTTTTTTCTTTTTTACATTTTTAATTTTAGAAATAATTTTATACATTTTCATAGAATATGCTTCACGAAGGTACGATCACTATTGCACTACAAAATTTTTCGTCCAATTTCTCCTTTCCGCTGCCTGTTTGGAAATAACTTGAAGTTTTTTTTTTTATTCATTTAGGACACAAGTGCGCACCAAAGCATGACACACCGAGTAAGGGTCGCAATTACTGCTAGGTCTTCTGTCTTCCAAATAGCCTTTCTTTTCTTCAGCAACTCCACGAGGAATGCGAATACTAACATTACGATTGGCCACACCAGCGCTGAAATCGTATATACTACTGGTCTCGCATTTTCCAGTCAGACGTCGCTCGTTGTCTTTTCCTCCGCGTGGATCATACGCTTGAATGTGCCTTAGGTGTTGTTTGCTCAATTTATCAATTGCTTTCTCAATTT ]
[-] EMBL BI504682 [TTTTTTTTCTTTTTTACATTTTTAATTTTAGAAATAATTTTATACATTTTCATAGAATATGCTTCACGAAGGTACGATCACTATTGCACTACAAAATTTTTCGTCCAATTTCTCCTTTCCGCTGCCTGTTTGGAAATAACTTGAAGTTTTTTTTTTTATTCATTTAGGACACAAGTGCGCACCAAAGCATGACACACCGAGTAAGGGTCGCAATTACTGCTAGGTCTTCTGTCTTCCAAATAGCCTTTCTTTTCTTCAGCAACTCCACGAGGAATGCGAATACTAACATTACGATTGGCCACACCAGCGCTGAAATCGTATATACTACTGGTCTCGCATTTTCCAGTCAGACGTCGCTCGTTGTCTTTTCCTCCGCGTGGATCATACGCTTGAATGTGCCTTAGGTGTTGTTTGCTCAATTTATCAATTGCTTTCTCAATTT ]
[+] EMBL BI509050 [ GCTGCCTGTTTGGAAATAACTTGAAGTTTTTTTTTTTATTCATTTAGGACACAAGTGCGCACCAAAGCATGACACACCGAGTAAGGGTCGCAATTACTGCTAGGTCTTCTGTCTTCCAAATAGCCTTTCTTTTCTTCAGCAACTCCACGAGGAATGCGAATACTAACATTACGATT TCAGCGCTGGTGTGGc ]
[+] EMBL BI946532 [ TATATACTACTGGTCTCGCATTTTCCAGTCAGACGTCGCTCGTTGTCTTTTCCTCCGCGTGGATCATACGCTTGAATGTGCCTTAGGTGTTGTTTGCTCAATTTATCAATTGCTTTCTCAATTTCGGCAATGCCATTTTCGGCACGCATCGATTTTGTCGAGAAGTTTGTATGTGCACCTGCACCATTCCACGAACCATCCATAATTTTCGGGTCTAAACTAACAACCACACCAAACTCCTCAGCTACACGATGAAGAATAAATCTAGCAATCCATAAGTCGTCTCCGGCAGATATTCCGCTACACGGGCCGACTTGGAATTCCCATTGTGAGGGCATAACTTCTGCATTAGTACCGGCAATTTTTACGCCAGCATAAAGACAAGCTCGATAATGAGCCTCGACAATTTCGCGACCAATTACTTTGTCGGCGCCTACACCACAATAATAAGGTCCTTGCGGCTTAGGGAAACCATTTTTTGGCCAACCAAGTGGTCTACCATCAAAATCAAGGGAAAGTATATTTCTTGTTCAATTCCGAACCCATGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTACATTTGGGAACCGTTGGTTGGATGAGTTCGGGGTCATGT ]
[-] EMBL BI512118 [ ATTTTTACGCCAGCATAAAGACAAGCTCGATAATGAGCCTCGACAATTTCGCGACCAATTACTTTGTCGGCGCCTACACCACAATAATAAGGTCCTTGCGGCTTAGGGAAACCATTTTTTGGCCAACCAAGTGGTCTACCATCAAAATCAA GGAAAGTATA TTCTTGTTCAATTCCGAA CCATGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTACATTTGG AACGTTTGTTGGATGTAGTCGGGGTCATGTCACTGTAGTAGGTATCACATAATACTAATTTGTTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCACTGGACAAAGGAAAATATCGCTGTTTGCGCCATCTGCTTGATAAGTTGAACTACCGTCGAAGGTCCATATTGGTAAATCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGTTTGATCGATGGCTGTG]
consensusID : consensus_59#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 515 fasta sequence
[GAAAGTATATTCTTGTTCAATTCCGAACCATGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTACATTTGGAACGTTTGTTGGATGTAGTCGGGGTCATGTCACTGTAGTAGGTATCACATAATACTAATTTGTTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCACTGGACAAAGGAAAATATCGCTGTTTGCGCCATCTGCTTGATAAGTTGAACTACCGTCGAAGGTCCATATTGGTAAATCTGATGGATGTTTTGGTACGAAATCTACCGTCCTAGTCTTGCTTCGCAAGCTTTCACCGGTACCATCAATCCAGATGTATTTCGCTTGAATTTTATTTTCCGGTTGAGGCAGGTCGAGGTATTTATTTAACAAGGTTTTGTCTAAGGCCGCATTCGGCGATTCCCTCAGTATGACACGTGACATTGTAATGCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGTTTGATCGATGGCTGTGGAG]
[-] EMBL BI515790 [GAAAGTATATTCTTGTTCAATTCCGAACCATGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTACATTTGGAACGTTTGTTGGATGTAGTCGGGGTCATGTCACTGTAGTAGGTATCACATAATACTAATTTGTTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCACTGGACAAAGGAAAATATCGCTGTTTGCGCCATCTGCTTGATAAGTTGAACTACCGTCGAAGGTCCATATTGGTAAATCTGATGGATGTTTTGGTACGAAATCTACCGTCCTAGTCTTGCTTCGCAAGCTTTCACCGGTACCATCAATCCAGATGTATTTCGCTTGAATTTTATTTTCCGGTTGAGGCAGGTCGAGGTATTTATTTAACAAGGTTTTGTCTAAGGCCGCATTCGGCGATTCCCTCAGTATGACACGTGACATTGTAATGCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGTT ]
[-] EMBL BI511044 [GAAAGTATATTCTTGTTCAATTCCGAACCATGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTACATTTGGAACGTTTGTTGGATGTAGTCGGGGTCATGTCACTGTAGTAGGTATCACATAATACTAATTTGTTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCACTGGACAAAGGAAAATATCGCTGTTTGCGCCATCTGCTTGAT ]
[-] EMBL BI512901 [ CCATAGCCTGATTACATTTGGAACGTTTGTTGGATGTAGTCGGGGTCATGTCACTGTAGTAGGTATCACATAATACTAATTTGTTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCANTGGACAAAGGAAAATATCGCTGTTTGCGCCATCTGCTTGATAAGTTGAACTACCGTCGAAGGTCCATATTGGTAAATCTGATGGATGTTTTGGTACGAAATCTACCGTCCTAGTCTTGCTTCGCAAGCTTTCACCGGTACCATCAATCCAGATGTATTTCGCTTGAATTTTATTTTCCGGTTGAGGCAGGTCGAGGTATTTATTTAACAAGGTTTTGTCTAAGGCCGCATTCGGCGATTCCCTCAGTATGACACGTGACATTGTAATGCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGTTTGATCGATGGCTGTGGAG]
[-] EMBL BI516977 [ TGGACAAAGGAAAATATCGCTGTTTGCGCCATCTGCTTGATAAGTTGAACTACCGTCGAAGGTCCATATTGGTAAATCTGATGGATGTTTTGGTACGAAATCTACCGTCCTAGTCTTGCTTCGCAAGCTTTCACCGGTACCATCAATCCAGATGTATTTCGCTTGAATTTTATTTTCCGGTTGAGGCAGGTCGAGGTATTTATTTAACAAGGTTTTGTCTAAGGCCGCATTCGGCGATTCCCTCAGTATGACACGTGACATTGTAATGCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGTTTGAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_59#0 TTTTTTTTCTTTTTTACATTTTTAATTTTAGAAATAATTTTATACATTTTCATAGAATAT 60
consensus_59#1 ------------------------------------------------------------
consensus_59#0 GCTTCACGAAGGTACGATCACTATTGCACTACAAAATTTTTCGTCCAATTTCTCCTTTCC 120
consensus_59#1 ------------------------------------------------------------
consensus_59#0 GCTGCCTGTTTGGAAATAACTTGAAGTTTTTTTTTTTATTCATTTAGGACACAAGTGCGC 180
consensus_59#1 ------------------------------------------------------------
consensus_59#0 ACCAAAGCATGACACACCGAGTAAGGGTCGCAATTACTGCTAGGTCTTCTGTCTTCCAAA 240
consensus_59#1 ------------------------------------------------------------
consensus_59#0 TAGCCTTTCTTTTCTTCAGCAACTCCACGAGGAATGCGAATACTAACATTACGATTGGCC 300
consensus_59#1 ------------------------------------------------------------
consensus_59#0 ACACCAGCGCTGAAATCGTATATACTACTGGTCTCGCATTTTCCAGTCAGACGTCGCTCG 360
consensus_59#1 ------------------------------------------------------------
consensus_59#0 TTGTCTTTTCCTCCGCGTGGATCATACGCTTGAATGTGCCTTAGGTGTTGTTTGCTCAAT 420
consensus_59#1 ------------------------------------------------------------
consensus_59#0 TTATCAATTGCTTTCTCAATTTCGGCAATGCCATTTTCGGCACGCATCGATTTTGTCGAG 480
consensus_59#1 ------------------------------------------------------------
consensus_59#0 AAGTTTGTATGTGCACCTGCACCATTCCACGAACCATCCATAATTTTCGGGTCTAAACTA 540
consensus_59#1 ------------------------------------------------------------
consensus_59#0 ACAACCACACCAAACTCCTCAGCTACACGATGAAGAATAAATCTAGCAATCCATAAGTCG 600
consensus_59#1 ------------------------------------GAAAGTATATTCTTGTTCAATTCC 24
** * ** * ** **
consensus_59#0 TCTCCGGCAGATATTCCGCTACACGGGCCGACTTGGAATTCCCATTGTGAGGGCATAACT 660
consensus_59#1 GAACCA-TGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTACATTTGGAACGT--TT 81
** *** *** ** ** * * * * * * * * * *
consensus_59#0 TCTGCATTAGTACCGGCAATTTTTACGCCAGCATAAAGACAAGCTCGATAATGAGCCTCG 720
consensus_59#1 GTTGGAT--GTAGTCGGGGTCATGTCACTGTAGTAGGTATCA-CATAATACTAA--TTTG 136
** ** *** * * * * * ** * * * *** * * * *
consensus_59#0 ACAATTTCGCGACCAATTACTTTGTCGGCGCCTAC-ACCACAATAATAAGGTCCTTGCGG 779
consensus_59#1 TTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCACTGGACAAAGGAAAATATCGCTG 196
* ** * **** ** * ** * * * ** * ** * * ** *
consensus_59#0 CTTAGGGAAACCATTTTTTGGCCAACCAAGTGGTCTACCATCAAAATCAAGGGAAAGTAT 839
consensus_59#1 TTTG-------CGCCATCTGCTTGATAAGTTGAACTACCGTC----------GAAGGTCC 239
** * * ** * * ** ***** ** *** **
consensus_59#0 ATTCTTGTTCAATTCCGAACCCATGGATCTTCATCTTTTATAGCTTCCATAGCCTGATTA 899
consensus_59#1 ATATTGGT--AAATCTGA-----TGGATGTTTTGGTACGAAATCTACCGT--CCTAGTCT 290
** * ** ** ** ** ***** ** * * * ** ** * *** *
consensus_59#0 CATTTGGGAAACGTTGGTTGGATGAGGTCGGGGTCATGTCACTGTAGTAGGTATCACATA 959
consensus_59#1 TGCTTCGCAAGCTTTCACCGG------------TACCATCAATCCAG-ATGTATTTCGC- 336
** * ** * ** ** * *** * ** * **** *
consensus_59#0 ATACTAATTTGTTATTTCCACGACGAAAGGGGTCGTTGTAAATTGCCACTGGACAAAGGA 1019
consensus_59#1 ---TTGAATT-TTATTTTCCGGTTGAGGCAGGTCG----AGGTATTTATTTAACAAGG-- 386
* * ** ****** * * ** ***** * * * * **** *
consensus_59#0 AAATATCGCTGTTTGCGCCATCTGCTTGATAAGTTGAACTACCGTCGAAGGTCCATATTG 1079
consensus_59#1 ------TTTTGTCTAAGGCCGC-ATTCGGCGA-TTCCCTCAGTATGACACGTG-ACATTG 437
*** * * * * * * * ** * * * ** * ****
consensus_59#0 GTAAATCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGT 1139
consensus_59#1 -TAATGCGCTATTATTGCCGGTCCAGCAATCGTGGAGAGTGTGATGTTCTAGATGATCGT 496
*** ******************************************************
consensus_59#0 TTGATCGATGGCTGTG--- 1155
consensus_59#1 TTGATCGATGGCTGTGGAG 515
****************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |