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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_747#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 571 fasta sequence
[TTTTTTTTTTATCGTTTTCGGATTTTAATATCGTGCTTTTGGAAATAAATAACAATGTCTTTCAGTAAAATAATTGTCCGGTCATTTTTCAGTAGTACTGCTGCTCAACAATTGGTTAAGCCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGTTCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATGAAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAAGTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTATTAGNTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTTAAATTATTAATGGCTGCTACTAGAGGTGAAGTTCCTTGTGAAGTAGTAACTGCAAAACCTCTTGATGCTGAAATGACATCTAAGCTTCAAACAGCTTTGAAAGGATTTTTAAGTAAAGGTCAATCTATTATGCTTACTGCAAAAGTTGATC]
[+] EMBL BI504372 [TTTTTTTTTTATCGTTTTCGGATTTTAATATCGTGCTTTTGGAAATAAATAACAATGTCTTTCAGTAAAATAATTGTCCGGTCATTTTTCAGTAGTACTGCTGCTCAACAATTGGTTAAGCCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGTTCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATGAAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAAGTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTATTAGNTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTTAAATTA ]
[+] EMBL BI512219 [ GCTCAACAATTGGTTAAGCCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGTTCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATGAAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAAGTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTATTAGCTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTTAAATTATTAATGGCTGCTACTAGAGGTGAAGTTCCTTGTGAAGTAGTAACTGCAAAACCTCTTGATGCTGAAATGACATCTAAGCTTCAAACAGCTTTGAAAGGATTTTTAAGTAAAGGTCAATCTATTATGCTTACTGCAAAAGTTGATC]
consensusID : consensus_747#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 273 fasta sequence
[TGGAATAATTTATTGTTTAATGACATACACATTGTTCATAAATTATTCTATATGAGTACTTTAACTTTGCTCATTTTACTGAATGTTATAAAAAGTAATCACAATGTTTCANNAATAATATCAAAATATTTTTTTTATTTTACTACNAACACTCATANNNATATATTTATCACCTATTGATATAATCATACCTCCCATAATGGAAGGATCAACTTTTGCAGTAAGCATAATAAATTGACCTTTACTTAAAAATCCTTTCAAAGCTGTTTGAAG]
[+] EMBL BI511177 [TGGAATAATTTATTGTTTAATGACATACACATTGTTCATAAATTATTCTATATGAGTACTTTAACTTTGCTCATTTTACTGAATGTTATAAAAAGTAATCACAATGTTTCANNAATAATATCAAAATATTTTTTTTATTTTACTACNAACACTCATANNNATATATTTATCACCTATTGATATAATCATACCTCCCATAATGGAAGGATCAACTTTTGCAGTAAGCATAATAAATTGACCTTTACTTAAAAATCCTTTCAAAGCTGTTTGAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_747#0 TTTTTTTTTTATCGTTTTCGGATTTTAATATCGTGCTTTTGGAAATAAATAACAATGTCT 60
consensus_747#1 ------------------------------------------------------------
consensus_747#0 TTCAGTAAAATAATTGTCCGGTCATTTTTCAGTAGTACTGCTGCTCAACAATTGGTTAAG 120
consensus_747#1 ------------------------------------------------------------
consensus_747#0 CCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGT 180
consensus_747#1 ------------------------------------------------------------
consensus_747#0 TCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATG 240
consensus_747#1 ----------------------------------------------------------TG 2
**
consensus_747#0 AAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAA 300
consensus_747#1 GAATAA--TTTATTGTTTAATGA-CATACACATTGTTCATAAATTATTCTATATGAGTAC 59
* ** * * ** ***** * * * ** *** * * * *** *
consensus_747#0 GTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTA 360
consensus_747#1 TT----TAACTTTGCTCATTTTACTGAA----TGTTATAAAAAGT--AATCACAA-TGTT 108
* **** *** ** *** * * * ****** ** * ** * *
consensus_747#0 TTAGNTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTT 420
consensus_747#1 TCANNAATAATATCAAAATATTTTTTTTATTTTACTACNAACACTCATANNNATATATTT 168
* * * ** ** ** ** ** * ** * **** * * *** ****
consensus_747#0 AAATTATTAATGGCTGCTACTAGAGGTGAAGTTCCTTGTGAAGTAGTAACTGCAAAACCT 480
consensus_747#1 A--TCACCTATTGATATAATCATACCTCCCATAATGGAAGGATCAACTTTTGCAGTAAGC 226
* * * ** * * * * * * * * * * **** *
consensus_747#0 CTTGATGCTGAAATGACATCTAAGCTTCAAACAGCTTTGAAAGGATTTTTAAGTAAAGGT 540
consensus_747#1 ----ATAATAAATTGACCTTTA--CTTAAAAATCCTTTCAAAGCTGTTTGAAG------- 273
** * ** **** * ** *** *** **** **** *** ***
consensus_747#0 CAATCTATTATGCTTACTGCAAAAGTTGATC 571
consensus_747#1 -------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |