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Oryza sativa
cluster # 10059 cluster # 10059       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10059#0 length = 2573 sequences # 5  
 consensus_10059#1 length = 689 sequences # 1  
consensus_10059#2 length = 271 sequences # 1  
consensusID : consensus_10059#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2573
fasta sequence 
                              [CCCGCGAGAGGAAACCCTCGTCGTCGCCTCCTCCCCCAATCCCCTCCCTAGCTCTTGCCCCGATCGTCGATCCTCGCCTCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTCCTTCCTCCTCGCCCGCGCCGTACCCAGGTATGTCGGGCCGATCGTCGATCGATCCATGCCCCCGCCGTTCCTCCCGAAGACCTAACCCTAACGCTTCCGCATAGATCATCCCCGAGCTCAGATCCCGCTCCTCCACTCCTCATCGATCGGTCATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGACGCCGCCGCACTCCAGCTGCAGGTACGATCTAACTACGACTCTCCCCTCCCTGAATCGACTTCGTTTTTGCGAGATGATGAGACTAATTTTTTGAGTTTTATAGTGCAGAATCCGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGGATTTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTCATATATGCGTATATGTGTGCTCGGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAGAATGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTGCTTGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTCGGAATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAATTGGTGATTTTGAGGTACAATCTGTCATTTGGCCATGAATTCGTGGCATTATCAGAAGGTTTGCATTTGTTTTCGTTACACATTTGATGGTAATAGTTGTTGTACGGTTCTGTGGCAAAATCTATTCAAGGTAGTTAGATTAAATTTATTCAAGGTTTGCCATGATGTTGAGTACTTCACACGGAAGGTAATTTCTGAAGATATTCATTTTCCTTTCCCTGAACAACCAACAAAAACTGCTAGTCACTAAAGAACAGTGGTTAAAATATTTACATATATTTATTTCCCCAAAGGTTAGGCTGATTAATAGGAAATTACCACATGATAGATCTATAACATGATATGGTAACAACATATGAGTCCTTTTTATAATTTATTTACTCTTCTTTCTCCTCAAAAGGTTCTTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGGTTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCATCTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAATTCAACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGGCCTGTTCTCGTGTGAGACTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAAAAAACTATGTCATTGCTGTACTTGCTATCCATACCTTGGTGATTTTAAGATTTAAGTCGCTAATGATTCATAGAACTTTCCTCAAGTATGCTGACTATTGGCAAATAGTGGCCATCCCTATACCAACACGTTGCCATCTGGGATCACTCCCAGCTTTATCTGCTGAAATTGATAAATTCTTGTAGTTCTTTGGCTTTGAAAACTCAATCTATCACTCTCATCTGCCATTGCC--TTTTTTTTTCTCATGATAATCTTGCTTTTCCTCCTGACGAAATCAAATAGCTTCTGGCAGTGGTCTTAGGTTGCTATCTGCTTAACCACCTCAAAAGCTACTGCTTTTATTTATATTGTGATTTTGGTCAGAGTTCCAATAGCCAATAGGCATTCTGTCACCTTTGTCCCAAGGAACCTCTTTACGTGTCCACAATCAATTGAGTTCCATGTATACAACCAAAGCCATTATAACTGTTGCACTAATAAAGAAGATATTGGTAATCAATTCTAAGATTTTTCTTGGAACTAAAGCTCAAGTAAGAAAGCATTTCACATCCAGAGTTAAACTGTAGCTACCTATACATTCTAGATTTCTAGTGAAACTATAGCTACTGATATATTCTAACTCCATCAGCACATTTTTTGGCTCGAATGTGTAATTTAGCTTCTTTGTCATTCACCATTTGACTCACTTCATAAGGAAATAAATCTTAACCTCTGATTAATGAATGACCATTTTCGCATACTTAATACTAACCTTCAGATGCTACTTGTTTTTTCTTACTATTAAGTTGATTCAATATGCCTTCCTGCTGCTAGGTTCACCGCACATTATATTGTTCAGATTCCATTATTTTAGAAGTCCTTTTGCAAAAACAAATAAACGAATATAGAAACATTAATGAAATATAGAATTGTTGTTCAAAAATAAGCAAAACTTTATCTTTTTGAATATTAAGATATTAAATGTGAAAATCCATACTCTGGCTGATTTTTTTTGTGACACTTGATAGGCAAGAAAAATTAAAAGAAATGC]

[+] EMBL AK073090             [CCCGCGAGAGGAAACCCTCGTCGTCGCCTCCTCCCCCAATCCCCTCCCTAGCTCTTGCCCCGATCGTCGATCCTCGCCTCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTCCTTCCTCCTCGCCCGCGCCGTACCCAGGTATGTCGGGCCGATCGTCGATCGATCCATGCCCCCGCCGTTCCTCCCGAAGACCTAACCCTAACGCTTCCGCATAGATCATCCCCGAGCTCAGATCCCGCTCCTCCACTCCTCATCGATCGGTCATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGACGCCGCCGCACTCCAGCTGCAGGTACGATCTAACTACGACTCTCCCCTCCCTGAATCGACTTCGTTTTTGCGAGATGATGAGACTAATTTTTTGAGTTTTATAGTGCAGAATCCGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGGATTTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTCATATATGCGTATATGTGTGCTCGGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAGAATGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTGCTTGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTCGGAATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAATTGGTGATTTTGAGGTACAATCTGTCATTTGGCCATGAATTCGTGGCATTATCAGAAGGTTTGCATTTGTTTTCGTTACACATTTGATGGTAATAGTTGTTGTACGGTTCTGTGGCAAAATCTATTCAAGGTAGTTAGATTAAATTTATTCAAGGTTTGCCATGATGTTGAGTACTTCACACGGAAGGTAATTTCTGAAGATATTCATTTTCCTTTCCCTGAACAACCAACAAAAACTGCTAGTCACTAAAGAACAGTGGTTAAAATATTTACATATATTTATTTCCCCAAAGGTTAGGCTGATTAATAGGAAATTACCACATGATAGATCTATAACATGATATGGTAACAACATATGAGTCCTTTTTATAATTTATTTACTCTTCTTTCTCCTCAAAAGGTTCTTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGGTTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCATCTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAATTCAACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGGCCTGTTCTCGTGTGAGACTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAAAAAACTATGTCATTGCTGTACTTGCTATCCATACCTTGGTGATTTTAAGATTTAAGTCGCTAATGATTCATAGAACTTTCCTCAAGTATGCTGACTATTGGCAAATAGTGGCCATCCCTATACCAACACGTTGCCATCTGGGATCACTCCCAGCTTTATCTGCTGAAATTGATAAATTCTTGTAGTTCTTTGGCTTTGAAAACTCAATCTATCACTCTCATCTGCCATTGCCTTTTTTTTTTTCTCATGATAATCTTGCTTTTCCTCCTGACGAAATCAAATAGCTTCTGGCAGTGGTCTTAGGTTGCTATCTGCTTAACCACCTCAAAAGCTACTGCTTTTATTTATATTGTGATTTTGGTCAGAGTTCCAATAGCCAATAGGCATTCTGTCACCTTTGTCCCAAGGAACCTCTTTACGTGTCCACAATCAATTGAGTTCCATGTATACAACCAAAGCCATTATAACTGTTGCACTAATAAAGAAGATATTGGTAATCAATTCTAAGATTTTTCTTGGAACTAAAGCTCAAGTAAGAAAGCATTTCACATCCAGAGTTAAACTGTAGCTACCTATACATTCTAGATTTCTAGTGAAACTATAGCTACTGATATATTCTAACTCCATCAGCACATTTTTTGGCTCGAATGTGTAATTTAGCTTCTTTGTCATTCACCATTTGACTCACTTCATAAGGAAATAAATCTTAACCTCTGATTAATGAATGACCATTTTCGCATACTTAATACTAACCTTCAGATGCTACTTGTTTTTTCTTACTATTAAGTTGATTCAATATGCCTTCCTGCTGCTAGGTTCACCGCACATTATATTGTTCAGATTCCATTATTTTAGAAGTCCTTTTGCAAAAACAAATAAACGAATATAGAAACATTAATGAAATATAGAATTGTTGTTCAAAAATAAGCAAAACTTTATCTTTTTGAATATTAAGATATTAAATGTGAAAATCCATACTCTGGCTGATTTTTTTTGTGACACTTGATAGGCAAGAAAAATTAAAAGAAATGC]
[+] EMBL CB000474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTTGACGCTTGGTAATATTGTCTTTAATTATTCCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGGTTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCATCTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAATTCAACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGGCCTGTTCTCGTGTGAGACTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAAAAAACTATGTCATTGCTGTACTTGCTATCCATACCTTGGTGATTTTAAGATTTAAGTCGCTAATGATTCATAGAACTTTCCTCAAGTATGCTGACTATTGGCAAATAGTGGCCATCCCTATACCAACACGTTGCCATCTGGGATCACTCCCAGCTTTATCTGCTGAAATTGATAAATTCTTGTAGTTCTTTGGCTTTGAAAACTCAATCTATCACTCTCATCTGCCATTGCC  TTTTTTTTTCTCATGATAATCTTGCTTTTCCTCCTGACGAAATCAAATAGCTTCTGGCAGTGGTCTTAGGTTGCTATCTGCTTAACCACCTCAAAAGCTACTGCTTTTATTTATATTGTGATTTTGGTCAGAGTTCCAATAGCCAATAGGCATTCTGTCACCTTTGTCCCAAGGAACCTCTTTACGTGTCCACAATCAATTGAGTTTCATGTATACAACCAAAGCCATTATAACTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB000539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGGTTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCATCTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAATTCAACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGGCCTGTTCTCGTGTGAGACTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAAAAAACTATGTCATTGCTGTACTTGCTATCCATACCTTGGTGATTTTAAGATTTAAGTCGCTAATGATTCATAGAACTTTCCTCAAGTATGCTGACTATTGGCAAATAGTGGCCATCCCTATACCAACACGTTGCCATCTGGGATCACTCCCAGCTTTATCTGCTGAAATTGATAAATTCTTGTAGTTCTTTGGCTTTGAAAACTCAATCTATCACTCTCATCTGCCATTGCC  TTTTTTTTTCTCATGATAATCTTGCTTTTCCTCCTGACGAAATCAAATAGCTTCTGGCAGTGGTCTTAGGTTGCTATCTGCTT ACCACCTCAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA999451             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGGTTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCATCTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAATTCAACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGGCCTGTTCTCGTGTGAGACTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAAAAAACTATGTCATTGCTGTACTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA999810             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGGTTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCATCTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAATTCAACTGTGTACCACCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_10059#0
CCCGCGAGAGGAAACCCTCGTCGTCGCCTCCTCCCCCAATCCCCTCCCTAGCTCTTGCCC
CGATCGTCGATCCTCGCCTCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTC
CTTCCTCCTCGCCCGCGCCGTACCCAGGTATGTCGGGCCGATCGTCGATCGATCCATGCC
CCCGCCGTTCCTCCCGAAGACCTAACCCTAACGCTTCCGCATAGATCATCCCCGAGCTCA
GATCCCGCTCCTCCACTCCTCATCGATCGGTCATGGCCGCCGCACCAGCACCAGCGCTAG
CCCCCGACGCCGCCGCACTCCAGCTGCAGGTACGATCTAACTACGACTCTCCCCTCCCTG
AATCGACTTCGTTTTTGCGAGATGATGAGACTAATTTTTTGAGTTTTATAGTGCAGAATC
CGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGGAT
TTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTCATATATGCGTATATGTGTGCTC
GGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAGAA
TGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTGCT
TGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTCGG
AATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAATTG
GTGATTTTGAGGTACAATCTGTCATTTGGCCATGAATTCGTGGCATTATCAGAAGGTTTG
CATTTGTTTTCGTTACACATTTGATGGTAATAGTTGTTGTACGGTTCTGTGGCAAAATCT
ATTCAAGGTAGTTAGATTAAATTTATTCAAGGTTTGCCATGATGTTGAGTACTTCACACG
GAAGGTAATTTCTGAAGATATTCATTTTCCTTTCCCTGAACAACCAACAAAAACTGCTAG
TCACTAAAGAACAGTGGTTAAAATATTTACATATATTTATTTCCCCAAAGGTTAGGCTGA
TTAATAGGAAATTACCACATGATAGATCTATAACATGATATGGTAACAACATATGAGTCC
TTTTTATAATTTATTTACTCTTCTTTCTCCTCAAAAGGTTCTTTGACGCTTGGTAATATT
GTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTG
AAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGG
TTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCAT
CTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAAT
TCAACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGGCCTGTTCTCGTGTGAGA
CTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAAAAAACTATGTCATTGCT
GTACTTGCTATCCATACCTTGGTGATTTTAAGATTTAAGTCGCTAATGATTCATAGAACT
TTCCTCAAGTATGCTGACTATTGGCAAATAGTGGCCATCCCTATACCAACACGTTGCCAT
CTGGGATCACTCCCAGCTTTATCTGCTGAAATTGATAAATTCTTGTAGTTCTTTGGCTTT
GAAAACTCAATCTATCACTCTCATCTGCCATTGCCTTTTTTTTTCTCATGATAATCTTGC
TTTTCCTCCTGACGAAATCAAATAGCTTCTGGCAGTGGTCTTAGGTTGCTATCTGCTTAA
CCACCTCAAAAGCTACTGCTTTTATTTATATTGTGATTTTGGTCAGAGTTCCAATAGCCA
ATAGGCATTCTGTCACCTTTGTCCCAAGGAACCTCTTTACGTGTCCACAATCAATTGAGT
TCCATGTATACAACCAAAGCCATTATAACTGTTGCACTAATAAAGAAGATATTGGTAATC
AATTCTAAGATTTTTCTTGGAACTAAAGCTCAAGTAAGAAAGCATTTCACATCCAGAGTT
AAACTGTAGCTACCTATACATTCTAGATTTCTAGTGAAACTATAGCTACTGATATATTCT
AACTCCATCAGCACATTTTTTGGCTCGAATGTGTAATTTAGCTTCTTTGTCATTCACCAT
TTGACTCACTTCATAAGGAAATAAATCTTAACCTCTGATTAATGAATGACCATTTTCGCA
TACTTAATACTAACCTTCAGATGCTACTTGTTTTTTCTTACTATTAAGTTGATTCAATAT
GCCTTCCTGCTGCTAGGTTCACCGCACATTATATTGTTCAGATTCCATTATTTTAGAAGT
CCTTTTGCAAAAACAAATAAACGAATATAGAAACATTAATGAAATATAGAATTGTTGTTC
AAAAATAAGCAAAACTTTATCTTTTTGAATATTAAGATATTAAATGTGAAAATCCATACT
CTGGCTGATTTTTTTTGTGACACTTGATAGGCAAGAAAAATTAAAAGAAATGC

consensusID : consensus_10059#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence 
                              [GGGGGCCCCTCGCTTCCGGGGCGGCTTTATTTTTCTTCCCCGCGAGAGGAAACCCCTTGGTNGTTGCCTCCCTTCCCNCCAATCCCTCCCTAGCTCTTGCCCCGATCGTCGATCCTCGCCTCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTCCTTCCTTCCTCCTCGCCCGCGCCGTACCCAGATCATCCCCGAGCTCAGATCCCGCTCCTCCACTCCACATCGATCGGTCATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGANGCCGCCGCACTCCAGCTGCAGAATCCGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGGATTTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTTATATATGCGTATATGTGTGCTCGGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAGAATGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTGCTTGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTCGGAATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAATTGGTGATTTTGAGGTCCAAAAAAAAAAAA]

[-] EMBL CA761991             [GGGGGCCCCTCGCTTCCGGGGCGGCTTTATTTTTCTTCCCCGCGAGAGGAAACCCCTTGGTNGTTGCCTCCCTTCCCNCCAATCCCTCCCTAGCTCTTGCCCCGATCGTCGATCCTCGCCTCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTCCTTCCTTCCTCCTCGCCCGCGCCGTACCCAGATCATCCCCGAGCTCAGATCCCGCTCCTCCACTCCACATCGATCGGTCATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGANGCCGCCGCACTCCAGCTGCAGAATCCGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGGATTTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTTATATATGCGTATATGTGTGCTCGGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAGAATGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTGCTTGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTCGGAATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAATTGGTGATTTTGAGGTCCAAAAAAAAAAAA]




>consensus_10059#1
GGGGGCCCCTCGCTTCCGGGGCGGCTTTATTTTTCTTCCCCGCGAGAGGAAACCCCTTGG
TNGTTGCCTCCCTTCCCNCCAATCCCTCCCTAGCTCTTGCCCCGATCGTCGATCCTCGCC
TCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTCCTTCCTTCCTCCTCGCCC
GCGCCGTACCCAGATCATCCCCGAGCTCAGATCCCGCTCCTCCACTCCACATCGATCGGT
CATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGANGCCGCCGCACTCCAGCTGCAGAA
TCCGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGG
ATTTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTTATATATGCGTATATGTGTGC
TCGGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAG
AATGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTG
CTTGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTC
GGAATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAAT
TGGTGATTTTGAGGTCCAAAAAAAAAAAA

consensusID : consensus_10059#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 271
fasta sequence 
                              [TTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAAATGAGTTAATTGTGGCACACCAGTCATCTTACTGGCTGGCTGCCTTTTGGATATTTGGCTACACCATACAATGATGGTGCTTTGTGGTAACTGTTAAATCCATAAATCATCTGCTGGTTTGACCATCAAGCTATGCTTGCCCATTGGTTCCTTGCGACATCTGAATTAATTCACACTGTGT]

[+] EMBL CA999454             [TTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAAATGAGTTAATTGTGGCACACCAGTCATCTTACTGGCTGGCTGCCTTTTGGATATTTGGCTACACCATACAATGATGGTGCTTTGTGGTAACTGTTAAATCCATAAATCATCTGCTGGTTTGACCATCAAGCTATGCTTGCCCATTGGTTCCTTGCGACATCTGAATTAATTCACACTGTGT]




>consensus_10059#2
TTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAA
AACTCTGCGGTTGCATTTGAAATGTTCTAAATGAGTTAATTGTGGCACACCAGTCATCTT
ACTGGCTGGCTGCCTTTTGGATATTTGGCTACACCATACAATGATGGTGCTTTGTGGTAA
CTGTTAAATCCATAAATCATCTGCTGGTTTGACCATCAAGCTATGCTTGCCCATTGGTTC
CTTGCGACATCTGAATTAATTCACACTGTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10059#0      CCCGCGAGAGGAAACCCTCGTCGTCGCCTCCTCCCCCAATCCCCTCCCTAGCTCTTGCCC 60
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      CGATCGTCGATCCTCGCCTCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTC 120
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      CTTCCTCCTCGCCCGCGCCGTACCCAGGTATGTCGGGCCGATCGTCGATCGATCCATGCC 180
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      CCCGCCGTTCCTCCCGAAGACCTAACCCTAACGCTTCCGCATAGATCATCCCCGAGCTCA 240
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      GATCCCGCTCCTCCACTCCTCATCGATCGGTCATGGCCGCCGCACCAGCACCAGCGCTAG 300
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      CCCCCGACGCCGCCGCACTCCAGCTGCAGGTACGATCTAACTACGACTCTCCCCTCCCTG 360
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      AATCGACTTCGTTTTTGCGAGATGATGAGACTAATTTTTTGAGTTTTATAGTGCAGAATC 420
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      CGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGGAT 480
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTCATATATGCGTATATGTGTGCTC 540
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      GGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAGAA 600
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTGCT 660
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTCGG 720
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      AATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAATTG 780
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      GTGATTTTGAGGTACAATCTGTCATTTGGCCATGAATTCGTGGCATTATCAGAAGGTTTG 840
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      CATTTGTTTTCGTTACACATTTGATGGTAATAGTTGTTGTACGGTTCTGTGGCAAAATCT 900
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      GGGGGCCCCTCGCTTCCGGGGCGGCTTTATTTTTCTTCCCCGCGAGAGGAAACCCCTTGG 60
                                                                                   

consensus_10059#0      ATTCAAGGTAGTTAGATTAAATTTATTCAAGGTTTGCCATGATGTTGAGTACTTCACACG 960
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      TNGTTGCCTCCCTTCCCNCCAATCCCTCCCTAGCTCTTGCCCCGATCGTCGATCCTCGCC 120
                                                                                   

consensus_10059#0      GAAGGTAATTTCTGAAGATATTCATTTTCCTTTCCCTGAACAACCAACAAAAACTGCTAG 1020
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      TCGCCGGAGAATCCCCGAGCCGCGCCGCCCCTTCCTTCCTTCCTTCCTTCCTCCTCGCCC 180
                                                                                   

consensus_10059#0      TCACTAAAGAACAGTGGTTAAAATATTTACATATATTTATTTCCCCAAAGGTTAGGCTGA 1080
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      GCGCCGTACCCAGATCATCCCCGAGCTCAGATCCCGCTCCTCCACTCCACATCGATCGGT 240
                                                                                   

consensus_10059#0      TTAATAGGAAATTACCACATGATAGATCTATAACATGATATGGTAACAACATATGAGTCC 1140
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      CATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGANGCCGCCGCACTCCAGCTGCAGAA 300
                                                                                   

consensus_10059#0      TTTTTATAATTTATTTACTCTTCTTTCTCCTCAAAAGGTTCTTTGACGCTTGGTAATATT 1200
consensus_10059#2      -----------------------------------------TTTGACGCTTGGTAATATT 19
consensus_10059#1      TCCGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGG 360
                                                                 * **  * ****  *   

consensus_10059#0      GTCT--TTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTC-TGCGGTTGCAT 1257
consensus_10059#2      GTCT--TTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTC-TGCGGTTGCAT 76
consensus_10059#1      ATTTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTTATATATGCGTATATGTGTGC 420
                        * *  **  *  * ** *     ***        ***  * * *  * *     **   

consensus_10059#0      TTGAAATGTTCTAGATGTGTTAAT--TGTGGCACACAAGTCATCTTACTG-CTGGTT--G 1312
consensus_10059#2      TTGAAATGTTCTAAATGAGTTAAT--TGTGGCACACCAGTCATCTTACTGGCTGGCT--G 132
consensus_10059#1      TCGGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAG 480
                       * * **  *  *  **  *   **  ***           *  ***  **  *** *  *

consensus_10059#0      CCTTTTGGTTATTTGGCTACAC-CATTCAATGATGGTGTTTTGTGGCAA-CGTTTAGATC 1370
consensus_10059#2      CCTTTTGGATATTTGGCTACAC-CATACAATGATGGTGCTTTGTGGTAA-CTGTTAAATC 190
consensus_10059#1      AATGTCGTGCATATGCATATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTG 540
                         * * *   ** **  ** *  ***      *** **    ***     *   *   * 

consensus_10059#0      CAGAAATCATCTGCAGGTTTGACCATCGAGC----TATGCTTGCCCAGGTGTTCCT-TGC 1425
consensus_10059#2      CATAAATCATCTGCTGGTTTGACCATCAAGC----TATGCTTGCCCATTGGTTCCT-TGC 245
consensus_10059#1      CTTGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTC 600
                       *    ****      ******   **    *    *  * ** *       *   * * *

consensus_10059#0      AACATCAA-AATTAATTCA-ACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGG 1483
consensus_10059#2      GACATCTG-AATTAATTCACACTGTGT--------------------------------- 271
consensus_10059#1      GGAATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAAT 660
                          **       **  **  *  ****                                 

consensus_10059#0      CCTGTTCTCGTGTGAGACTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAA 1543
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      TGGTGATTTTGAGGTCCAAAAAAAAAAAA------------------------------- 689
                                                                                   

consensus_10059#0      AAAACTATGTCATTGCTGTACTTGCTATCCATACCTTGGTGATTTTAAGATTTAAGTCGC 1603
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TAATGATTCATAGAACTTTCCTCAAGTATGCTGACTATTGGCAAATAGTGGCCATCCCTA 1663
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TACCAACACGTTGCCATCTGGGATCACTCCCAGCTTTATCTGCTGAAATTGATAAATTCT 1723
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TGTAGTTCTTTGGCTTTGAAAACTCAATCTATCACTCTCATCTGCCATTGCCTTTTTTTT 1783
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TCTCATGATAATCTTGCTTTTCCTCCTGACGAAATCAAATAGCTTCTGGCAGTGGTCTTA 1843
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      GGTTGCTATCTGCTTAACCACCTCAAAAGCTACTGCTTTTATTTATATTGTGATTTTGGT 1903
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      CAGAGTTCCAATAGCCAATAGGCATTCTGTCACCTTTGTCCCAAGGAACCTCTTTACGTG 1963
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TCCACAATCAATTGAGTTCCATGTATACAACCAAAGCCATTATAACTGTTGCACTAATAA 2023
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      AGAAGATATTGGTAATCAATTCTAAGATTTTTCTTGGAACTAAAGCTCAAGTAAGAAAGC 2083
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      ATTTCACATCCAGAGTTAAACTGTAGCTACCTATACATTCTAGATTTCTAGTGAAACTAT 2143
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      AGCTACTGATATATTCTAACTCCATCAGCACATTTTTTGGCTCGAATGTGTAATTTAGCT 2203
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TCTTTGTCATTCACCATTTGACTCACTTCATAAGGAAATAAATCTTAACCTCTGATTAAT 2263
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      GAATGACCATTTTCGCATACTTAATACTAACCTTCAGATGCTACTTGTTTTTTCTTACTA 2323
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TTAAGTTGATTCAATATGCCTTCCTGCTGCTAGGTTCACCGCACATTATATTGTTCAGAT 2383
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      TCCATTATTTTAGAAGTCCTTTTGCAAAAACAAATAAACGAATATAGAAACATTAATGAA 2443
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      ATATAGAATTGTTGTTCAAAAATAAGCAAAACTTTATCTTTTTGAATATTAAGATATTAA 2503
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      ATGTGAAAATCCATACTCTGGCTGATTTTTTTTGTGACACTTGATAGGCAAGAAAAATTA 2563
consensus_10059#2      ------------------------------------------------------------
consensus_10059#1      ------------------------------------------------------------
                                                                                   

consensus_10059#0      AAAGAAATGC 2573
consensus_10059#2      ----------
consensus_10059#1      ----------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)