cluster # 10250

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Oryza sativa
cluster # 10250 cluster # 10250 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10250#0 length = 1113 sequences # 7
consensusID : consensus_10250#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1113
fasta sequence
                              [GTGAGTACAGCATGCCTAAAGAAAAAGGAGGTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC-TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCCAATTACAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATAACAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAGTGTAAAGTTCAGGGAATTGCAGAATTGCATTTCTGAATAGCAGAGCATTTTGTGCATCTCTGAACTTGCAACATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAAGTCCGGATGACGTGGTGGCAGTGAACCCTTTCCT]

[+] EMBL AU085729             [GTGAGTCCAGCNTGCCTAAAGAAAAAGGAGNTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCC ATTACAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATAACAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAGTGTAAAGTTCAGGGAATTGCAGAATTGCATTTCTGAATAGCAGAGCATTTTGTGCATCTCTGAACTTGCAACATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATAaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU077517             [GTGAGTACAGCATGCCTAAAGAAAAAGGAGGTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCCAATTACAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATAACAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C27508               [GTGAGTACAGCATGCCTAAAGAAAAAGGAGGTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAANGAAGCAACGGTACANGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTCTTTTGCCCATGGANGATTTGTCTG ACCNTACATGGCC TCATTTCCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU077518             [                                                                                                                                                                    GAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCCAATTNCAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATANCAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAGTGTAAAGTTCAGGGAATTGCAGAATTGCATTTCTGAATAGCAGAGCATTTTGTGCATCTCTGAACTTGCAACATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATAaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB676920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAAGTCCGGATGACGTGGTGGCAGTGAAC        ]
[-] EMBL AK121698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAA                                  ]
[+] EMBL CB676921             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTTATTCCCCTTCAAAGAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACCAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAAGTCCGGATGACGTGGTGGCAGTGAACCCTTTCCT]




>consensus_10250#0
GTGAGTACAGCATGCCTAAAGAAAAAGGAGGTGCAAACAAAAAGCTCAAAGCGGAAAAGA
AATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAA
AAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAAA
GAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTCTTTGCCC
ATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGG
CCAATTACAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAA
ATATAACAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAGTGTAAAGTTCAGGGAA
TTGCAGAATTGCATTTCTGAATAGCAGAGCATTTTGTGCATCTCTGAACTTGCAACATTC
AGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAG
TCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCA
CTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCG
ACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCT
ATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTC
CTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAG
CAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCC
GGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGC
GCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCG
AGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAAG
TCCGGATGACGTGGTGGCAGTGAACCCTTTCCT
clustalw multiple alignements is not computed in this case