cluster # 10062

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Oryza sativa
cluster # 10062 cluster # 10062 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10062#0 length = 1043 sequences # 7
consensusID : consensus_10062#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1043
fasta sequence
                              [CATTATTATATTAGGTATAGCTAGGTGATCGATCGATCGTGATCATGGGAATGGAAGACGACGCCGCCGGGCGCGGCACGACGGTGCCGTTCCTTGTGGCGGTGCGGTTTGTGGTGGCCTTAGCGGTGGGCGCGGTCACCTTCGCGGTGATCGTCATGGTGATCGCCATGGTCAGTCGCCCGGAGGAGATTCAGCTCTCCATCGACCGGGGCTACATCACTGTGTATGATGACTATGGCTCGGAAGTATTACCGACAGCGACGACGTCGCTGGCGGCGATTTTAGGAGGGTTTGTCCAAAGCCGCCCCAGCACAGCACAACTCGCCGTCTCCCTAACCGCAAGCTACTCCAGCCAGCGCGGGCATAAAGACAAGATCATCAACTGCTCAGACATCACCATCGGCCTAGTGGACATGACGCTGTCACCGGCGTCGTGGGCATCCGGCCAGATGCCGGCGAAGATCAACGATACCATCGTCTGGTTCAAACTCAACAACGGCTTCACGTTGCTCAAGGATACGTCGCACACGGAGGCGATGACGGTGACCATCACAAACAGCAGCCAGATCATGGAGTACATAGAGCACCGGCTCAAACAAGAGGACGTCTTCCACGTGTTGGTCATGGTGCACATCATCACCCCCTCGACTAATCCGAATTCGCCTTCGCCTCCGCCTCCGCCTCCGCCTCCGT-CTCCGGCT-CCGGCTCCGGCTCCT-T-CT-AATGCT-CAGT-CTCCTT-CTAAT-AATGGTCCGGCACACACATTCTACTGCTGGCCCATCACCATCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTTCTTCCGTTGTCCCTGGCAACCAAACCAATAGGGCTA-ACGCGACAAGCGTGACCAGTGGCGAATCTATGCCTGTGCAAAT-CGGTGGATAACAAGTACGTACAAATAATTCCATACAAAATGACTC-GAGTAAAA-TTGAGAATC-CTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT-CA-AATAATAAATGAACTACTCCT]

[+] EMBL AK108643             [CATTATTATATTAGGTATAGCTAGGTGATCGATCGATCGTGATCATGGGAATGGAAGACGACGCCGCCGGGCGCGGCACGACGGTGCCGTTCCTTGTGGCGGTGCGGTTTGTGGTGGCCTTAGCGGTGGGCGCGGTCACCTTCGCGGTGATCGTCATGGTGATCGCCATGGTCAGTCGCCCGGAGGAGATTCAGCTCTCCATCGACCGGGGCTACATCACTGTGTATGATGACTATGGCTCGGAAGTATTACCGACAGCGACGACGTCGCTGGCGGCGATTTTAGGAGGGTTTGTCCAAAGCCGCCCCAGCACAGCACAACTCGCCGTCTCCCTAACCGCAAGCTACTCCAGCCAGCGCGGGCATAAAGACAAGATCATCAACTGCTCAGACATCACCATCGGCCTAGTGGACATGACGCTGTCACCGGCGTCGTGGGCATCCGGCCAGATGCCGGCGAAGATCAACGATACCATCGTCTGGTTCAAACTCAACAACGGCTTCACGTTGCTCAAGGATACGTCGCACACGGAGGCGATGACGGTGACCATCACAAACAGCAGCCAGATCATGGAGTACATAGAGCACCGGCTCAAACAAGAGGACGTCTTCCACGTGTTGGTCATGGTGCACATCATCACCCCCTCGACTAATCCGAATTCGCCTTCGCCTCCGCCTCCGCCTCCGCCTCCGT CTCCGGCT CCGGCTCCGGCTCCT T CT AATGCT CAGT CTCCTT CTAAT AATGGTCCGGCACACACATTCTACTGCTGGCCCATCACCATCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTTCTTCCGTTGTCCCTGGCAACCAAACCAATAGGGCTA ACGCGACAAGCGTGACCAGTGGCGAATCTATGCCTGTGCAAAT CGGTGGATAACAAGTACGTACAAATAATTCCATACAAAATGACTC GAGTAAAA TTGAGAATC CTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT CA AATAATAAATGAACTACTCCT]
[-] EMBL BI306431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGCCTCCGCCTCCGCCTCCGT TTCCGGCT CCGGCTCCGGCTCCT T CT AATGCT CAGT CTCCTT CTAAT AATGGTCCGGCACACACATTCTACTGCTGGCCCATCACCATCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTTCTTCCGTTGTCCCTGGCAACCAAACCAATAGGGCTA ACGCGACAAGCGTGACCAGTGGCGAATCTATGCCTGTGCAAAT CGGTGGATAACAAGTACGTACAAATAATTCCATACAAAATGACTC GAGTAAAA TTGAGAATC CTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT CA AATAATAAATGA         ]
[-] EMBL CB965005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCCTCCGCCTCCGCCTCCGT CTCCGGCT CCGGCTCCGGCTCCT T CT AATGCT CAGT CTCCTT CTAAT AATGGTCCGGCACACACATTCTACTGCTGGCCCATCACCATCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTTCTTCCGTTGTCCCTGGCAACCAAACC ATAGGGCTATACGCGACAAGCGTGACCAGTGGCGAATCTATGCCTGTGCAAAT CGGTGGATAACAAGTACGTACAAATAATTCCATAC AAATGACTC GAGTAAAA TTGAGAATC CTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT CA AATAATAAATGA         ]
[-] EMBL CB967442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCCTCCGCCTCCGCCTCCGT CTCCGGCT CCGGCTCCGGCTCCT T CT AATGCT CAGT CTCCTT CTAAT AATGGTCCGGCACACACATTCTACTGCTGGCCCATCACCATCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTTCTTCCGTTGTCCCTGGCAACCAAACCTATAGGGCTA ACGCGACAAGCGTGACCAGTGGCGAATCTATGCCTGTGCAAAT CGGTGGATAACAAGTACGTACAAATAATTCCATACANAATGACTC GAGTAAAA TTGAGAATC CTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT CA AATAATAAATGA         ]
[-] EMBL CB965915             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCCTCCGCCTCCGCCTCCGT CTCCGGCT CCGGCTCCGGCTCCT T CT AATGCT CAGT CTCCTT CTAAT AATGGTCCGGCACACACATTCTACTGCTGGCCCATCACCATCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTTCTTCCGTTGTCCCTGGCAACCAAACCAATAGGGCTA ACGCGACAAGCGTGACCAGTGGCGAATCTATGCCTGTGCAAAT CGGTGGATAACAAGTACGTACAAATAATTCCATACTAAATGACTC GAGTAAAA TTGAGAATC CTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT CA AATAATAAATGA         ]
[-] EMBL CB965774             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCCGCCTCCGTGCTCCGGCTGCCGGCTCCGGCTCCTGTGCTGAATGCTGCAGTGCTCCTTGCTAATGAATGTGCCGGCACACACATTCTACTGCTGGCCCATCACCATCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTTCTTCCGTTGTCCCTGGCAACCAAACCAATAGGGCTA ACGCGACAAGCGTGACCAGTGGCGAATCTATGCCTGTGCAAATACGGTGGATAACAAGTACGTACAAATAATTCCATACAAAATGACGCAGAGTAAAA TTGAGAATC CTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT CAGAATAATAAATGA         ]
[-] EMBL CB966201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTAAAATTTGAGAATCTCTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAATGCA AATAATAAATGA         ]




>consensus_10062#0
CATTATTATATTAGGTATAGCTAGGTGATCGATCGATCGTGATCATGGGAATGGAAGACG
ACGCCGCCGGGCGCGGCACGACGGTGCCGTTCCTTGTGGCGGTGCGGTTTGTGGTGGCCT
TAGCGGTGGGCGCGGTCACCTTCGCGGTGATCGTCATGGTGATCGCCATGGTCAGTCGCC
CGGAGGAGATTCAGCTCTCCATCGACCGGGGCTACATCACTGTGTATGATGACTATGGCT
CGGAAGTATTACCGACAGCGACGACGTCGCTGGCGGCGATTTTAGGAGGGTTTGTCCAAA
GCCGCCCCAGCACAGCACAACTCGCCGTCTCCCTAACCGCAAGCTACTCCAGCCAGCGCG
GGCATAAAGACAAGATCATCAACTGCTCAGACATCACCATCGGCCTAGTGGACATGACGC
TGTCACCGGCGTCGTGGGCATCCGGCCAGATGCCGGCGAAGATCAACGATACCATCGTCT
GGTTCAAACTCAACAACGGCTTCACGTTGCTCAAGGATACGTCGCACACGGAGGCGATGA
CGGTGACCATCACAAACAGCAGCCAGATCATGGAGTACATAGAGCACCGGCTCAAACAAG
AGGACGTCTTCCACGTGTTGGTCATGGTGCACATCATCACCCCCTCGACTAATCCGAATT
CGCCTTCGCCTCCGCCTCCGCCTCCGCCTCCGTCTCCGGCTCCGGCTCCGGCTCCTTCTA
ATGCTCAGTCTCCTTCTAATAATGGTCCGGCACACACATTCTACTGCTGGCCCATCACCA
TCGGCTATGGCTACAGTGCCCTGCAAGACACCGACGATGTCGGCTGCAAAAGCATAGGTT
CTTCCGTTGTCCCTGGCAACCAAACCAATAGGGCTAACGCGACAAGCGTGACCAGTGGCG
AATCTATGCCTGTGCAAATCGGTGGATAACAAGTACGTACAAATAATTCCATACAAAATG
ACTCGAGTAAAATTGAGAATCCTCAAGTACTTGTTTTGCTTTTGTGTAAAGCACGGTAAT
CAAATAATAAATGAACTACTCCT
clustalw multiple alignements is not computed in this case