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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10349#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2427 fasta sequence
[CCACTCGCTAGTCCAATCTCGGTCTCTCCCCGCAGCGACGCGAAGGGGAGCAAGGGCAAGAAGCGGAAGCACAAGGACGGGGAGGGGGAGAAGGAGCACGGGAAGAGGTCCAAGGAGAGGAAGGGGGAGGGCGAGGCGGCGGAGGCGAGGCGCGGGGACGACAAGGTGAGGCGGGCGATGGAGGACGAGAGGTTCGCGGCGGCGCGGACCGACCCGAGGTTCCGGGCGATGCGGCGGAAGGAGGCGAAGGTGGAGCTCGACTCGAGGTTCACCAGCATGCTGACGGACCCGAGGTTCTCGTCGTCGTCGGCGCCGGTGGACAAGCACGGCAGGAGGCGCCGCAAGAAGGGTGGCAGGGAGAACCCGATGCTGCAGTACTATCTCAACCAGGAGGAAGAGGAGGAAAAGGAGAAGGCCAAGTTGGTTGAAGAAGAGGAAGAAGAGGGGGACGCAGAAGAGCAGCAAGGGGAAGAAGAGAGCTCCAGTAGCGACGACGACGACGACGATGAGGACGAAGAAGAGGACGATGACGACGAGTACTCTGTCGGCAGTGACATTGCGCATTATTTGATGGGCAGGCATGATGATACACCTATGATTGACAAGGAAACCCATAGGCTTGCTGTTGTTAATATGGACTGGGATCATATTAAGGCAGTTGACCTGTATATGGTGATGACATCTTGCCTCCCAAAAGGTGGGCGAGTCTTATCAGTGTCAGTCTATCCATCAGAATTTGGACTTGAGCGCATGAAAATTGAGTCAACTAAGGGCCCAGCTGCCCTTGTTGATGTCAATGGTAGTGATGGTGAATATAGTGGTGGTGATGATGATGACGACGATGAAGAAGAAGAAGATAGTAGTGACACTGAACATGATTCTGAGGCTGAAAACAACAAGCTACGTACTTATGAGCTAAACAGACTGAGGTATTACTATGCAGTTGTGGTGTGTGATTCCAGTGCAACTGCAAATCACCTGTACATGAATCTTGATGGTACAGAATTATTGAAAACATCAAATGTGTTCGACTTGCAGTTTATTCCTGACTCTATGGAATTTAAACATCCTGCTCGTGATGTTGCTACAGAGGCACCTCCAAGTTACAAGGAGCCTAATTTTGAAACTCGTGCTTTGCAACATAGCAAGGTTAAGCTCACGTGGGACGATGATGAACCAGAACGCAAAAAGGTCTTGAGGCGAAAGTTCACTGATGATCAGTTAGATGATCTTGATATGTACTTAGCAAGTGATGACAGTGCATCAGACGATGAAGGTGCAGATAATCATGGTGACGAGTCTCTACAAAGTGGAGCCAAAAGAAAGTTAACAAGGGAGGAGAGGTTGGCTCTTCTACTACAAGGTGACAAATCCGAGGAGGAACAAACTGATGGCGAGGACATGGAGATAACATTCAACACAGAGCTTGAGGACCTTAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAAACGTAAATCTAGGAAGAGAAGGTCAAAGGATGATGATGATGATGGCTATAGCAGCGAAGATGGCCTGGATGAACATGACGATTTCTTTGATGATGAAATGTCTGATGAAGAAATTAAGCCAAACAAGAAGCAGAAGGCAAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACCCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA-AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTTTGTTATCCTTAATATTTTCGAATATAGTTCTATTATTTTCAGGCTATAAAATTAAATTATGATGGTGGCTTTGTACCA]
[+] EMBL AK071504 [CCACTCGCTAGTCCAATCTCGGTCTCTCCCCGCAGCGACGCGAAGGGGAGCAAGGGCAAGAAGCGGAAGCACAAGGACGGGGAGGGGGAGAAGGAGCACGGGAAGAGGTCCAAGGAGAGGAAGGGGGAGGGCGAGGCGGCGGAGGCGAGGCGCGGGGACGACAAGGTGAGGCGGGCGATGGAGGACGAGAGGTTCGCGGCGGCGCGGACCGACCCGAGGTTCCGGGCGATGCGGCGGAAGGAGGCGAAGGTGGAGCTCGACTCGAGGTTCACCAGCATGCTGACGGACCCGAGGTTCTCGTCGTCGTCGGCGCCGGTGGACAAGCACGGCAGGAGGCGCCGCAAGAAGGGTGGCAGGGAGAACCCGATGCTGCAGTACTATCTCAACCAGGAGGAAGAGGAGGAAAAGGAGAAGGCCAAGTTGGTTGAAGAAGAGGAAGAAGAGGGGGACGCAGAAGAGCAGCAAGGGGAAGAAGAGAGCTCCAGTAGCGACGACGACGACGACGATGAGGACGAAGAAGAGGACGATGACGACGAGTACTCTGTCGGCAGTGACATTGCGCATTATTTGATGGGCAGGCATGATGATACACCTATGATTGACAAGGAAACCCATAGGCTTGCTGTTGTTAATATGGACTGGGATCATATTAAGGCAGTTGACCTGTATATGGTGATGACATCTTGCCTCCCAAAAGGTGGGCGAGTCTTATCAGTGTCAGTCTATCCATCAGAATTTGGACTTGAGCGCATGAAAATTGAGTCAACTAAGGGCCCAGCTGCCCTTGTTGATGTCAATGGTAGTGATGGTGAATATAGTGGTGGTGATGATGATGACGACGATGAAGAAGAAGAAGATAGTAGTGACACTGAACATGATTCTGAGGCTGAAAACAACAAGCTACGTACTTATGAGCTAAACAGACTGAGGTATTACTATGCAGTTGTGGTGTGTGATTCCAGTGCAACTGCAAATCACCTGTACATGAATCTTGATGGTACAGAATTATTGAAAACATCAAATGTGTTCGACTTGCAGTTTATTCCTGACTCTATGGAATTTAAACATCCTGCTCGTGATGTTGCTACAGAGGCACCTCCAAGTTACAAGGAGCCTAATTTTGAAACTCGTGCTTTGCAACATAGCAAGGTTAAGCTCACGTGGGACGATGATGAACCAGAACGCAAAAAGGTCTTGAGGCGAAAGTTCACTGATGATCAGTTAGATGATCTTGATATGTACTTAGCAAGTGATGACAGTGCATCAGACGATGAAGGTGCAGATAATCATGGTGACGAGTCTCTACAAAGTGGAGCCAAAAGAAAGTTAACAAGGGAGGAGAGGTTGGCTCTTCTACTACAAGGTGACAAATCCGAGGAGGAACAAACTGATGGCGAGGACATGGAGATAACATTCAACACAGAGCTTGAGGACCTTAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAAACGTAAATCTAGGAAGAGAAGGTCAAAGGATGATGATGATGATGGCTATAGCAGCGAAGATGGCCTGGATGAACATGACGATTTCTTTGATGATGAAATGTCTGATGAAGAAATTAAGCCAAACAAGAAGCAGAAGGCAAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACTCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAAGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTTTGTTATCCTTAATATTTTCGAATATAGTTCTATTATTTTCAGGCTATAAAATTAAATTATGATGGTGGCTTTGTACCA]
[+] EMBL CF323006 [ AACATCCTGCTCGTGATGTTGCTACAGAGGCACCTCCAAGTTACAAGGAGCCTAATTTTGAAACTCGTGCTTTGCAACATAGCAAGGTTAAGCTCACGTGGGACGATGATGAACCAGAACGCAAAAAGGTCTTGAGGCGAAAGTTCACTGATGATCAGTTAGATGATCTTGATATGTACTTAGCAAGTGATGACAGTGCATCAGACGATGAAGGTGCAGACAATCACGGTGACGAGTCTCTACAAAGTGGAGCCAAAAAAAAGTTAACAAGGGAGGAGAGGTTGGCTCTTCTACTACAAGGTGACAAATCCGAGGAGGAACAAACTGATGGCGAGGATATGGAGATAACATTCAACACAGAGCTTGAGGACCTCAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAA ]
[+] EMBL CB680081 [ AGAGCTTGAGGACCTTAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAAACGTAAATCTAGGAAGAGAAGGTCAAAGGATGATGATGATGATGGCTATAGCAGCGAAGATGGCCTGGATGAACATGACGATTTCTTTGATGATGAAATGTCTGATGAAGAAATTAAGCCAAACAAGAAGCAGAAGGCAAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACCCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCATTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAAGCTTTTTTTTTTat ]
[-] EMBL CB680082 [ AAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACCCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGAAACACAT ]
[-] EMBL CB629498 [ GCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTTGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTT CTTTATGACAATGATCAAGTAGGACAATT ]
[+] EMBL CB629497 [ GGTACCACATGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTTGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTT ]
[+] EMBL CB629499 [ GGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTTGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||