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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 541 fasta sequence
[GCTCGTCGATCGAGAAATAAGATCAAGCTTGACTAATTGTGATGATAATCTCGGACGAAGTTATTTATTTTGAGGATAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTAGTGAGATAAAAAAACTTAAGGGTGCTTTGAAATGTTTCAACGTTAAACGCGAATGTTTTTAATCACGATTTGATGATCGATGATGTTTAAGAAACGATCAGTTGATTCCTAGAAAGTAAATTTTGAGAGCTACATTATAAATAATTAAACACTTCGCGGGCAAACAAGCGCTAAATATTGAATATATATACGTATGACTATAAAAATAAGAAGATTCGTATCATCTTGAAAAATTTAAAGAACTGTCACCGAAGTGTTATGTCATATCCGCCCAAAAACCCGTCAATCCAATCAGAAAGTAATATCGTCGTACATGTTGAAAAATTTGAGAAATAAGTACTTTAAGATACTTTCTGAACTCATCGTTTCTTCGATCGATGAATCAAATGGATAAATAATCGATCAAATCGG]
[+] EMBL BI508223 [GCTCGTCGATCGAGAAATAAGATCAAGCTTGACTAATTGTGATGATAATCTCGGACGAAGTTATTTATTTTGAGGATAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTAGTGAGATAAAAAAACTTAAGGGTGCTTTGAAATGTTTCAACGTTAAACGCGAATGTTTTTAATCACGATTTGATGATCGATGATGTTTAAGAAACGATCAGTTGATTCCTAGAAAGTAAATTTTGAGAGCTACATTATAAATAATTAAACACTTCGCGGGCAAACAAGCGCTAAATATTGAATATATATACGTATGACTATAAAAATAAGAAGATTCGTATCATCTTGAAAAATTTAAAGAACTGTCACCGAAGTGTTATGTCATATCCGCCCAAAAACCCGTCAATCCAATCAGAAAGTAATATCGTCGTACATGTTGAAAAATTTGAGAAATAAGTACTTTAAGATACTTTCTGAACTCATCGTTTCTTCGATCGATGAATCAAATGGATAAATAATCGATCAA ]
[+] EMBL BI508729 [ AGCTTGACTAATTGTGATGATAATCTCGGACGAAGTTATTTATTTTGAGGATAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTAGTGAGATAAAAAAACTTAAGGGTGCTTTGAAATGTTTCAACGTTAAACGCGAATGTTTTTAATCACGATTTGATGATCGATGATGTTTAAGAAACGATCAGTTGATTCCTAGAAAGTAAATTTTGAGAGCTACATTATAAATAATTAAACACTTCGCGGGCAAACAAGCGCTAAATATTGAATATATATACGTATGACTATAAAAATAAGAAGATTCGTATCATCTTGAAAAATTTAAAGAACTGTCACCGAAGTGTTATGTCATATCCGCCCAAAAACCCGTCAATCCAATCAGAAAGTAATATCGTCGTACATGTTGAAAAATTTGAGAAATAAGTACTTTAAGATACTTTCTGAACTCATCGTTTCTTCGATCGATGAATCAAATGGATAAATAATCGATCAAATCGG]
consensusID : consensus_687#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 497 fasta sequence
[TCAAGCTTGACTAATTGTGATGATAATCTCGGACGAAGTTATTTATTTTGAGGATAAGGGGAGAGAGAGAGAGAGAGAGAGAGCTAGTGAGATAAAAAAACTTAAGGGTGCTTTGAAATGTTTCAACGTTAAACGCGAATGTTTTTAATCACGATTTGATGATCGATGATGTTTAAGAAACGATCAGTTGATTCCTAGAAAGTAAATTTTGAGAGCTACATTATAAATAATTAAACACTTCGCGGGCAAACAAGCGCTAAATATTGAATATATATACGTATGACTATAAAAATAAGAAGATTCGTATCATCTTGAAAAATTTAAAGAACTGTCACCGAAGTGTTATGTCATATCCGCCCAAAAACCCGTCAATCCAATCAGAAAGTAATATCGTCGTACATGTTGAAAAATTTGAGAAATAAGTACTTTAAGATACTTTCTGAACTCATCGTTTCTTCGATCGATGAATCAAATGGATAAATAATCGATCAAATCGG]
[+] EMBL BI507748 [TCAAGCTTGACTAATTGTGATGATAATCTCGGACGAAGTTATTTATTTTGAGGATAAGGGGAGAGAGAGAGAGAGAGAGAGAGCTAGTGAGATAAAAAAACTTAAGGGTGCTTTGAAATGTTTCAACGTTAAACGCGAATGTTTTTAATCACGATTTGATGATCGATGATGTTTAAGAAACGATCAGTTGATTCCTAGAAAGTAAATTTTGAGAGCTACATTATAAATAATTAAACACTTCGCGGGCAAACAAGCGCTAAATATTGAATATATATACGTATGACTATAAAAATAAGAAGATTCGTATCATCTTGAAAAATTTAAAGAACTGTCACCGAAGTGTTATGTCATATCCGCCCAAAAACCCGTCAATCCAATCAGAAAGTAATATCGTCGTACATGTTGAAAAATTTGAGAAATAAGTACTTTAAGATACTTTCTGAACTCATCGTTTCTTCGATCGATGAATCAAATGGATAAATAATCGATCAAATCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_687#0 GCTCGTCGATCGAGAAATAAGATCAAGCTTGACTAATTGTGATGATAATCTCGGACGAAG 60
consensus_687#1 ----------------------TCAAGCTTGACTAATTGTGATGATAATCTCGGACGAAG 38
**************************************
consensus_687#0 TTATTTATTTTGAGGATAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 120
consensus_687#1 TTATTTATTTTGAGGATAAGGGGAGAGAGAGAGAGAGAGAGAGAG--------------- 83
*********************************************
consensus_687#0 GAGAGAGCTAGTGAGATAAAAAAACTTAAGGGTGCTTTGAAATGTTTCAACGTTAAACGC 180
consensus_687#1 -------CTAGTGAGATAAAAAAACTTAAGGGTGCTTTGAAATGTTTCAACGTTAAACGC 136
*****************************************************
consensus_687#0 GAATGTTTTTAATCACGATTTGATGATCGATGATGTTTAAGAAACGATCAGTTGATTCCT 240
consensus_687#1 GAATGTTTTTAATCACGATTTGATGATCGATGATGTTTAAGAAACGATCAGTTGATTCCT 196
************************************************************
consensus_687#0 AGAAAGTAAATTTTGAGAGCTACATTATAAATAATTAAACACTTCGCGGGCAAACAAGCG 300
consensus_687#1 AGAAAGTAAATTTTGAGAGCTACATTATAAATAATTAAACACTTCGCGGGCAAACAAGCG 256
************************************************************
consensus_687#0 CTAAATATTGAATATATATACGTATGACTATAAAAATAAGAAGATTCGTATCATCTTGAA 360
consensus_687#1 CTAAATATTGAATATATATACGTATGACTATAAAAATAAGAAGATTCGTATCATCTTGAA 316
************************************************************
consensus_687#0 AAATTTAAAGAACTGTCACCGAAGTGTTATGTCATATCCGCCCAAAAACCCGTCAATCCA 420
consensus_687#1 AAATTTAAAGAACTGTCACCGAAGTGTTATGTCATATCCGCCCAAAAACCCGTCAATCCA 376
************************************************************
consensus_687#0 ATCAGAAAGTAATATCGTCGTACATGTTGAAAAATTTGAGAAATAAGTACTTTAAGATAC 480
consensus_687#1 ATCAGAAAGTAATATCGTCGTACATGTTGAAAAATTTGAGAAATAAGTACTTTAAGATAC 436
************************************************************
consensus_687#0 TTTCTGAACTCATCGTTTCTTCGATCGATGAATCAAATGGATAAATAATCGATCAAATCG 540
consensus_687#1 TTTCTGAACTCATCGTTTCTTCGATCGATGAATCAAATGGATAAATAATCGATCAAATCG 496
************************************************************
consensus_687#0 G 541
consensus_687#1 G 497
*
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |