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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_715#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 609 fasta sequence
[CATCGAAATTACTTGTTCTCAAGAGCCGAAGAATCGAGTAACGTGCGTTCAATAAGAAGAATCATTCTTGAAAATATCGAGAAAACCGTCTTAACATTATCCGCATGTGTCGGTCGTAAAATTATTCGCATCGAGAAAGTGTGTATTGTGTTTGTATTGTGTAATATTTTGGACGTAAATTATATTTTTTCCTGCTGTTTTGATTTTCATATCGATATGAAGTTCGATCTTTCAAAGATACCTACGTTATAATTTTATCGATCGAAAAACATAAATATAAGTGAGAAACAAGGAGAAGAATAGACAAGACACAAATAAGTAAATATCTCAACATCTTGTAGAGACAAGACAAGAGTGCATAGATTGATGACATTTATAAGAATAAGTCGGTACTTTACTTTGCCAGGATGAAATTAAATTCAACCAAGATAAATGGGAGCGCTAAGCGTGCTTCGCTTCGGTGAACATGTGAAATGTAAATTAGTTTGAATTAAGGTGGAGTTCACTGGTCAGGCTTCTATTAAATGTATAAATACGCGTGGACGGTTTCCAGCGGCTGCGATTCGTGTTTCGTGTCGCGTTACCAGCTGCGACACTGTTTCTAATTAA]
[+] EMBL BI515038 [CATCGAAATTACTTGTTCTCAAGAGCCGAAGAATCGAGTAACGTGCGTTCAATAAGAAGAATCATTCTTGAAAATATCGAGAAAACCGTCTTAACATTATCCGCATGTGTCGGTCGTAAAATTATTCGCATCGAGAAAGTGTGTATTGTGTTTGTATTGTGTAATATTTTGGACGTAAATTATATTTTTTCCTGCTGTTTTGATTTTCATATCGATATGAAGTTCGATCTTTCAAAGATACCTACGTTATAATTTTATCGATCGAAAAACATAAATATAAGTGAGAAACAAGGAGAAGAATAGACAAGACACAAATAAGTAAATATCTCAACATCTTGTAGAGACAAGACAAGAGTGCATAGATTGATGACATTTATAAGAATAAGTCGGTACTTTACTTTGCCAGGATGAAATTAAATTCAACCAAGATAAATGGGAGCGCTAAGCGTGCTTCGCTTCGGTGAACATGTGAAATGTA ]
[+] EMBL BI510004 [ AAATTACTTGTTCTCAAGAGCCGAAGAATCGAGTAACGTGCGTTCAATAAGAAGAATCATTCTTGAAAATATCGAGAAAACCGTCTTAACATTATCCGCATGTGTCGGTCGTAAAATTATTCGCATCGAGAAAGTGTGTATTGTGTTTGTATTGTGTAATATTTTGGACGTAAATTATATTTTTTCCTGCTGTTTTGATTTTCATATCGATATGAAGTTCGATCTTTCAAAGATACCTACGTTATAATTTTATCGATCGAAAAACATAAATATAAGTGAGAAACAAGGAGAAGAATAGACAAGACACAAATAAGTAAATATCTCAACATCTTGTAGAGACAAGACAAGAGTGCATAGATTGATGACATTTATAAGAATAAGTCGGTACTTTACTTTGCCAGGATGAAATTAAATTCAACCAAGATAAATGGGAGCGCTAAGCGTGCTTCGCTTCGGTGAACATGTGAAATGTAAATTAGTTTGAATTAAGGTGGAGTTCACTGGTCAGGCTTCTATTAAATGTATAAATACGCGTGGACGGTTTCCAGCGGCTGCGATTCGTGTTTCGTGTCGCGTTACCAGCTGCGACACTGTTTCTAATTAA]
consensusID : consensus_715#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 496 fasta sequence
[GAAGAATCGAGTAACGTGCGTTCAATAAGAAGAATCATTCTTGAAAATATCGAGAAAACCGTCTTAACATTATCCGCATGTGTCGGTCGTAAAATTATTCGCATCGAGAAAGTGTGTATTGTGTTTGTATTGTGTAATATTTTGGACGTAAATTATATTTTTTCCTGCTGTTTTGATTTTCATATCGAGTAAGGATATTTCAAGATTAAAGATTTTTAATTATCTTGTTAAATATCCTCGTCTATTTTTATTAGATTAAACGTATTAATTAAATGTCAAGGAGATCTCGCAAGTTTAATCTAGCGTTGGACGGTGTATGGAACATCGTGAAGTGGTGTAGTTATGCAAATCGGTACCGAAACTTTTTAATGAAAATTTGTAATTTCGAATTTTCTAAGAACTCTAAACTTTCGAGATGCGATGAAAATGTTAATCAAACGNNGTCTCGGTGTTTCAGCGGGATATCCAACGCCTGTTGTGACTTGCTGTTTGCATT]
[+] EMBL BI516125 [GAAGAATCGAGTAACGTGCGTTCAATAAGAAGAATCATTCTTGAAAATATCGAGAAAACCGTCTTAACATTATCCGCATGTGTCGGTCGTAAAATTATTCGCATCGAGAAAGTGTGTATTGTGTTTGTATTGTGTAATATTTTGGACGTAAATTATATTTTTTCCTGCTGTTTTGATTTTCATATCGAGTAAGGATATTTCAAGATTAAAGATTTTTAATTATCTTGTTAAATATCCTCGTCTATTTTTATTAGATTAAACGTATTAATTAAATGTCAAGGAGATCTCGCAAGTTTAATCTAGCGTTGGACGGTGTATGGAACATCGTGAAGTGGTGTAGTTATGCAAATCGGTACCGAAACTTTTTAATGAAAATTTGTAATTTCGAATTTTCTAAGAACTCTAAACTTTCGAGATGCGATGAAAATGTTAATCAAACGNNGTCTCGGTGTTTCAGCGGGATATCCAACGCCTGTTGTGACTTGCTGTTTGCATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_715#0 CATCGAAATTACTTGTTCTCAAGAGCCGAAGAATCGAGTAACGTGCGTTCAATAAGAAGA 60
consensus_715#1 ---------------------------GAAGAATCGAGTAACGTGCGTTCAATAAGAAGA 33
*********************************
consensus_715#0 ATCATTCTTGAAAATATCGAGAAAACCGTCTTAACATTATCCGCATGTGTCGGTCGTAAA 120
consensus_715#1 ATCATTCTTGAAAATATCGAGAAAACCGTCTTAACATTATCCGCATGTGTCGGTCGTAAA 93
************************************************************
consensus_715#0 ATTATTCGCATCGAGAAAGTGTGTATTGTGTTTGTATTGTGTAATATTTTGGACGTAAAT 180
consensus_715#1 ATTATTCGCATCGAGAAAGTGTGTATTGTGTTTGTATTGTGTAATATTTTGGACGTAAAT 153
************************************************************
consensus_715#0 TATATTTTTTCCTGCTGTTTTGATTTTCATATCGATATGAAGTTCGATCTTTCAAAGATA 240
consensus_715#1 TATATTTTTTCCTGCTGTTTTGATTTTCATATCGA-GTAAGG----ATATTTCAAGATTA 208
*********************************** * * * ** ****** **
consensus_715#0 CCTACGTTATAATTTTATCGATCGAAAAACATAAATATAAGTGAGAAACAAGGAGAAGAA 300
consensus_715#1 AAGAT-TTTTAATTATCTTGTTAAATATCCTCGTCTATTTTTATTAGATTAAACGTATTA 267
* ** ***** * * * * * * * *** * * * * * * *
consensus_715#0 TAGACAAGACACAAATAAGTAAATATCTCAACATCTTGTAGAGACAAGACAAGAGTGCAT 360
consensus_715#1 ATTAAATGTCAAGGAGATCTCGCAAGTTTAATCTAGCGTTG-GACGGTGTATG-GAACAT 325
* * * ** * * * * * ** * ** * *** * * * ***
consensus_715#0 AGATTGATGACATTTATAAGAATAAGTCGGTACTTTACTTTGCCAGGATGAAATTAAATT 420
consensus_715#1 CGTGAAGTGGTGTAGTTATG--CAAATCGGTACCGAAACTTTTTA--ATGAAAATTTGTA 381
* ** * ** * ** ******* * ** * ****** * *
consensus_715#0 CAACCAAGATAAATGGGAGCGCTAAGCGTGCTTCGCTTCGGTGAACATGTGAAATGTAAA 480
consensus_715#1 ATTTCGAATTTTCTAAGAACTCTAAACTTTCGA-GATGCGATGAAAATGTTAATCAAACG 440
* * * * ** * **** * * * * * ** **** **** ** *
consensus_715#0 TTAGTTTGA-ATTAAGGTGGAGTTCACTGGTCAGGCTTCTATTAAATGTATAAATACGCG 539
consensus_715#1 NNGTCTCGGTGTTTCAGCGGGATATCCAACGCCTGTTGTGACTTGCTGTTTGCATT---- 496
* * ** * ** * * * * * * * *** * **
consensus_715#0 TGGACGGTTTCCAGCGGCTGCGATTCGTGTTTCGTGTCGCGTTACCAGCTGCGACACTGT 599
consensus_715#1 ------------------------------------------------------------
consensus_715#0 TTCTAATTAA 609
consensus_715#1 ----------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |