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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_639#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 582 fasta sequence
[TTTTTTTTTTTTTTTTTGATTGCACTNGCGGACCGCTTTCGTTTCTTCTTCTCTGGAGCGGATGTTGTGTCCGGAGCTGGACTTGGGGTTCGTACTNNNTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCTCCGGATCTAGGCTACTTCCCTCCACGANNNATTCCGATATGCCAAATGCTTCGCGTAGCTTTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGGGGGTCTCTCGTANNNTAAAAGAAAAAAATACACATTGCATGTCATTCACACAAATTAAGTTTAAGTTCAAGGGATTAATGATAAAAATTAATAATAAAGATTCTTGGATCATTAATCAATCTTAATAAACAAATCAAATTATGAAAGAAACATTTATCGGATATTAAAAATCCTTCGTATATAATGATCGTCATATAACAACATCGAAACTCTATCTAGTAAACCATATGCAAAGAACACATTGACCCCGTGCATCGAATACACTAAACTCACACATAGACCTAGAAACACGTGGCCATCGAACACGAAATGTTGTTCGAAAATCATGTAAGAAT]
[+] EMBL BI516095 [TTTTTTTTTTTTTTTTTGATTGCACTNGCGGACCGCTTTCGTTTCTTCTTCTCTGGAGCGGATGTTGTGTCCGGAGCTGGACTTGGGGTTCGTACTNNNTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCTCCGGATCTAGGCTACTTCCCTCCACGANNNATTCCGATATGCCAAATGCTTCGCGTAGCTTTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGGGGGTCTCTCGTANNNTAAAAGAAAAAAATACCCATTGCATGTCATTCACACAAATTAAGTTTAAGTTCAAGGGATTAATGATAAAAATTAATAATAAAGATTCTTGGATCATTAATCAATCTTAATAAACAAATCAAATTATGAAAGAAACATTTATCG ]
[+] EMBL BI513175 [ ACTAGCGGACCGCTTTCGTTTCTTCTTCTCTGGAGCGGATGTTGTGTCCGGAGCTGGACTTGGTGTTCGTACTAGTTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCTCCGGATCTAGGCTACTTCCCTCCACGAAGAATTCCGATATGCCAAATGCTTCGCGTAGCTTTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGTGTGTCTCTCGTACACTAAAAGAAAAAAATACACATTGCATGTCATTCACACAAATTAAGTTTAAGTTCAAGTGATTAATGATAAAAATTAATAATAAAGATTCTTGGATCATTAATCAATCTTAATAAACAAATCAAATTATGAAAGAAACATTTATCGGATATTAAAAATCCTTCGTATATAATGATCGTCATATAACAACATCGAAACTCTATCTAGTAAACCATATGCAAAGAACACATTGACCCCGTGCATCGAATACACTAAACTCACACATAGACCTAGAAACACGTGGCCATCGAACACGAAATGTTGTTCGAAAATCATGTAAGAAT]
consensusID : consensus_639#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence
[CCTCCTCAGTTCTTTCCTTCTTGTGCTTCTTTCCCTTTTTTTTTTTGATTGCACTAGCGGACCGCTTTCGTTTCTTCTTCTCTGGAGCGGATGTTGTGTCCGGAGCTGGACTTGGTGTTCGTACTAGTTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCTCCGGATCTAGGCTACTTCCCTCCACGAAGAATTCCGATATGCCAAATGCTTCGCGTAGCTTTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGTGTGTCTCTCGTACACGCGTCGAGATTTTCACCGTCATTGTAGCGCGGTATCGGAACACCTCGATAACCGCTTAATTACTGCCGAATTTCGCGATGATCCATAGAGCGTGTAATGAAATCCGGCAAAGAGGCGTTGCGGAGATGGTGGGCAGCGTGTTCTTCGATGTAGCGGTGGCGAACTT]
[-] EMBL BI515392 [CCTCCTCAGTTCTTTCCTTCTTGTGCTTCTTTCCCTTTTTTTTTTTGATTGCACTAGCGGACCGCTTTCGTTTCTTCTTCTCTGGAGCGGATGTTGTGTCCGGAGCTGGACTTGGTGTTCGTACTAGTTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCTCCGGATCTAGGCTACTTCCCTCCACGAAGAATTCCGATATGCCAAATGCTTCGCGTAGCTTTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGTGTGTCTCTCGTACACGCGTCGAGATTTTCACCGTCATTGTAGCGCGGTATCGGAACACCTCGATAACCGCTTAATTACTGCCGAATTTCGCGATGATCCATAGAGCGTGTAATGAAATCCGGCAAAGAGGCGTTGCGGAGATGGTGGGCAGCGTGTTCTTCGATGTAGCGGTGGCGAACTT]
consensusID : consensus_639#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 369 fasta sequence
[ACTTGGTGTTCGTACTAGTTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCTCCGGATCTAGGCTACTTCCCTCCACGAAGAATTCCGATATGCCAAATGCTTCGCGTAGCTTTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGTGTGTCTCTCGTACACTGACGACGGAGCGCATGTTGCTTCGCCGTCCGGCGAGGAGGTGGAGTTGTATGCGCTGACAACAGCAACAATGCTGTCGCATCTGCAGTTGTGCACGCTTCTTTCCATTCGCTGTTTGCAATTTTCGTTTTCGCGATCGTTTCATTACTTTCTGCCTATCCAGAAAAAAATTTCCTCTCCACAACGT]
[+] EMBL BI506348 [ACTTGGTGTTCGTACTAGTTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCTCCGGATCTAGGCTACTTCCCTCCACGAAGAATTCCGATATGCCAAATGCTTCGCGTAGCTTTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGTGTGTCTCTCGTACACTGACGACGGAGCGCATGTTGCTTCGCCGTCCGGCGAGGAGGTGGAGTTGTATGCGCTGACAACAGCAACAATGCTGTCGCATCTGCAGTTGTGCACGCTTCTTTCCATTCGCTGTTTGCAATTTTCGTTTTCGCGATCGTTTCATTACTTTCTGCCTATCCAGAAAAAAATTTCCTCTCCACAACGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_639#0 -----------------------------TTTTTTTTTTTTTTTTTGATTGCACTNGCGG 31
consensus_639#1 CCTCCTCAGTTCTTTCCTTCTTGTGCTTCTTTCCCTTTTTTTTTTTGATTGCACTAGCGG 60
consensus_639#2 ------------------------------------------------------------
consensus_639#0 ACCGCTTTCGTTTCTTCTTCTCTGGAGCGGATGTTGTGTCCGGAGCTGGACTTGGGGTTC 91
consensus_639#1 ACCGCTTTCGTTTCTTCTTCTCTGGAGCGGATGTTGTGTCCGGAGCTGGACTTGGTGTTC 120
consensus_639#2 -------------------------------------------------ACTTGGTGTTC 11
****** ****
consensus_639#0 GTACTNNNTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCT 151
consensus_639#1 GTACTAGTTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCT 180
consensus_639#2 GTACTAGTTCATACACTTTGCTCGCTGCTGCTCTTGCTTCAGCCTCGCGCGCGTGCCTCT 71
***** ****************************************************
consensus_639#0 CCGGATCTAGGCTACTTCCCTCCACGANNNATTCCGATATGCCAAATGCTTCGCGTAGCT 211
consensus_639#1 CCGGATCTAGGCTACTTCCCTCCACGAAGAATTCCGATATGCCAAATGCTTCGCGTAGCT 240
consensus_639#2 CCGGATCTAGGCTACTTCCCTCCACGAAGAATTCCGATATGCCAAATGCTTCGCGTAGCT 131
*************************** ******************************
consensus_639#0 TTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGGGGGTCTCTCGTANNNTAAAAGAAA 271
consensus_639#1 TTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGTGTGTCTCTCGTACACGCGTCGAGA 300
consensus_639#2 TTGCATTTTTTTCTTGTTGCGCTTCGGCAATCTGGTGTGTCTCTCGTACACTGACGACGG 191
*********************************** * **********
consensus_639#0 AAAATACACA-TTGCATGTCATTCACACAAATTAAGTTTAAGTTCAAGGG-ATTAATGAT 329
consensus_639#1 TTTTCACCGT-CATTGTAGCGCGGTATCGGAACACCTCGATAACCGCTTA-ATTACTGCC 358
consensus_639#2 AGCGCATGTTGCTTCGCCGTCCGGCGAGGAGGTGGAGTTGTATGCGCTGACAACAGCAAC 251
* * * *
consensus_639#0 AAAAATTAATAATAAAGATTCTTGGA-TCAT-TAATCAATCTTAATAAACAAATCAAATT 387
consensus_639#1 GAATTTC----GCGATGATCCATAGA-GCGTGTAATGAAATCCGGCAAAGAGGC---GTT 410
consensus_639#2 AATGCTGTCGCATCTGCAGTTGTGCACGCTTCTTTCCATTCGCTGTTTGCAATTTTCGTT 311
* * * * * * * * * * **
consensus_639#0 ATGAAAGAAACATTTATCGGATATTAAAAATCCTTCGTATATAATGATCGTCATATAACA 447
consensus_639#1 GCGGAGATGGTGGGCAGCGTG---------TTCTTCG-ATGTAGCGGTGGCGAACTT--- 457
consensus_639#2 TTCGCGATCGT-TTCATTACTTTCT-----GCCTATCCAGAAAAAAATTTCCTCTCCACA 365
* ** * * *
consensus_639#0 ACATCGAAACTCTATCTAGTAAACCATATGCAAAGAACACATTGACCCCGTGCATCGAAT 507
consensus_639#1 ------------------------------------------------------------
consensus_639#2 ACGT-------------------------------------------------------- 369
consensus_639#0 ACACTAAACTCACACATAGACCTAGAAACACGTGGCCATCGAACACGAAATGTTGTTCGA 567
consensus_639#1 ------------------------------------------------------------
consensus_639#2 ------------------------------------------------------------
consensus_639#0 AAATCATGTAAGAAT 582
consensus_639#1 ---------------
consensus_639#2 ---------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |