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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_637#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1223 fasta sequence
[TTAGCCGTTCCGGCATATGAGTCGTCGTTCACGCGACTGGGCCGTGTTTCACAATAATCTCTCGTGTAATCTCTCGTGTATTCGATAACTAATTGTTTTTTATTAGTGCGATTATCTCATTATCTCATGGTGTGATCGTTGACTGAAACCACTCAAAGTTCACTCGACCATTGAACTTTGATTATTACGATATTTTTTTTCCTCCCGGATTTAACGACAATTTAAGCGATTGTATACATATATTTTTTCATGAAAAAAAAAAAAAAGAAAACACTTCTCACTCGTCCCTTCATTCTTTTCGCCTGTTACAGAAGAATAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGTGCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTTACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACTTTGTATATAGTGTAAATATCGCTTTTCTAACAAAGGATCTCGCTCAAATAAAAGAAAAAAAAAAAAAAAAAACGAGCAAGCTCGAAGAATCGAAACAAGTCACGCGGGGATTTCAAGGAGTCGAGAGAATTCGAAAGATTGCACTATTCCAAACCCCATATATAATATCCGACGCATGCATCAACCTAGAACGCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATAAAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGATGAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGCAGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGATTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGATGGCTCCATGCTCGCGATGCGAAATACGCAACCAGGATTATGGAGGACAGTAAAGAACATCGTCAGACTCGAAGGAGCAAGGTACGTTATTCATGATCCTATAGTAAATTTAAGAACAAGGGGTAGGTAAAAACCGATTACATTATTGTACATAAATATAATTAGCGTATACATATATATACATATTTCTTCCGATTCGAATCAAAGTTTATATACACAGCGGGCACTTTTTCGTGCCCGCTCGAAATATGATAATTATTTGATTACGTAATTCACTTCAACTTGAA]
[-] EMBL BI509202 [TTAGCCGTTCCGGCATATGAGTCGTCGTTCACGCGACTGGGCCGTGTTTCACAATAATCTCTCGTGTAATCTCTCGTGTATTCGATAACTAATTGTTTTTTATTAGTGCGATTATCTCATTATCTCATGGTGTGATCGTTGACTGAAACCACTCAAAGTTCACTCGACCATTGAACTTTGATTATTACGATATTTTTTTTCCTCCCGGATTTAACGACAATTTAAGCGATTGTATACATATATTTTTTCATGAAAAAAAAAAAAAAGAAAACACTTCTCACTCGTCCCTTCATTCTTTTCGCCTGTTACAGAAGAATAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGTGCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTTACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACTTTGTATATAGTGTAAAT ]
[+] EMBL BE844284 [ TAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGTGCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTTACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACTTTGTATATAGTGTAAATATCGCTTTTCTAACAAAGGATCTCGCTCAAATAAAAGAAAAAAAAAAAAAAAAAACGAGCAAGCTCGAAGAATCGAAACAAGTCACGCGGGGATTTCAAGGAGTCGAGAGAATTCGAAAGATTGCACTATTCCAAACCCCATATATAATATCCGACGCATGCATCAACCTAGAACGCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATAAAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGATGAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGCAGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGATTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGAT ]
[+] EMBL BI505193 [ AGAACGCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATAAAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGATGAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGCAGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGATTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGATGGCTCCATGCTCGCGATGCGAAATACGCAACCAGGATTATGGAGGACAGTAAAGAACATCGTCAGACTCGAAGGAGCAAGGTACGTTATTCATGATCCTATAGTAAATTTAAGAACAAGGGGTAGGTAAAAACCGATTACATTATTGTACATAAATATAATTAGCGTATACATATATATACATATTTCTTCCGATTCGAATCAAAGTTTATATACACAGCGGGCACTTTTTCGTGCCCGCTCGAAATATGATAATTATTTGATTACGTAATTCACTTCAACTTGAA]
consensusID : consensus_637#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence
[AGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGGTAAATATAATGCATGTTTAATTTATCGATAAGCTTTTGTTCTTACAAATAAAAATTTTCAAAGTCTAGAGATCTAGAGAAAATGTTACTTATTGCAACTTAAGATATAAAGTTTAAATATCTCATTCAATATTTAGTATAAATTTCNNNTTTTTATTTACAGTGTGCTTGCATAATTACAACTTCTTTTTAATTTTTCTTAGGCTATAATATATTATGAAACAATGCAAAATCATGTATTTCATATTAATTTTTAAAATTCATGTTTGATTATACGTATTAATCATCTTGATATCCTTTCTTAGAAAATTTCCATTGTTTCTTACACACGATTAATATTATCATAAATAATTGTATCGCGTAATCAATAAAGTCAATTCTTTTTCATACTTGATTTACTCGATTTCCATTTGAATTCGTTACATCTTTTCAGGATTCAGAGTGGGGATTCAAGGATGTTTGTACAAATATTCTACATGCTTTTTTCCTCTACATAATATTTATACATTGTAATTGGGAAAGAGATGCTTCTTATTACTTAAAATGTTATACTCGCGCAAAATATAA]
[+] EMBL BI504457 [AGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGGTAAATATAATGCATGTTTAATTTATCGATAAGCTTTTGTTCTTACAAATAAAAATTTTCAAAGTCTAGAGATCTAGAGAAAATGTTACTTATTGCAACTTAAGATATAAAGTTTAAATATCTCATTCAATATTTAGTATAAATTTCNNNTTTTTATTTACAGTGTGCTTGCATAATTACAACTTCTTTTTAATTTTTCTTAGGCTATAATATATTATGAAACAATGCAAAATCATGTATTTCATATTAATTTTTAAAATTCATGTTTGATTATACGTATTAATCATCTTGATATCCTTTCTTAGAAAATTTCCATTGTTTCTTACACACGATTAATATTATCATAAATAATTGTATCGCGTAATCAATAAAGTCAATTCTTTTTCATACTTGATTTACTCGATTTCCATTTGAATTCGTTACATCTTTTCAGGATTCAGAGTGGGGATTCAAGGATGTTTGTACAAATATTCTACATGCTTTTTTCCTCTACATAATATTTATACATTGTAATTGGGAAAGAGATGCTTCTTATTACTTAAAATGTTATACTCGCGCAAAATATAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_637#0 TTAGCCGTTCCGGCATATGAGTCGTCGTTCACGCGACTGGGCCGTGTTTCACAATAATCT 60
consensus_637#1 ------------------------------------------------------------
consensus_637#0 CTCGTGTAATCTCTCGTGTATTCGATAACTAATTGTTTTTTATTAGTGCGATTATCTCAT 120
consensus_637#1 ------------------------------------------------------------
consensus_637#0 TATCTCATGGTGTGATCGTTGACTGAAACCACTCAAAGTTCACTCGACCATTGAACTTTG 180
consensus_637#1 ------------------------------------------------------------
consensus_637#0 ATTATTACGATATTTTTTTTCCTCCCGGATTTAACGACAATTTAAGCGATTGTATACATA 240
consensus_637#1 ------------------------------------------------------------
consensus_637#0 TATTTTTTCATGAAAAAAAAAAAAAAGAAAACACTTCTCACTCGTCCCTTCATTCTTTTC 300
consensus_637#1 ------------------------------------------------------------
consensus_637#0 GCCTGTTACAGAAGAATAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGT 360
consensus_637#1 ------------------------------------------------------------
consensus_637#0 GCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTT 420
consensus_637#1 ------------------------------------------------------------
consensus_637#0 ACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACT 480
consensus_637#1 ------------------------------------------------------------
consensus_637#0 TTGTATATAGTGTAAATATCGCTTTTCTAACAAAGGATCTCGCTCAAATAAAAGAAAAAA 540
consensus_637#1 --------------AGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGGTAAAT 46
* ** ** * * * * *** * ** ***
consensus_637#0 AAAAAAAAAAAACGAGCAAGCTCGAAGAATCGAAACAAGTCACGCGGGGATTTCAAGGAG 600
consensus_637#1 ATAATGCATGTTTAATTTATCGATAAGCTTTTGTTCTTACAAATAAAAATTTTCAA--AG 104
* ** * * * * *** * * * ****** **
consensus_637#0 TCGAGAGAATTCGAAAGATTGC-ACTATTCCAAACCCCATATATAATATCCGACGCATGC 659
consensus_637#1 TCTAGAGATCTAGAGAAAATGTTACTTATTGCAACTTAAGATATAAAGTTTAA---ATAT 161
** ***** * ** * * ** *** * *** * ****** * * **
consensus_637#0 ATCAACCTAGAAC--GCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATA 717
consensus_637#1 CTCATTCAATATTTAGTATAAATTTCNNNTTTTTATTTACAGTGTGCTTGCATAATTACA 221
*** * * * * * * * * ** ** ** * * * *
consensus_637#0 AAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGAT 777
consensus_637#1 ACTTCTTTTTAATTTTTCTTAGGCTATAATATATTATGAAACAATGCAAAATCATGT-AT 280
* * ** ** ** * ** * * ** * * * * ** **
consensus_637#0 GAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGC 837
consensus_637#1 TTCATATTAATTTTTAAAA----TTCATGTTTGATTATACGTATTAATCAT---CTTGAT 333
* ** * ** * * * * ** ** * ** * * *
consensus_637#0 AGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCA-GA 896
consensus_637#1 ATCCTTTCTTAGAAAATTTCCATTGTTTC--TTACACACGATTAATATTATCATAAATAA 391
* *** * * * ** * ***** ** **** ** * * ** * *
consensus_637#0 TTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGATGGCTC-CATGCTCGCGATG 955
consensus_637#1 TTGTATCGCGTAATCAATAAAGTCAATTCTTTTTCATACTTGATTTACTCGATTTCCATT 451
*** * ** ** *** * ** * * * * * **
consensus_637#0 CGAAATACGCAACCAGGATTATGGAGGACAGTAAAGAACATCGTCAGACTCGAAGGAGCA 1015
consensus_637#1 TGAATT-CGTTACATCTTTTCAGGATTCAGAGTGGGGATTCAAGGATGTTTGTACAAATA 510
*** * ** ** ** *** * * * * * * * *
consensus_637#0 AGGTACGTTATTCATGATCCTATAGTAAATTTAAGAACAAGGGGTAGGTAAAAACCGATT 1075
consensus_637#1 TTCTACATGCTTTTTTCCTCTACATAATATTTATACATTGTAATTGGGAAAGAGATGCTT 570
*** * ** * *** * * ***** * * ** ** * * **
consensus_637#0 ACATTATTGTACATAAATATAATTAGCGTATACATATATATACATATTTCTTCCGATTCG 1135
consensus_637#1 C--TTATTACTTA-AAATGTTATACTCGCGCA-AAATATAA------------------- 607
***** * **** * ** ** * * *****
consensus_637#0 AATCAAAGTTTATATACACAGCGGGCACTTTTTCGTGCCCGCTCGAAATATGATAATTAT 1195
consensus_637#1 ------------------------------------------------------------
consensus_637#0 TTGATTACGTAATTCACTTCAACTTGAA 1223
consensus_637#1 ----------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |