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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_711#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 713 fasta sequence
[CGTAAGTTTATTGTAATGAATGGAAAGTCAGGTATAGTGTAAGCAGGAAAACTGTGGATTCGTATAGTCAGATACGGTATAGTAATAGATTTTCCAACAAAACATTGGGGCATATTTAATGTTGATATAAGGCATATTTATATATGTAAAAGCCCAATACAACTAAAAGGCGTACAACTCTACGCTATACCGTGTTGCTCTGGCATCTCTCACGNNCACCTATACCGACTCGGAGGGCGAAGACGGGGTGGAAGACGACCTTCAGGAGAATTCGAACACTCCCCAGGGGGCCGCCCCGCATAATGCCCAAGTCGGTCAGCCCCAGGCTTTCACCAGTCCCAAATCTGGCACATCAGCCTCAAATAGTCCCGTTGTTGCTCCCAACGTCGGTGGCAAGTCTAGTAACGATTTGTCGAACGCGCCCACCTTAGTAACAGATGTGACATCTAAGGTGCAGAGATTGGTTTCATACTTTTATGATTCAATAGTCTCCGATGACGAGGGAGTGGTACAGACACAGATCGATGGACAGCCTTTTGAAAATGGAAGGCCCTCCTCGATTATGGAATGCTCTCCCTGTTGTCAAGGAGAACAATTAGTTTCAGATAGCGAGGTGGACTCCTATGGCGTCACTATACCACCAGAGCCACCAGGGCAGTGTCCTGTGGAACTGCAGGAAAAAATAACAAAACTTTTTAGGAAAATGGAGAGCA]
[+] EMBL BI515037 [CGTAAGTTTATTGTAATGAATGGAAAGTCAGGTATAGTGTAAGCAGGAAAACTGTGGATTCGTATAGTCAGATACGGTATAGTAATAGATTTTCCAACAAAACATTGGGGCATATTTAATGTTGATATAAGGCATATTTATATATGTAAAAGCCCAATACAACTAAAAGGCGTACAACTCTACGCTATACCGTGTTGCTCTGGCATCTCTCACGNNCACCTATACCGACTCGGAGGGCGAAGACGGGGTGGAAGACGACCTTCAGGAGAATTCGAACACTCCCCAGGGGGCCGCCCCGCATAATGCCCAAGTCGGTCAGCCCCAGGCTTTCACCAGTCCCAAATCTGGCACATCAGCCTCAAATAGTCCCGTTGTTGCTCCCAACGTCGGTGGCAAGTCTAGTAACGATTTGTC ]
[+] EMBL BI506357 [ ATTGGGGCATATTTAATGTTGATATAAGGCATATTTATATATGTAAAAGCCCAATACAACTAAAAGGCGTACAACTCTACGCTATACCGTGTTGCTCTGGCATCTCTCACGGCCACCTATACCGACTCGGAGGGCGAAGACGGGGTGGAAGACGACCTTCAGGAGAATTCGAACACTCCCCAGGGGGCCGCCCCGCATAATGCCCAAGTCGGTCAGCCCCAGGCTTTCACCAGTCCCAAATCTGGCACATCAGCCTCAAATAGTCCCGTTGTTGCTCCCAACGTCGGTGGCAAGTCTAGTAACGATTTGTCGAACGCGCCCACCTTAGTAACAGATGTGACATCTAAGGTGCAGAGATTGGTTTCATACTTTTATGATTCAATAGTCTCCGATGACGAGGGAGTGGTACAGACACAGATCGATGGACAGCCTTTTGAAAATGGAAGGCCCTCCTCGATTATGGAATGCTCTCCCTGTTGTCAAGGAGAACAATTAGTTTCAGATAGCGAGGTGGACTCCTATGGCGTCACTATACCACCAGAGCCACCAGGGCAGTGTCCTGTGGAACTGCAGGAAAAAATAACAAAACTTTTTAGGAAAATGGAGAGCA]
consensusID : consensus_711#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[AACATTGGGGCATATTTAATGTTGATATAAGGCATATTTATATATGTAAAAGCCCAATACAACTAAAAGGCGTACAACTCTACGCTATACCGGTGAGTTCCAACACAAAATATTGCTTGGTAGTACGGCGGACACTCAAAGCCAACTAACCATGTCTGTACAAAGTGTTGCTCTGGCATCTCTCACGGCCACCTATACCGACTCGGAGGGCGAAGACGGGGTGGAAGACGACCTTCAGGAGAATTCGAACACTCCCCAGGGGGCCGCCCCGCATAATGCCCAAGTCGGTCAGCCCCAGGCTTTCACCAGTCCCAAATCTGGCACATCAGCCTCAAATAGTCCCGTTGTTGCTCCCAACGTCGGTGGCAAGTCTAGTAACGATTTGTCGAACGCGCCCACCTTAGTAACAGATGTGACATCTAAGGTGCAGAGATTGGTTTCATACTTTGATGATTCAATAGTCTCCGATGACGAGGGAGTGGTACAGACACAGATCGATGGACA]
[+] EMBL BI512427 [AACATTGGGGCATATTTAATGTTGATATAAGGCATATTTATATATGTAAAAGCCCAATACAACTAAAAGGCGTACAACTCTACGCTATACCGGTGAGTTCCAACACAAAATATTGCTTGGTAGTACGGCGGACACTCAAAGCCAACTAACCATGTCTGTACAAAGTGTTGCTCTGGCATCTCTCACGGCCACCTATACCGACTCGGAGGGCGAAGACGGGGTGGAAGACGACCTTCAGGAGAATTCGAACACTCCCCAGGGGGCCGCCCCGCATAATGCCCAAGTCGGTCAGCCCCAGGCTTTCACCAGTCCCAAATCTGGCACATCAGCCTCAAATAGTCCCGTTGTTGCTCCCAACGTCGGTGGCAAGTCTAGTAACGATTTGTCGAACGCGCCCACCTTAGTAACAGATGTGACATCTAAGGTGCAGAGATTGGTTTCATACTTTGATGATTCAATAGTCTCCGATGACGAGGGAGTGGTACAGACACAGATCGATGGACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_711#0 CGTAAGTTTATTGTAATGAATGGAAAGTCAGGTATAGTGTAAGCAGGAAAACTGTGGATT 60
consensus_711#1 ------------------AACATTGGGGCATATTTAATGTTGATATAAGGCATATTTATA 42
** * ** * ** *** * * * * **
consensus_711#0 CGTATAGTCAGATACGGTATAGTAATAGATTTTCCAACAAAACATTGGGGCATATTTAAT 120
consensus_711#1 TATGTAA--AAGCCCAATACAACTAAAAGGCGTACAACTCTACGCTATACCGG--TGAGT 98
* ** * * ** * * * * **** ** * * * * *
consensus_711#0 GTTGATATAAGGCATATTTATATATGTAAAAGCCCAATACA-ACTAAAAGGCGTACAACT 179
consensus_711#1 TCCAACACAAAATAT-------TGCTTGGTAGTACGGCGGACACTCAAAGCCAACTAACC 151
* * ** ** * * ** * * *** **** * ***
consensus_711#0 CTACGC-TATACCGTGTTGCTCTGGCATCTCTCACGNNCACCTATACCGACTCGGAGGGC 238
consensus_711#1 ATGTCTGTACAAAGTGTTGCTCTGGCATCTCTCACGGCCACCTATACCGACTCGGAGGGC 211
* ** * *********************** **********************
consensus_711#0 GAAGACGGGGTGGAAGACGACCTTCAGGAGAATTCGAACACTCCCCAGGGGGCCGCCCCG 298
consensus_711#1 GAAGACGGGGTGGAAGACGACCTTCAGGAGAATTCGAACACTCCCCAGGGGGCCGCCCCG 271
************************************************************
consensus_711#0 CATAATGCCCAAGTCGGTCAGCCCCAGGCTTTCACCAGTCCCAAATCTGGCACATCAGCC 358
consensus_711#1 CATAATGCCCAAGTCGGTCAGCCCCAGGCTTTCACCAGTCCCAAATCTGGCACATCAGCC 331
************************************************************
consensus_711#0 TCAAATAGTCCCGTTGTTGCTCCCAACGTCGGTGGCAAGTCTAGTAACGATTTGTCGAAC 418
consensus_711#1 TCAAATAGTCCCGTTGTTGCTCCCAACGTCGGTGGCAAGTCTAGTAACGATTTGTCGAAC 391
************************************************************
consensus_711#0 GCGCCCACCTTAGTAACAGATGTGACATCTAAGGTGCAGAGATTGGTTTCATACTTTTAT 478
consensus_711#1 GCGCCCACCTTAGTAACAGATGTGACATCTAAGGTGCAGAGATTGGTTTCATACTTTGAT 451
********************************************************* **
consensus_711#0 GATTCAATAGTCTCCGATGACGAGGGAGTGGTACAGACACAGATCGATGGACAGCCTTTT 538
consensus_711#1 GATTCAATAGTCTCCGATGACGAGGGAGTGGTACAGACACAGATCGATGGACA------- 504
*****************************************************
consensus_711#0 GAAAATGGAAGGCCCTCCTCGATTATGGAATGCTCTCCCTGTTGTCAAGGAGAACAATTA 598
consensus_711#1 ------------------------------------------------------------
consensus_711#0 GTTTCAGATAGCGAGGTGGACTCCTATGGCGTCACTATACCACCAGAGCCACCAGGGCAG 658
consensus_711#1 ------------------------------------------------------------
consensus_711#0 TGTCCTGTGGAACTGCAGGAAAAAATAACAAAACTTTTTAGGAAAATGGAGAGCA 713
consensus_711#1 -------------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |