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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10119#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3065 fasta sequence
[TTCCTCCTCCGCGCCACCGCCACCTCCACCTCCACCGCCGCCTCCGCCGCCGCCGCCTCGCTCCTCCTCCGATGCCACCACCCGCTCTCCCCGCCGCCTAGAACCCTAGCCCTCGCCCTCCCCGCTCGCCCTCCCCCCGCCCTCCTCCTCCCCTCCCGCTTCCGCCTCTCCTCCTCCGCGTCCTCCTCCTCCCGACGCCGCGCGACCGGTGCCGCATCCGCATCCGCGGGCGCGGGCGCGGGGAAGGGGAAGGGGAAGGGGGGCAAGTCCAGCGGGGGGAAGGCGGCGGCCGCGGCGGCGGCGGGAGGAGCGGCCATGTCGGCCTCGGCGGGTGGGGGTGGAGGTGGGGGAGGGAAGCGGACGGTGGCGGATGTGCTGATGGGGAACGCGCGGGACGCGGCGAGGAAGGCGAAGAAGGGGGCGGCGCAGTCGCCGAAGAAGCTGAAGACGCAGCCCCAGCCCGCCGCGGAGGCGGATGGCGGCGCGGTGGCGAAGCCGGAGGAGAAGCCGCATTCGCCGGTGAAGCCCAAGCGGTCGTCCTCGCCGACTAAGTCCAACTCGCCAGGTGAGGGGAAGAGGTCCGAATCGGTGGCTGCTGGCGCGAAACCGGAGGCGAAGGAGAAGCCCTCGCCGAAGAAGCCTAAAACCCTAGGTGCCAAATCCGACACCAAGTCCTCCGCGGAAGGCGTTGAGAAGGAGAAGAGGAGGTCACCATCTCCGACGAAGGCAAAAGCGCTAGCTTCTGAATCCCAGGACATAAAGAAGCCCTCCTCACCTAAGAAGACCAAAGCCTTGGATGCCCCCAAGTCTGAGGAAAAGGACACCACCCTCGAGCTCAAGAAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGGGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTATTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGTCGAAGATGAGGATTGGGTTGGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTTGGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGTCTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGATACATTGCCTGGAAGATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGATGTTGTTGATGCGGTTTCTAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGTGAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGATACTTAGCACACGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTTGATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCAT-GGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGTTGTGCTTTCATTTTTTTTAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTAAAAAAA]
[+] EMBL AK120278 [TTCCTCCTCCGCGCCACCGCCACCTCCACCTCCACCGCCGCCTCCGCCGCCGCCGCCTCGCTCCTCCTCCGATGCCACCACCCGCTCTCCCCGCCGCCTAGAACCCTAGCCCTCGCCCTCCCCGCTCGCCCTCCCCCCGCCCTCCTCCTCCCCTCCCGCTTCCGCCTCTCCTCCTCCGCGTCCTCCTCCTCCCGACGCCGCGCGACCGGTGCCGCATCCGCATCCGCGGGCGCGGGCGCGGGGAAGGGGAAGGGGAAGGGGGGCAAGTCCAGCGGGGGGAAGGCGGCGGCCGCGGCGGCGGCGGGAGGAGCGGCCATGTCGGCCTCGGCGGGTGGGGGTGGAGGTGGGGGAGGGAAGCGGACGGTGGCGGATGTGCTGATGGGGAACGCGCGGGACGCGGCGAGGAAGGCGAAGAAGGGGGCGGCGCAGTCGCCGAAGAAGCTGAAGACGCAGCCCCAGCCCGCCGCGGAGGCGGATGGCGGCGCGGTGGCGAAGCCGGAGGAGAAGCCGCATTCGCCGGTGAAGCCCAAGCGGTCGTCCTCGCCGACTAAGTCCAACTCGCCAGGTGAGGGGAAGAGGTCCGAATCGGTGGCTGCTGGCGCGAAACCGGAGGCGAAGGAGAAGCCCTCGCCGAAGAAGCCTAAAACCCTAGGTGCCAAATCCGACACCAAGTCCTCCGCGGAAGGCGTTGAGAAGGAGAAGAGGAGGTCACCATCTCCGACGAAGGCAAAAGCGCTAGCTTCTGAATCCCAGGACATAAAGAAGCCCTCCTCACCTAAGAAGACCAAAGCCTTGGATGCCCCCAAGTCTGAGGAAAAGGACACCACCCTCGAGCTCAAGAAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGGGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTATTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGTCGAAGATGAGGATTGGGTTGGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTTGGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGTCTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGATACATTGCCTGGAAGATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGATGTTGTTGATGCGGTTTCTAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGTGAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGATACTTAGCACACGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTTGATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCAT GGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGTTGTGCTTTCATTTTTTTTAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT ]
[+] EMBL CB634345 [ ACACCACCCTCGAGCTCAAGAAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGAGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTCTTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGTCGAAGATGAGGATTGGGTTAGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGGTCCTG ]
[+] EMBL AU030175 [ TGAAAGTTCGACGAGAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGGAGAGGGAAACGTACAGGTGTATATGGGTCATTCCTCCTGGCATGTTACGATGAGCAGACCGANGAATACCCAACAATCTG ]
[+] EMBL AU095025 [ ATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTAAAAAAA]
consensusID : consensus_10119#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 959 fasta sequence
[AATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGCATACTATANNTTTGCTGACACNNTGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATTTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTTTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCGCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTTAAAAAAAATCCAT]
[+] EMBL AI978542 [AATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGCATACTATANNTTTGCTGACACNNTGG ]
[-] EMBL CB634346 [ tgGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATTTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTTTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCGCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTTAAAAAAAATCCAT]
consensusID : consensus_10119#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 709 fasta sequence
[GAGCTTGTTATCTGAAAGCACGTGCCGTTTGAAGGATTTATTTATTCATCCTTCTACAAACAGCTGATATACTACTTGTTTTTTTGCTTTTCACAATACCAAGATAACATTCCTGAATGCAACTGTCCCCTATACCATTCTTGACCTCTAAAAGAACACCTCAGTTCCTTAGCGTTCGGAATACGCCAAGTTAGTAATAATAAGCAAAATTACCAAATTTAGTGCTTAACAAATGGAATTACCGCTTAACTTACCCTTCCCCTGAGAGACCAATACCGCTTGACTTGATAAAAACTTCTATTTTTATTTATTCTTGAGGTTCACTTGTTTAACAGATTACACCTAGTTAGCTTTCTGTTTGGGTTGATGTAATATTGTTCCTAACCAGTCATGTTCGGTGTCACAGTTTTTTGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT]
[+] EMBL AK058561 [GAGCTTGTTATCTGAAAGCACGTGCCGTTTGAAGGATTTATTTATTCATCCTTCTACAAACAGCTGATATACTACTTGTTTTTTTGCTTTTCACAATACCAAGATAACATTCCTGAATGCAACTGTCCCCTATACCATTCTTGACCTCTAAAAGAACACCTCAGTTCCTTAGCGTTCGGAATACGCCAAGTTAGTAATAATAAGCAAAATTACCAAATTTAGTGCTTAACAAATGGAATTACCGCTTAACTTACCCTTCCCCTGAGAGACCAATACCGCTTGACTTGATAAAAACTTCTATTTTTATTTATTCTTGAGGTTCACTTGTTTAACAGATTACACCTAGTTAGCTTTCTGTTTGGGTTGATGTAATATTGTTCCTAACCAGTCATGTTCGGTGTCACAGTTTTTTGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10119#0 TTCCTCCTCCGCGCCACCGCCACCTCCACCTCCACCGCCGCCTCCGCCGCCGCCGCCTCG 60
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CTCCTCCTCCGATGCCACCACCCGCTCTCCCCGCCGCCTAGAACCCTAGCCCTCGCCCTC 120
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CCCGCTCGCCCTCCCCCCGCCCTCCTCCTCCCCTCCCGCTTCCGCCTCTCCTCCTCCGCG 180
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 TCCTCCTCCTCCCGACGCCGCGCGACCGGTGCCGCATCCGCATCCGCGGGCGCGGGCGCG 240
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GGGAAGGGGAAGGGGAAGGGGGGCAAGTCCAGCGGGGGGAAGGCGGCGGCCGCGGCGGCG 300
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GCGGGAGGAGCGGCCATGTCGGCCTCGGCGGGTGGGGGTGGAGGTGGGGGAGGGAAGCGG 360
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 ACGGTGGCGGATGTGCTGATGGGGAACGCGCGGGACGCGGCGAGGAAGGCGAAGAAGGGG 420
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GCGGCGCAGTCGCCGAAGAAGCTGAAGACGCAGCCCCAGCCCGCCGCGGAGGCGGATGGC 480
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GGCGCGGTGGCGAAGCCGGAGGAGAAGCCGCATTCGCCGGTGAAGCCCAAGCGGTCGTCC 540
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 TCGCCGACTAAGTCCAACTCGCCAGGTGAGGGGAAGAGGTCCGAATCGGTGGCTGCTGGC 600
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GCGAAACCGGAGGCGAAGGAGAAGCCCTCGCCGAAGAAGCCTAAAACCCTAGGTGCCAAA 660
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 TCCGACACCAAGTCCTCCGCGGAAGGCGTTGAGAAGGAGAAGAGGAGGTCACCATCTCCG 720
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 ACGAAGGCAAAAGCGCTAGCTTCTGAATCCCAGGACATAAAGAAGCCCTCCTCACCTAAG 780
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 AAGACCAAAGCCTTGGATGCCCCCAAGTCTGAGGAAAAGGACACCACCCTCGAGCTCAAG 840
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 AAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTG 900
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CCGTTCCTGTTCCTCGCTCGGGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTT 960
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 ATCACGGAGATCCTATCGAATGTATTCCGCACGGTGATTGCCACAACACCAGAGGATCTC 1020
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTT 1080
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAG 1140
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGG 1200
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 TTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAA 1260
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 TTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATC 1320
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 AAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAG 1380
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 TCGAAGATGAGGATTGGGTTGGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCT 1440
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCA 1500
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 AAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATT 1560
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTT 1620
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGT 1680
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGATACATTGCCTGGAA 1740
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGAT 1800
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GTTGTTGATGCGGTTTCTAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGT 1860
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGATACTTAGCACA 1920
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTT 1980
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAG 2040
consensus_10119#1 ------------------------------------------------------------
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACA 2100
consensus_10119#1 -----------------------------------------------------AATTACA 7
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 TCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAA 2160
consensus_10119#1 TCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGTTGTGAA 67
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 GGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAAC 2220
consensus_10119#1 GGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAAC 127
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 AATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTG 2280
consensus_10119#1 AATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTG 187
consensus_10119#2 ------------------------------------------------------------
consensus_10119#0 CCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTG 2340
consensus_10119#1 CCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTG 247
consensus_10119#2 -------GAGCTTGTTATCTGAAAGCACGTGCCGTTTGAAGGATTTATTTATTCATCCTT 53
** * * ** ** ** * * * * **** ****
consensus_10119#0 GCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTT 2400
consensus_10119#1 GCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTT 307
consensus_10119#2 CTACAA-ACAGCTGATATACTACTTGTTTTTTTGCTTTTCACAATACCAAGATAACATTC 112
* ** * * * * * *** * * ***
consensus_10119#0 TCTGA-GCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACC 2459
consensus_10119#1 TCTGA-GCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACC 366
consensus_10119#2 CTGAATGCAACTGTCCCCTATACCATTCTTGA-CCTCTAAA--AGAACACC-TCAGTTCC 168
* ***** * * * *** *** ** * * ** ** **
consensus_10119#0 AAAGTTGTGCTTTCATTTTTTTTAGGCATACTATAGGTTTGCTGACACAATGGACCCAGA 2519
consensus_10119#1 AAAG---------------------GCATACTATANNTTTGCTGACACNNTGGACCCAGA 405
consensus_10119#2 TTAGCG---------------TTCGGAATACGCCAAGTTAGT---AATAATAAGCAAAAT 210
** * **** * ** * * * * *
consensus_10119#0 TGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCC 2579
consensus_10119#1 TGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCC 465
consensus_10119#2 TACCAAATTTAGTGCTTAACAAAT----GGAATTACCGCT--TAACTTA---------CC 255
* *** *** * * * * * * *** * * ** **
consensus_10119#0 TGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCC 2639
consensus_10119#1 TGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCC 525
consensus_10119#2 CTTCCCCTGAGAGACCAATACCGC--TTGACTTGA-TAAAAACTTCTATT-----TTTAT 307
* * * * ***** **** ** ** * *** ***
consensus_10119#0 TCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGT 2699
consensus_10119#1 TCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATTTGAGCAAGT 585
consensus_10119#2 TTATTCTTGAGGTTCACTTGTT--TAACAGATTACACCTAGTTAGC-TTTCTGTTTGGGT 364
* * * * ** * ** * *** * * * * * * * * ** **
consensus_10119#0 TGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGA 2759
consensus_10119#1 TGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGA 645
consensus_10119#2 TGATGTAA--TATTGTTCCTAACCAGT-CATGTTCGGTGTCACAGTTTTT-TGATGAGGA 420
** ** * ** ** * ** * * * * *** * *********
consensus_10119#0 TGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACA 2819
consensus_10119#1 TGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTTTGATTGGTTGACA 705
consensus_10119#2 TGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACA 480
********************************************** *************
consensus_10119#0 TGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTT-CACACGCTAAATCC 2878
consensus_10119#1 TGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTTCACACGCTAAATCC 765
consensus_10119#2 TGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTT-CACACGCTAAATCC 539
********************************************* **************
consensus_10119#0 AAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGT 2938
consensus_10119#1 AAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCGCGTGT 825
consensus_10119#2 AAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGT 599
****************************************************** *****
consensus_10119#0 GGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACC 2998
consensus_10119#1 GGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACC 885
consensus_10119#2 GGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACC 659
************************************************************
consensus_10119#0 CTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTT 3058
consensus_10119#1 CTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTT 945
consensus_10119#2 CTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT---------- 709
**************************************************
consensus_10119#0 AAAAAAA------- 3065
consensus_10119#1 TAAAAAAAATCCAT 959
consensus_10119#2 --------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||