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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_995#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 555 fasta sequence
[GTTGCACGATAAGTTTGCGGGGAGGGGGAAAGAAAAAAAGAGGAAAGCCGAAGCTGATGGCAAGATTTGCGAGAGTTGCGTTCAATGGCCGGAAAGGTGTCTGCCGATGGCGCGTACAACCGTGTTCATGCTCCCGATCTCGCGACGAATGCCACGAATTACGCGATATTTTCGGTCCTTTTGTTCGCGTGATTAATTCAAACTCGATACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGGAGCGAGAGAGAGTTCGAGTAGTAGCGAAAGCAGTATCACGCAGAAATTCGGTTTTAGTGAGGTTGATTTCGCAAGTGTTTTGAGAACTAGATGTCAGAGACGATCCATGAAGAATTCGATTTTGCAATAAAAGTGGAGAAAGAGAGGGAGAGATGTCAAGAGATTTTAAGTAACGAGTATTAATCCTTTGCACTCGATTGTCGTTGGTTTCGTACGAAAGGATTCGAACGAAGAGGTAAAATTAGTAGATNAGTATGTAGCGTGTCTTGGCAAATGATAGATTCTAGATGAAAAA]
[+] EMBL BI505771 [GTTGCACGATAAGTTTGCGGGGAGGGGGAAAGAAAAAAAGAGGAAAGCCGAAGCTGATGGCAAGATTTGCGAGAGTTGCGTTCAATGGCCGGAAAGGTGTCTGCCGATGGCGCGTACAACCGTGTTCATGCTCCCGATCTCGCGACGAATGCCACGAATTACGCGATATTTTCGGTCCTTTTGTTCGCGTGATTAATTCAAACTCGATACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGGAGCGAGAGAGAGTTCGAGTAGTAGCGAAAGCAGTATCACGCAGAAATTCGGTTTTAGTGAGGTTGATTTCGCAAGTGTTTTGAGAACTAGATGTCAGAGACGATCCATGAAGAATTCGATTTTGCAATAAAAGTGGAGAAAGAGAGGGAGAGATGTCAAGAGATTTTAAGTAACGAGTATTAATCCTTTGCACTCGATTGTCGTTGGTTTCGTACGAAAGGATTCGAACGAAGAGGTAAAATTAGTAGATNAGTATGTAGCGTGTCTTGGCAAATGATAGATTCTAGATGAAAA ]
[+] EMBL BI507066 [ TTTGCGAGAGTTGCGTTCAATGGCCGGAAAGGTGTCTGCCGATGGCGCGTACAACCGTGTTCATGCTCCCGATCTCGCGACGAATGCCACGAATTACGCGATATTTTCGGTCCTTTTGTTCGCGTGATTAATTCAAACTCGATACAC AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGGAGCGAGAGAGAGTTCGAGTAGTAGCGAAAGCAGTATCACGCAGAAATTCGGTTTTAGTGAGGTTGATTTCGCAAGTGTTTTGAGAACTAGATGTCAGAGACGATCCATGAAGAATTCGATTTTGCAATAAAAGTGGAGAAAGAGAGGGAGAGATGTCAAGAGATTTTAAGTAACGAGTATTAATCCTTTGCACTCGATTGTCGTTGGTTTCGTACGAAAGGATTCGAACGAAGAGGTAAAATTAGTAGATAAGTATGTAGCGTGTCTTGGCAAATGATAGATTCTAGATGAAAAA]
consensusID : consensus_995#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence
[CATGAAGAATTCGATTTTGCAATAAAAGTGGGGAAAGAAAAAAAGAGGAAAGCCGAAGCTGATGGCAAGATTTGCGAGAGTTGCGTTCAATGGCCGGAAAGGTGTCTGCCGATGGCGCGTACAACCGTGTTCATGCTCCCGATCTCGCGACGAATGCCACGAATTACGCGATATTTTCGGTCCTTTTGTTCGCGTGATTAATTCAAACTCGATACACAGAGAGAGAGAGAGAGAGAAAGAAAAAAAAAAAAGAAAAAAAGTTGCACGATAAGTTTGCGGGGAGGGGGAAAGAAAAAAAAAAAAAAAAAAAAGTGGAATGGAAAGTTTGCACCGTTGTTCCCTAAGACTTATGGCGTATTGTATGTACCTATTTCCATAAGTGCACGCTCGAGCGCGAATCGGAGAACGAGTCGATCCAGGCTCCGAGCTCGAGCCCAAAACCGAGAATAATATAAAATAAAAAAAAAAATTCTTCGAAACGAGCCGAACGAATTCCGTTTTTTCTTTTTGTCGCG]
[+] EMBL BI507976 [CATGAAGAATTCGATTTTGCAATAAAAGTGGGGAAAGAAAAAAAGAGGAAAGCCGAAGCTGATGGCAAGATTTGCGAGAGTTGCGTTCAATGGCCGGAAAGGTGTCTGCCGATGGCGCGTACAACCGTGTTCATGCTCCCGATCTCGCGACGAATGCCACGAATTACGCGATATTTTCGGTCCTTTTGTTCGCGTGATTAATTCAAACTCGATACACAGAGAGAGAGAGAGAGAGAAAGAAAAAAAAAAAAGAAAAAAAGTTGCACGATAAGTTTGCGGGGAGGGGGAAAGAAAAAAAAAAAAAAAAAAAAGTGGAATGGAAAGTTTGCACCGTTGTTCCCTAAGACTTATGGCGTATTGTATGTACCTATTTCCATAAGTGCACGCTCGAGCGCGAATCGGAGAACGAGTCGATCCAGGCTCCGAGCTCGAGCCCAAAACCGAGAATAATATAAAATAAAAAAAAAAATTCTTCGAAACGAGCCGAACGAATTCCGTTTTTTCTTTTTGTCGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_995#0 GTTGCACGAT--AAGTTTGCGGGGAG---GGGGAAAGAAAAAAAGAGGAAAGCCGAAGCT 55
consensus_995#1 CATGAAGAATTCGATTTTGCAATAAAAGTGGGGAAAGAAAAAAAGAGGAAAGCCGAAGCT 60
** * ** * ***** * *******************************
consensus_995#0 GATGGCAAGATTTGCGAGAGTTGCGTTCAATGGCCGGAAAGGTGTCTGCCGATGGCGCGT 115
consensus_995#1 GATGGCAAGATTTGCGAGAGTTGCGTTCAATGGCCGGAAAGGTGTCTGCCGATGGCGCGT 120
************************************************************
consensus_995#0 ACAACCGTGTTCATGCTCCCGATCTCGCGACGAATGCCACGAATTACGCGATATTTTCGG 175
consensus_995#1 ACAACCGTGTTCATGCTCCCGATCTCGCGACGAATGCCACGAATTACGCGATATTTTCGG 180
************************************************************
consensus_995#0 TCCTTTTGTTCGCGTGATTAATTCAAACTCGATACACAGAGAGAGAGAGAGAGAGAGAGA 235
consensus_995#1 TCCTTTTGTTCGCGTGATTAATTCAAACTCGATACACAGAGAGAGAGAGAGAGAGAAAGA 240
******************************************************** ***
consensus_995#0 GAGAGAGAGAGAGAGAGAGAAAGGGAGCGAGAGAGAGTTCGAGTAGTAGCGAAAGCAGTA 295
consensus_995#1 AAAAAAAAAAAGAAA----AAAAGTTGCACGATA-AGTTTGCGGGGAGGGGGAAAGAAAA 295
* * * * * * *** * ** ** * **** * * * * * ** * *
consensus_995#0 TCACGCAGAAATTCGGTTTTAGTGAGGTTGATTTCGCAAGTGTTTTGAGAACTAGATGTC 355
consensus_995#1 AAAAAAAAAAAAAAAAGTGGAATGGAAA-GTTTGCACCGTTGTTCC-----CTAAGACTT 349
* * *** * * ** * ** * * **** *** *
consensus_995#0 AGAGACGATCCATGAAGAATTCGATTTTGCAATAAAAGTGGAGAAAGAGAGGGAGAGATG 415
consensus_995#1 AT-GGCGTATTGT-ATGTACCTATTTCCATAAGTGCACGCTCGAGCGCGAATCGGAGAA- 406
* * ** * * * * ** ** * ** * ** ****
consensus_995#0 TCAAGAGATTTTAAGTAACGAGTATTAATCCTTTGCACTCGATTGTCGTTGGTTTCGTAC 475
consensus_995#1 -CGAGTCGATCCAGGCTCCGAGCTCGAGCCC---AAAACCGAGAATAATATAAAATAAAA 462
* ** * * * **** * ** * *** * * *
consensus_995#0 GAAAGGATTCGAACGAAGAGGTAAAATTAGTAGATNAGTATGTAGCGTGTCTTGGCAAAT 535
consensus_995#1 AAAAAAATTCTTCGAAACGAGCCGAACGAAT---TCCGT-TTTTTCTTTTTGTCGCG--- 515
*** **** ** * ** * * * ** * * * * * * **
consensus_995#0 GATAGATTCTAGATGAAAAA 555
consensus_995#1 --------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |