|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10197#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2450 fasta sequence
[TTTATACCATTTCCGCGTCCCCCCACCCTCCTCCCCCGCTTTCCCAATCGAGGCGAGCACCGCAATTGCAGGGTTCCGGAGGCCGAATAAAAAAGTTTGGCCTCTCCCCGCAAAAAAGTAAAAAACCCAAAACAACCATCCACCAGCGCATCGCGGCACCGCGAGCGAGCGAGCGGAGGGAGGGAGGTGGAGAGCAAAAGTTCGATAAAAGGAGAGGAGGAGACGAAGCGTCGAAGCCCAAGTAACATCCCCCCAACCTCCGCCTCCTCCTCCTCCCCCTCCTCCCATGCCCGCATCGAGATCTTAGCCGCGCCGGAGATCGAGAGGGAGGAGCGGCGACGCGGGCGCCCCCGATCCCTCCTCCTCGCCGCCGCCGCCGCCGGCGGCGCCGGAGCAGCAGCAGCCGACGACGACGACGACCGCCGCAGCAGCCGATCGGGGGAGGAGGGGAGGGGAGGACGCGATGGAGGCGGACTCCGGGAAGCTCTTCGTCGGCGGCATCTCGTGGGAGACGGACGAGGACCGCCTCCGCGAGTACTTCAGCCGGTTCGGGGAGGTCACCGAGGCCGTCATCATGCGGGACCGCAACACCGGCCGCGCCCGTGGGTTCGGCTTCGTGGTCTTCACCGACGCAGGCGTCGCCGAGCGGGTCACCATGGATAAGCACATGATCGACGGGCGCATGGTGGAAGCGAAGAAAGCTGTTCCCAGGGACGACCAGAGCATCACCAGCAAGAACAATGGCAGCAGCATAGGGTCACCTGGACCAGGCCGTACTAGAAAGATCTTTGTTGGAGGCTTGGCCTCTAATGTTACTGAGGTTGAATTTAGAAGGTATTTTGAGCAATTTGGTGTGATTACGGATGTGGTTGTCATGTACGACCACAACACGCAGAGGCCTAGGGGCTTTGGATTCATCACCTATGACTCAGAAGATGCGGTGGACAAGGCACTGCACAAGAACTTCCATGAGCTGAATGGTAAGATGGTTGAGGTCAAGAGAGCTGTTCCAAAGGAGCAATCACCTGGACCTGCTGCACGTTCACCTGCGGGAGGGCAGAACTATGCTATGAGCAGGGTCCATAGCTTCTTGAATGGTTTCAACCAGGGTTATAACCCAAACCCTATTGGAGGTTATGGCATGAGGGTTGATGGAAGGTATGGTCTGCTTACAGGCGCACGGAATGGATTCTCTTCATTTGGCCCTGGTTATGGAATGGGCATGAATTCTGAATCTGGGATGAATGCGAATTTTGGCGCCAATTCTAGTTTTGTCAATAACTCCAATGGGCGGCAGATAGGTTCATTCTACAATGGTAGTTCAAACAGATTAGGTAGTCCTATTGGTTATGTTGGTCTTAATGATGATTCAGGATCACTATTGAGTTCAATGTCAAGGAATGTTTGGGGTAATGAAAATCTGAACTACCCAAACAACCCCACAAACATGAGTTCTTTTGCACCATCTGGAACTGGAGGTCAAATGGGTATTACCAGTGACGGTATTAATTGGGGAGGGCCTACTCCTGGCCATGGAATGGGCAACATTTCAAGCCTTGGGCTGGCTAACCTTGGCCGTGGAGCTGGAGACAGTTTTGGCTTGCCTTCTGGCAGCTATGGAAGGAGCAATGCAACTGGTACCATTGGTGAACCCTTCTCTGCACCACCCAATGCATATGAAGTGAACAATGCAGATACATATGGCAGCAGCTCCATTTATGGAGACTCAACTTGGAGGTTCACGTCATCTGAGATTGATATGCCTCCTTTTGGTAATGACCTTGGAAATGTTGATCCAGATATCAAATCAAACATACCAGCAAGTTACATGGGCAACTATACTGTTAATAATAATCAGACAAGCAGAGGTATCACTTCCTAGCGAGAGTACTATTATATTCATATATGACTTGGGATAGATGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTAATATACGGGTTAGTTAATTGTTTCTAGCTAACCAGAGGTGTGGTTTATGGACACCACCATGCTAGAGGAGCGAATACAAACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGTGGTGATTGCGGCACATACTTAGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAACTTGTATACCAAAGGAATGCTTTATTATCTTGCCCATTTATGGCTACATTAGCTCGCTTGTTTTCATTCCCTTTTTAACCAATTCCATTTGTATACTAGAGATCTGCTTGACTTACTAGTGAAACTATTCGGGGACGCCGATCCTATCTTTGCAGTTGGCTCCCAGAAATAAAGCCACCAAAAGTGCATACTTATTTGTTCTACCTTGATTTGCCATATGTATATGCTTCTGTTCGTTTTAAAATAGAACTTT]
[+] EMBL AK067725 [TTTATACCATTTCCGCGTCCCCCCACCCTCCTCCCCCGCTTTCCCAATCGAGGCGAGCACCGCAATTGCAGGGTTCCGGAGGCCGAATAAAAAAGTTTGGCCTCTCCCCGCAAAAAAGTAAAAAACCCAAAACAACCATCCACCAGCGCATCGCGGCACCGCGAGCGAGCGAGCGGAGGGAGGGAGGTGGAGAGCAAAAGTTCGATAAAAGGAGAGGAGGAGACGAAGCGTCGAAGCCCAAGTAACATCCCCCCAACCTCCGCCTCCTCCTCCTCCCCCTCCTCCCATGCCCGCATCGAGATCTTAGCCGCGCCGGAGATCGAGAGGGAGGAGCGGCGACGCGGGCGCCCCCGATCCCTCCTCCTCGCCGCCGCCGCCGCCGGCGGCGCCGGAGCAGCAGCAGCCGACGACGACGACGACCGCCGCAGCAGCCGATCGGGGGAGGAGGGGAGGGGAGGACGCGATGGAGGCGGACTCCGGGAAGCTCTTCGTCGGCGGCATCTCGTGGGAGACGGACGAGGACCGCCTCCGCGAGTACTTCAGCCGGTTCGGGGAGGTCACCGAGGCCGTCATCATGCGGGACCGCAACACCGGCCGCGCCCGTGGGTTCGGCTTCGTGGTCTTCACCGACGCAGGCGTCGCCGAGCGGGTCACCATGGATAAGCACATGATCGACGGGCGCATGGTGGAAGCGAAGAAAGCTGTTCCCAGGGACGACCAGAGCATCACCAGCAAGAACAATGGCAGCAGCATAGGGTCACCTGGACCAGGCCGTACTAGAAAGATCTTTGTTGGAGGCTTGGCCTCTAATGTTACTGAGGTTGAATTTAGAAGGTATTTTGAGCAATTTGGTGTGATTACGGATGTGGTTGTCATGTACGACCACAACACGCAGAGGCCTAGGGGCTTTGGATTCATCACCTATGACTCAGAAGATGCGGTGGACAAGGCACTGCACAAGAACTTCCATGAGCTGAATGGTAAGATGGTTGAGGTCAAGAGAGCTGTTCCAAAGGAGCAATCACCTGGACCTGCTGCACGTTCACCTGCGGGAGGGCAGAACTATGCTATGAGCAGGGTCCATAGCTTCTTGAATGGTTTCAACCAGGGTTATAACCCAAACCCTATTGGAGGTTATGGCATGAGGGTTGATGGAAGGTATGGTCTGCTTACAGGCGCACGGAATGGATTCTCTTCATTTGGCCCTGGTTATGGAATGGGCATGAATTCTGAATCTGGGATGAATGCGAATTTTGGCGCCAATTCTAGTTTTGTCAATAACTCCAATGGGCGGCAGATAGGTTCATTCTACAATGGTAGTTCAAACAGATTAGGTAGTCCTATTGGTTATGTTGGTCTTAATGATGATTCAGGATCACTATTGAGTTCAATGTCAAGGAATGTTTGGGGTAATGAAAATCTGAACTACCCAAACAACCCCACAAACATGAGTTCTTTTGCACCATCTGGAACTGGAGGTCAAATGGGTATTACCAGTGACGGTATTAATTGGGGAGGGCCTACTCCTGGCCATGGAATGGGCAACATTTCAAGCCTTGGGCTGGCTAACCTTGGCCGTGGAGCTGGAGACAGTTTTGGCTTGCCTTCTGGCAGCTATGGAAGGAGCAATGCAACTGGTACCATTGGTGAACCCTTCTCTGCACCACCCAATGCATATGAAGTGAACAATGCAGATACATATGGCAGCAGCTCCATTTATGGAGACTCAACTTGGAGGTTCACGTCATCTGAGATTGATATGCCTCCTTTTGGTAATGACCTTGGAAATGTTGATCCAGATATCAAATCAAACATACCAGCAAGTTACATGGGCAACTATACTGTTAATAATAATCAGACAAGCAGAGGTATCACTTCCTAGCGAGAGTACTATTATATTCATATATGACTTGGGATAGATGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTAATATACGGGTTAGTTAATTGTTTCTAGCTAACCAGAGGTGTGGTTTATGGACACCACCATGCTAGAGGAGCGAATACAAACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGTGGTGATTGCGGCACATACTTAGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAACTTGTATACCAAAGGAATGCTTTATTATCTTGCCCATTTATGGCTACATTAGCTCGCTTGTTTTCATTCCCTTTTTAACCAATTCCATTTGTATACTAGAGATCTGCTTGACTTACTAGTGAAACTATTCGGGGACGCCGATCCTATCTTTGCAGTTGGCTCCCAGAAATAAAGCCACCAAAAGTGCATACTTATTTGTTCTACCTTGATTTGCCATATGTATATGCTTCTGTTCGTTTTAAAATAGAACTTT]
consensusID : consensus_10197#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1992 fasta sequence
[TTGCGTTTGTGGATTGCAGGGGGAGGAGGGGAGGGGAGGACGCGATGGAGGCGGACTCCGGGAAGCTCTTCGTCGGCGGCATCTCGTGGGAGACGGACGAGGACCGCCTCCGCGAGTACTTCAGCCGGTTCGGGGAGGTCACCGAGGCCGTCATCATGCGGGACCGCAACACCGGCCGCGCCCGTGGGTTCGGCTTCGTGGTCTTCACCGACGCAGGCGTCGCAGCGGGTCACCATGGATAAGCACATGATCGACGGGCGCATGGTGGAAGCGAAGAAAGCTGTTCCCAGGGACGACCAGAGCATCACCAGCAAGAACAATGGCAGCAGCATAGGGTCACCTGGACCAGGCCGTACTAGAAAGATCTTTGTTGGAGGCTTGGCCTCTAATGTTACTGAGGTTGAATTTAGAAGGTATTTTGAGCAATTTGGTGTGATTACGGATGTGGTTGTCATGTACGACCACAACACGCAGAGGCCTAGGGGCTTTGGATTCATCACCTATGACTCAGAAGATGCGGTGGACAAGGCACTGCACAAGAACTTCCATGAGCTGAATGGTAAGATGGT-TGAGGTCAAGAGAGCTGTTCCAAAGGAGCAATCACCTGGACCTGCTGCACGTTCACCTGCGGGAGGGCAGAACTATGCTATGAGCAGGGTCCATAGCTTCTTGAATGGTTTCAACCAGGGTTATAACCCAAACCCTATTGGAGGTTATGGCATGAGGGTTGATGGAAGGTATGGTCTGCTTACAGGCGCACGGAATGGATTCTCTTCATTTGGCCCTGGTTATGGAATGGGCATGAATTCTGAATCTGGGATGAATGCGAATTTTGGCGCCAATTCTAGTTTTGTCAATAACTCCAATGGGCGGCAGATAGGTTCATTCTACAATGGTAGTTCAAACAGATTAGGTAGTCCTATTGGTTATGTTGGTCTTAATGATGATTCAGGATCACTATTGAGTTCAATGTCAAGGAATGTTTGGGGTAATGAAAATCTGAACTACCCAAACAACCCCACAAACATGAGTTCTTTTGCACCATCTGGAACTGGAGGTCAAATGGGTATTACCAGTGACGGTATTAATTGGGGAGGGCCTACTCCTGGCCATGGAATGGGCAACATTTCAAGCCTTGGGCTGGCTAACCTTGGCCGTGGAGCTGGAGACAGTTTTGGCTTGCCTTCTGGCAGCTATGGAAGGAGCAATGCAACTGGTACCATTGGTGAACCCTTCTCTGCACCACCCAATGCATATGAAGTGAACAATGCAGATACATATGGCAGCAGCTCCATTTATGGAGACTCAACTTGGAGGTTCACGTCATCTGAGATTGATATGCCTCCTTTTGGTAATGACCTTGGAAATGTTGATCCAGATATCAAATCAAACATACCAGCAAGTTACATGGGCAACTATACTGTTAATAATAATCAGACAAGCAGAGGTATCACTTCCTAGCGAGAGTACTATTATATTCATATATGACTTGGGATAGATGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTAATATACGGGTTAGTTAATTGTTTCTAGCTAACCAGAGGTGTGGTTTATGGACACCACCATGCTAGAGGAGCGAATACAAACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGT-GGTGATTGCGGCACATACTTAGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAAC-TTGTATACCAAAGGAATGCTTTATTATCTTGCCCATTTATGGCTACATTAGCTCGCTTGTTTTCATTCCCTTTTTAACCAATTCCATTTGTATACTAGAGATCTGCTTGACTTACTAGTGAAACTATTCGGGGACGCCGATCCTATCTTTGCAGTTGGCTCCCAGAAATAAAGCCACCAAAAGTACAAAAAAAAAAAAAAAAAAACTCGAGACTA]
[+] EMBL AK121109 [TTGCGTTTGTGGATTGCAGGGGGAGGAGGGGAGGGGAGGACGCGATGGAGGCGGACTCCGGGAAGCTCTTCGTCGGCGGCATCTCGTGGGAGACGGACGAGGACCGCCTCCGCGAGTACTTCAGCCGGTTCGGGGAGGTCACCGAGGCCGTCATCATGCGGGACCGCAACACCGGCCGCGCCCGTGGGTTCGGCTTCGTGGTCTTCACCGACGCAGGCGTCGCAGCGGGTCACCATGGATAAGCACATGATCGACGGGCGCATGGTGGAAGCGAAGAAAGCTGTTCCCAGGGACGACCAGAGCATCACCAGCAAGAACAATGGCAGCAGCATAGGGTCACCTGGACCAGGCCGTACTAGAAAGATCTTTGTTGGAGGCTTGGCCTCTAATGTTACTGAGGTTGAATTTAGAAGGTATTTTGAGCAATTTGGTGTGATTACGGATGTGGTTGTCATGTACGACCACAACACGCAGAGGCCTAGGGGCTTTGGATTCATCACCTATGACTCAGAAGATGCGGTGGACAAGGCACTGCACAAGAACTTCCATGAGCTGAATGGTAAGATGGT TGAGGTCAAGAGAGCTGTTCCAAAGGAGCAATCACCTGGACCTGCTGCACGTTCACCTGCGGGAGGGCAGAACTATGCTATGAGCAGGGTCCATAGCTTCTTGAATGGTTTCAACCAGGGTTATAACCCAAACCCTATTGGAGGTTATGGCATGAGGGTTGATGGAAGGTATGGTCTGCTTACAGGCGCACGGAATGGATTCTCTTCATTTGGCCCTGGTTATGGAATGGGCATGAATTCTGAATCTGGGATGAATGCGAATTTTGGCGCCAATTCTAGTTTTGTCAATAACTCCAATGGGCGGCAGATAGGTTCATTCTACAATGGTAGTTCAAACAGATTAGGTAGTCCTATTGGTTATGTTGGTCTTAATGATGATTCAGGATCACTATTGAGTTCAATGTCAAGGAATGTTTGGGGTAATGAAAATCTGAACTACCCAAACAACCCCACAAACATGAGTTCTTTTGCACCATCTGGAACTGGAGGTCAAATGGGTATTACCAGTGACGGTATTAATTGGGGAGGGCCTACTCCTGGCCATGGAATGGGCAACATTTCAAGCCTTGGGCTGGCTAACCTTGGCCGTGGAGCTGGAGACAGTTTTGGCTTGCCTTCTGGCAGCTATGGAAGGAGCAATGCAACTGGTACCATTGGTGAACCCTTCTCTGCACCACCCAATGCATATGAAGTGAACAATGCAGATACATATGGCAGCAGCTCCATTTATGGAGACTCAACTTGGAGGTTCACGTCATCTGAGATTGATATGCCTCCTTTTGGTAATGACCTTGGAAATGTTGATCCAGATATCAAATCAAACATACCAGCAAGTTACATGGGCAACTATACTGTTAATAATAATCAGACAAGCAGAGGTATCACTTCCTAGCGAGAGTACTATTATATTCATATATGACTTGGGATAGATGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTAATATACGGGTTAGTTAATTGTTTCTAGCTAACCAGAGGTGTGGTTTATGGACACCACCATGCTAGAGGAGCGAATACAAACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGT GGTGATTGCGGCACATACTTAGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAAC TTGTATACCAAAGGAATGCTTTATTATCTTGCCCATTTATGGCTACATTAGCTCGCTTGTTTTCATTCCCTTTTTAACCAATTCCATTTGTATACTAGAGATCTGCTTGACTTACTAGTGAAACTATTCGGGGACGCCGATCCTATCTTTGCAGTTGGCTCCCAGAAATAAAGCCA ]
[+] EMBL CF323386 [ ATCGACGGGCGCATGGTGGAAGCGAAGAAAGCTGTTCCCAGGGACGACCAGAGCATCACCAGCAAGAACAATGGCAGCAGCATAGGGTCACCTGGACCAGGCCGTACTAGAAAGATCTTTGTTGGAGGCTTGGCCTCTAATGTTACTGAGGTTGAATTTAGAAGGTATTTTGAGCAATTTGGTGTGATTACGGATGTGGTTGTCATGTACGACCACAACACGCAGAGGCCTAGGGGCTTTGGATTCATCACCTATGACTCAGAAGATGCGGTGGACAAGGCACTGCACAAGAACTTCCATGAGCTGAATGGTAAGATGGTNTGAGGTCAAGAGAGCTGTTCCAAAGGAGCAATCACCTGGACCTGCTGCACGTTCACCTGCGGGAGGGCAGAACTATGCTATGAGCAGGGTCCATAGCTTCTTGAATGGTTTCAACCAGGGTTATA ]
[+] EMBL AU063159 [ ACATGGGCAACTATACTGTTAATAATAATCAGACAAGCAGAGGTATCACTTCCTAGCGAGAGTACTATTATATTCATATATGACTTGGGATAGATGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTAATATACGGGTTAGTTAATTGTTTCTAGCTAACCAGAGGTGTGGTTTATGGACACCACCATGCTAGAGGAGCGAATACAAACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGTNGGTGATTGCGGCACATACTTAGAGTGTTCCAACATAAGCTGGGATCCTGTCATATGGACAAACTTTGTATACCCAAGGAATGCTTTATTATCTTGCCCATTat ]
[+] EMBL CA754546 [ TATTCATATATGACTTGGGATAGATGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTAATATACGGGTTAGTTAATTGTTTCTAGCTAACCAGAGGTGTGGTTTATGGACACCACCATGCTAGAGGAGCGAATACAAACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGT GGTGATTGCGGCACATACTTAGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAAC TTGTATACCAAAGGAATGCTTTATTATCTTGCCCATTTATGGCTACATTAGCTCGCTTGTTTTCATTCCCTTTTTAACCAATTCCATTTGTATACTAGAGATCTGCTTGACTTACTAGTGAAACTATTCGGGGACGCCGATCCTATCTTTGCAGTTGGCTCCCAGAAATAAAGCCACCAAAAGTACAAAAAAAAAAAAAAAAAAACTCGAGACTA]
[+] EMBL CA766150 [ CATGCTAGAGGAGCGAATACAAACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGT GGTGATTGCGGCACATACTTAGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAAC TTGTATACCAAAGGAATGCTTTATTATCTTGCCCATTTATGGCTA ]
consensusID : consensus_10197#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 293 fasta sequence
[TGTGGGTGAATATCCAGGGTAAATATACGGGGGTAGTTAATGGTGTTCTGAGCGTAACCAGAGGTGTGTTTTATGGACACCCCCATGCTAGAGGAGCGAATACAACGTGTTGTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTCCAGTGGTGATTGCGGCACATACTTAGAGTGTTCCACATAAGCTGGAATCCTGTCATATGGACAAACTTGTATACCAAGGAATGCTTTATTATCTGGCCCATTTATGCCCACATGA]
[+] EMBL BI809059 [TGTGGGTGAATATCCAGGGTAAATATACGGGGGTAGTTAATGGTGTTCTGAGCGTAACCAGAGGTGTGTTTTATGGACACCCCCATGCTAGAGGAGCGAATACAACGTGTTGTGTGAAGGTTTCAGATTTTAGTTTAATTCCTACATGTATTAGGTCTTGGTTTTTGAATGAGATGTCCAGTGGTGATTGCGGCACATACTTAGAGTGTTCCACATAAGCTGGAATCCTGTCATATGGACAAACTTGTATACCAAGGAATGCTTTATTATCTGGCCCATTTATGCCCACATGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10197#0 TTTATACCATTTCCGCGTCCCCCCACCCTCCTCCCCCGCTTTCCCAATCGAGGCGAGCAC 60
consensus_10197#1 ------------------------------------------------------------
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CGCAATTGCAGGGTTCCGGAGGCCGAATAAAAAAGTTTGGCCTCTCCCCGCAAAAAAGTA 120
consensus_10197#1 ------------------------------------------------------------
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 AAAAACCCAAAACAACCATCCACCAGCGCATCGCGGCACCGCGAGCGAGCGAGCGGAGGG 180
consensus_10197#1 ------------------------------------------------------------
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 AGGGAGGTGGAGAGCAAAAGTTCGATAAAAGGAGAGGAGGAGACGAAGCGTCGAAGCCCA 240
consensus_10197#1 ------------------------------------------------------------
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 AGTAACATCCCCCCAACCTCCGCCTCCTCCTCCTCCCCCTCCTCCCATGCCCGCATCGAG 300
consensus_10197#1 ------------------------------------------------------------
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 ATCTTAGCCGCGCCGGAGATCGAGAGGGAGGAGCGGCGACGCGGGCGCCCCCGATCCCTC 360
consensus_10197#1 ------------------------------------------------------------
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CTCCTCGCCGCCGCCGCCGCCGGCGGCGCCGGAGCAGCAGCAGCCGACGACGACGACGAC 420
consensus_10197#1 -----------------------------------------------------------T 1
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CGCCGCAGCAGCCGATCGGGGGAGGAGGGGAGGGGAGGACGCGATGGAGGCGGACTCCGG 480
consensus_10197#1 TGCGTTTGTGGATTGCAGGGGGAGGAGGGGAGGGGAGGACGCGATGGAGGCGGACTCCGG 61
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 GAAGCTCTTCGTCGGCGGCATCTCGTGGGAGACGGACGAGGACCGCCTCCGCGAGTACTT 540
consensus_10197#1 GAAGCTCTTCGTCGGCGGCATCTCGTGGGAGACGGACGAGGACCGCCTCCGCGAGTACTT 121
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CAGCCGGTTCGGGGAGGTCACCGAGGCCGTCATCATGCGGGACCGCAACACCGGCCGCGC 600
consensus_10197#1 CAGCCGGTTCGGGGAGGTCACCGAGGCCGTCATCATGCGGGACCGCAACACCGGCCGCGC 181
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CCGTGGGTTCGGCTTCGTGGTCTTCACCGACGCAGGCGTCGCCGAGCGGGTCACCATGGA 660
consensus_10197#1 CCGTGGGTTCGGCTTCGTGGTCTTCACCGACGCAGGCGTCGC--AGCGGGTCACCATGGA 239
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TAAGCACATGATCGACGGGCGCATGGTGGAAGCGAAGAAAGCTGTTCCCAGGGACGACCA 720
consensus_10197#1 TAAGCACATGATCGACGGGCGCATGGTGGAAGCGAAGAAAGCTGTTCCCAGGGACGACCA 299
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 GAGCATCACCAGCAAGAACAATGGCAGCAGCATAGGGTCACCTGGACCAGGCCGTACTAG 780
consensus_10197#1 GAGCATCACCAGCAAGAACAATGGCAGCAGCATAGGGTCACCTGGACCAGGCCGTACTAG 359
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 AAAGATCTTTGTTGGAGGCTTGGCCTCTAATGTTACTGAGGTTGAATTTAGAAGGTATTT 840
consensus_10197#1 AAAGATCTTTGTTGGAGGCTTGGCCTCTAATGTTACTGAGGTTGAATTTAGAAGGTATTT 419
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TGAGCAATTTGGTGTGATTACGGATGTGGTTGTCATGTACGACCACAACACGCAGAGGCC 900
consensus_10197#1 TGAGCAATTTGGTGTGATTACGGATGTGGTTGTCATGTACGACCACAACACGCAGAGGCC 479
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TAGGGGCTTTGGATTCATCACCTATGACTCAGAAGATGCGGTGGACAAGGCACTGCACAA 960
consensus_10197#1 TAGGGGCTTTGGATTCATCACCTATGACTCAGAAGATGCGGTGGACAAGGCACTGCACAA 539
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 GAACTTCCATGAGCTGAATGGTAAGATGGTTGAGGTCAAGAGAGCTGTTCCAAAGGAGCA 1020
consensus_10197#1 GAACTTCCATGAGCTGAATGGTAAGATGGTTGAGGTCAAGAGAGCTGTTCCAAAGGAGCA 599
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 ATCACCTGGACCTGCTGCACGTTCACCTGCGGGAGGGCAGAACTATGCTATGAGCAGGGT 1080
consensus_10197#1 ATCACCTGGACCTGCTGCACGTTCACCTGCGGGAGGGCAGAACTATGCTATGAGCAGGGT 659
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CCATAGCTTCTTGAATGGTTTCAACCAGGGTTATAACCCAAACCCTATTGGAGGTTATGG 1140
consensus_10197#1 CCATAGCTTCTTGAATGGTTTCAACCAGGGTTATAACCCAAACCCTATTGGAGGTTATGG 719
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CATGAGGGTTGATGGAAGGTATGGTCTGCTTACAGGCGCACGGAATGGATTCTCTTCATT 1200
consensus_10197#1 CATGAGGGTTGATGGAAGGTATGGTCTGCTTACAGGCGCACGGAATGGATTCTCTTCATT 779
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TGGCCCTGGTTATGGAATGGGCATGAATTCTGAATCTGGGATGAATGCGAATTTTGGCGC 1260
consensus_10197#1 TGGCCCTGGTTATGGAATGGGCATGAATTCTGAATCTGGGATGAATGCGAATTTTGGCGC 839
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CAATTCTAGTTTTGTCAATAACTCCAATGGGCGGCAGATAGGTTCATTCTACAATGGTAG 1320
consensus_10197#1 CAATTCTAGTTTTGTCAATAACTCCAATGGGCGGCAGATAGGTTCATTCTACAATGGTAG 899
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TTCAAACAGATTAGGTAGTCCTATTGGTTATGTTGGTCTTAATGATGATTCAGGATCACT 1380
consensus_10197#1 TTCAAACAGATTAGGTAGTCCTATTGGTTATGTTGGTCTTAATGATGATTCAGGATCACT 959
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 ATTGAGTTCAATGTCAAGGAATGTTTGGGGTAATGAAAATCTGAACTACCCAAACAACCC 1440
consensus_10197#1 ATTGAGTTCAATGTCAAGGAATGTTTGGGGTAATGAAAATCTGAACTACCCAAACAACCC 1019
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CACAAACATGAGTTCTTTTGCACCATCTGGAACTGGAGGTCAAATGGGTATTACCAGTGA 1500
consensus_10197#1 CACAAACATGAGTTCTTTTGCACCATCTGGAACTGGAGGTCAAATGGGTATTACCAGTGA 1079
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CGGTATTAATTGGGGAGGGCCTACTCCTGGCCATGGAATGGGCAACATTTCAAGCCTTGG 1560
consensus_10197#1 CGGTATTAATTGGGGAGGGCCTACTCCTGGCCATGGAATGGGCAACATTTCAAGCCTTGG 1139
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 GCTGGCTAACCTTGGCCGTGGAGCTGGAGACAGTTTTGGCTTGCCTTCTGGCAGCTATGG 1620
consensus_10197#1 GCTGGCTAACCTTGGCCGTGGAGCTGGAGACAGTTTTGGCTTGCCTTCTGGCAGCTATGG 1199
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 AAGGAGCAATGCAACTGGTACCATTGGTGAACCCTTCTCTGCACCACCCAATGCATATGA 1680
consensus_10197#1 AAGGAGCAATGCAACTGGTACCATTGGTGAACCCTTCTCTGCACCACCCAATGCATATGA 1259
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 AGTGAACAATGCAGATACATATGGCAGCAGCTCCATTTATGGAGACTCAACTTGGAGGTT 1740
consensus_10197#1 AGTGAACAATGCAGATACATATGGCAGCAGCTCCATTTATGGAGACTCAACTTGGAGGTT 1319
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CACGTCATCTGAGATTGATATGCCTCCTTTTGGTAATGACCTTGGAAATGTTGATCCAGA 1800
consensus_10197#1 CACGTCATCTGAGATTGATATGCCTCCTTTTGGTAATGACCTTGGAAATGTTGATCCAGA 1379
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TATCAAATCAAACATACCAGCAAGTTACATGGGCAACTATACTGTTAATAATAATCAGAC 1860
consensus_10197#1 TATCAAATCAAACATACCAGCAAGTTACATGGGCAACTATACTGTTAATAATAATCAGAC 1439
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 AAGCAGAGGTATCACTTCCTAGCGAGAGTACTATTATATTCATATATGACTTGGGATAGA 1920
consensus_10197#1 AAGCAGAGGTATCACTTCCTAGCGAGAGTACTATTATATTCATATATGACTTGGGATAGA 1499
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTA 1980
consensus_10197#1 TGAAAGAAGCATTATATCAGGTATTCAGGTGCATGACTATGAATTGGTGATATCAGGTTA 1559
consensus_10197#2 -------------------------------------TGTGGGTGAAT-ATCCAGGGTAA 22
* ** * * ** *** *
consensus_10197#0 ATATACGGGT-TAGTTAAT--TGTTTCTAGC-TAACCAGAGGTGTGGTTTATGGACACCA 2036
consensus_10197#1 ATATACGGGT-TAGTTAAT--TGTTTCTAGC-TAACCAGAGGTGTGGTTTATGGACACCA 1615
consensus_10197#2 ATATACGGGGGTAGTTAATGGTGTTCTGAGCGTAACCAGAGGTGTGTTTTATGGACACCC 82
********* ******** **** *** ************** ************
consensus_10197#0 CCATGCTAGAGGAGCGAATACAA-ACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCC 2095
consensus_10197#1 CCATGCTAGAGGAGCGAATACAA-ACGTTTTGTGAAGGTTTCAGATTTTAGTTTAATTCC 1674
consensus_10197#2 CCATGCTAGAGGAGCGAATACAACGTGTTGTGTGAAGGTTTCAGATTTTAGTTTAATTCC 142
*********************** *** ******************************
consensus_10197#0 TACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGTGGTGATTGCGGCACATACTT 2155
consensus_10197#1 TACATGTATTAGGTCTTGGTTTTTGAATGAGATGTGCAGTGGTGATTGCGGCACATACTT 1734
consensus_10197#2 TACATGTATTAGGTCTTGGTTTTTGAATGAGATGTCCAGTGGTGATTGCGGCACATACTT 202
*********************************** ************************
consensus_10197#0 AGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAACTTGTATACCAAAGGAAT 2215
consensus_10197#1 AGAGTGTTCCAACATAAGCTGGAATCCTGTCATATGGACAAACTTGTATACCAAAGGAAT 1794
consensus_10197#2 AGAGTGTTCCA-CATAAGCTGGAATCCTGTCATATGGACAAACTTGTATACCAA-GGAAT 260
*********** ****************************************** *****
consensus_10197#0 GCTTTATTATCTTGCCCATTTATGGCTACATTAGCTCGCTTGTTTTCATTCCCTTTTTAA 2275
consensus_10197#1 GCTTTATTATCTTGCCCATTTATGGCTACATTAGCTCGCTTGTTTTCATTCCCTTTTTAA 1854
consensus_10197#2 GCTTTATTATCTGGCCCATTTATGCCCACATGA--------------------------- 293
************ *********** * **** *
consensus_10197#0 CCAATTCCATTTGTATACTAGAGATCTGCTTGACTTACTAGTGAAACTATTCGGGGACGC 2335
consensus_10197#1 CCAATTCCATTTGTATACTAGAGATCTGCTTGACTTACTAGTGAAACTATTCGGGGACGC 1914
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 CGATCCTATCTTTGCAGTTGGCTCCCAGAAATAAAGCCACCAAAAGTGCATACTTATTTG 2395
consensus_10197#1 CGATCCTATCTTTGCAGTTGGCTCCCAGAAATAAAGCCACCAAAAGTACAAAAAAAAAAA 1974
consensus_10197#2 ------------------------------------------------------------
consensus_10197#0 TTCTACCTTGATTTGCCATATGTATATGCTTCTGTTCGTTTTAAAATAGAACTTT 2450
consensus_10197#1 AAAAAAAACTCGAGACTA------------------------------------- 1992
consensus_10197#2 -------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||