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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10269#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3427 fasta sequence
[CCGCTCCCCCTGCTGCGCCGGAAACAATGAAATCGCCTTCTTTTGTCCCAAACTCTTCTTCTCCTCTCTTCCCCCCAAACACAACTGAACCCAACCCAACAAACCACCACCACGCTGACCGCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACCTCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT--GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGCTGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTGTGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGTCGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAATGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAGTGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGCAACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAAGGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAGCAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCGCAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGAGTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGAACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATATCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCTCCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGATGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATATGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGATGGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTATCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGATCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGCTGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGTGCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGGCATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAGCATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCCTGCCGGGTTTGCAGAATCGTTCACCTCGGCTGATGGCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK121964 [CCGCTCCCCCTGCTGCGCCGGAAACAATGAAATCGCCTTCTTTTGTCCCAAACTCTTCTTCTCCTCTCTTCCCCCCAAACACAACTGAACCCAACCCAACAAACCACCACCACGCTGACCGCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACCTCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGCTGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTGTGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGTCGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAATGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAGTGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGCAACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAAGGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAGCAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCGCAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGAGTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGAACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATATCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCTCCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGATGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATATGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGATGGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTATCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGATCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGCTGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGTGCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGGCATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAGCATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCCTGCCGGGTTTGCAGAATCGTTCACCTCGGCTGATGGCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCA ]
[+] EMBL AK063635 [ TGAACCCAACCCAACAAACCACCACCACGCTGACCGCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACCTCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGC ]
[+] EMBL AY224496 [ CTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAAMGCCGAAGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTTCACCTTTGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACCACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGCTGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTGTGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGTCGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAATGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAGTGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGCAACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAAGGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAGCAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCGCAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGAGTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGAACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATATCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCTCCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGATGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATATGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGATGGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTATCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGATCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGCTGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGTGCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGGCATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAGCATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCCTGCCGGGTTTGCAGAATCGTTCACCTCGGCT ]
[+] EMBL OSS1616A [ GCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGGCGG CTCAAGTCCGTTCAGCTCGACAACAACAATCTCTTTGGGGCC ]
[+] EMBL CF328144 [ ATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10269#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence
[CAGNTGGAAGCATCCTGANCCTTGAGGACAGCAAGGGCAGCATCCCAGNTCGGCCTGCCGGGTTTGCAGAATCGTTCNCCTCGGCTGATGNCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGNCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATNTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTNGTTTNCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU033042 [CAGNTGGAAGCATCCTGANCCTTGAGGACAGCAAGGGCAGCATCCCAGNTCGGCCTGCCGGGTTTGCAGAATCGTTCNCCTCGGCTGATGNCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGNCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATNTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTNGTTTNCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10269#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 301 fasta sequence
[CGAGCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAANATGCATTGTCCATGTGCTTATGCTTCTGTANATANACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAAACTGAANTTTCTGCCTTTTTCTANTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCATATCATGAGTCTTGTNCTGTTTAGGGAGCAATTAGTACCAATCCAGGCTTG]
[+] EMBL AA752009 [CGAGCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAANATGCATTGTCCATGTGCTTATGCTTCTGTANATANACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAAACTGAANTTTCTGCCTTTTTCTANTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCATATCATGAGTCTTGTNCTGTTTAGGGAGCAATTAGTACCAATCCAGGCTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10269#0 CCGCTCCCCCTGCTGCGCCGGAAACAATGAAATCGCCTTCTTTTGTCCCAAACTCTTCTT 60
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CTCCTCTCTTCCCCCCAAACACAACTGAACCCAACCCAACAAACCACCACCACGCTGACC 120
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACC 180
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTT 240
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCT 300
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAA 360
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAA 420
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCT 480
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTT 540
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCC 600
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCT 660
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCA 720
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCAT 780
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCAC 840
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCT 900
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGG 960
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCT 1020
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGG 1080
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTTGGGCCCCGTCCCGGCGATCAAGGC 1140
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTC 1200
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGT 1260
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 AGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGG 1320
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCT 1380
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGT 1440
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCT 1500
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAA 1560
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTC 1620
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGC 1680
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTG 1740
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGT 1800
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAA 1860
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAG 1920
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGC 1980
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 AACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAA 2040
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAG 2100
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCG 2160
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGA 2220
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGA 2280
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 ACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATA 2340
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCT 2400
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGA 2460
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATA 2520
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGAT 2580
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTA 2640
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGA 2700
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGC 2760
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGT 2820
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 GCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGG 2880
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAG 2940
consensus_10269#1 ------------------------------------------------------------
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 CATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCC 3000
consensus_10269#1 -----CAGNTGGAAGCATCCTGANCCTTGAGGACAGCAAGGGCAGCATCCCAGNTCGGCC 55
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 TGCCGGGTTTGCAGAATCGTTCACCTCGGCTGATGGCCGGTGAAGCATCATATATCTACA 3060
consensus_10269#1 TGCCGGGTTTGCAGAATCGTTCNCCTCGGCTGATGNCCGGTGAAGCATCATATATCTACA 115
consensus_10269#2 ------------------------------------------------------------
consensus_10269#0 ATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGG 3120
consensus_10269#1 ATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGG 175
consensus_10269#2 -----------------CGAGCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGG 43
***************************************
consensus_10269#0 TAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCT 3180
consensus_10269#1 TAAAAGAGTGCATTGNCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCT 235
consensus_10269#2 TAAAANA-TGCATTGTCCATGTGCTTATGCTTCTGTANATANACATCCATTTTTCTTTCT 102
***** * ******* ********************* *** ******************
consensus_10269#0 TTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCT 3240
consensus_10269#1 TTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATNTTGAGACTGAAGTTTCTGCCT 295
consensus_10269#2 TTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAAACTGAANTTTCTGCCT 162
************************************** **** ****** *********
consensus_10269#0 TTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGC 3300
consensus_10269#1 TTTTCTAGTCATCGGGGTCATATAATGCTTCTTTNGTTTNCTGTA--------------- 340
consensus_10269#2 TTTTCTANTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGC 222
******* ************************** **** *****
consensus_10269#0 AATGGCATCTGGTGGCATCAATGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3360
consensus_10269#1 ---------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 373
consensus_10269#2 AATGGCATCTGGTGGCATCAATGATCCATATCATGAGTCTTGTNCTGTTTAGGGAGCAAT 282
* * * * * * **
consensus_10269#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3420
consensus_10269#1 AAAAAAAAAAAAA----------------------------------------------- 386
consensus_10269#2 TAGTACCAATCCAGGCTTG----------------------------------------- 301
* * ** *
consensus_10269#0 AAAAAAA 3427
consensus_10269#1 -------
consensus_10269#2 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||